mRNA_H-paniculata_contig581.13406.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: D8LRR6_ECTSI (DUF4149 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRR6_ECTSI) HSP 1 Score: 243 bits (620), Expect = 2.000e-74 Identity = 119/219 (54.34%), Postives = 162/219 (73.97%), Query Frame = 2
Query: 188 RQVRVKVKAEAEQGTSGSVQNTSQDLSVQQGQASVKPAFHNKNIFRVATILATTGLAARGSLLVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSIGAMFIIRGCPLRGRSGVALLLSALFTFFNMAILDPKSTDVMMQRHKLEDEKKTDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDLAIMMPV 844
R++ ++ ++E G SG + D S QQ A ++PA HNKN RVA IL GLA++G++LVPG+L+K +HMV+ +WMGS +W TF AGITM RN+PRQT GK+Q+KLFP YF +F SI A++IIRGCPLR R+GV LL+S T N+ +L+PKST +M++R+KLED+KK D +EYK LG F +HG SSF NL AL+G+FVYAW+LA ++P+
Sbjct: 37 RRMMTAMETKSEAGPSGVQSLSKWDPSAQQ--AFIQPAIHNKNPVRVAAILTAAGLASKGAMLVPGNLAKMVHMVALNAWMGSTLWTTFFAGITMMRNLPRQTFGKLQSKLFPLYFQFNFVSILAIYIIRGCPLRTRAGVTLLVSLFSTLLNLVLLEPKSTSIMLERYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELASVIPI 253
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A6H5KHA9_9PHAE (DUF4149 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA9_9PHAE) HSP 1 Score: 145 bits (366), Expect = 2.280e-38 Identity = 75/131 (57.25%), Postives = 97/131 (74.05%), Query Frame = 2
Query: 200 VKVKAEAEQGTSGSVQNTSQDLSVQQGQASVKPAFHNKNIFRVATILATTGLAARGSLLVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSIGAMFIIRGCPLR 592
++VK EA G SG + D S QQ A ++PA HNKN RVA IL GLA++G++LVPG+L+K +H+V+ +WMGS +W TF AGITM RN+PRQT GK+Q+KLFP YF L+F SI A++IIRGCPLR
Sbjct: 1 MEVKPEA--GPSGVQSLSKWDPSAQQ--AFIQPAIHNKNPVRVAAILTAAGLASKGAMLVPGNLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPLYFQLNFASILAIYIIRGCPLR 127
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A0G4F9E7_VITBC (DUF4149 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F9E7_VITBC) HSP 1 Score: 147 bits (372), Expect = 2.390e-37 Identity = 73/189 (38.62%), Postives = 121/189 (64.02%), Query Frame = 2
Query: 290 VKPAFHNKNIFRVATILATTGLAARGSLLVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYF------LLHFCSIGAMFIIRGCPLRGRSGVALLLSALFTFFNMAILDPKSTDVMMQRHKLEDEKKTDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDLAIMM 838
V PA HN+N R+ +L+T LA+ ++ V L+ F+H++++A+W+GS+++ TF+AGITM RN+PR+T G++Q+KLFP YF L+ + G ++ + VAL++ T N+ +L+PKST++M +R+++ED+ + D EYK+L F +HG SS NL+AL G + W LA ++
Sbjct: 106 VAPAVHNRNSVRLLALLSTLLLASGSTVFVSKQLTLFVHLLAYATWLGSVIYTTFVAGITMFRNLPRKTFGRLQSKLFPLYFQLCTGMLIVLLTTGGASVLPNRAMMANLAVALVM----TLANLFVLEPKSTEIMFKRYEMEDQGRKDDPEYKALAKGFGKFHGLSSLTNLIALCGGVAHGWTLASLI 290
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A7S3RBJ6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RBJ6_9SPIT) HSP 1 Score: 137 bits (346), Expect = 9.630e-35 Identity = 81/186 (43.55%), Postives = 108/186 (58.06%), Query Frame = 2
Query: 281 QASVKPAFHNKNIFRVATILATTGLAARGSLLVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSIGAMF-IIRGCPLRG---RSGVALLLSALFTFFNMAILDPKSTDVMMQRHKLEDEKKTDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDL 826
QA V PA N FR A+I LAA GS + ++ F H++SF S GSM++ TF AGITM +N+PRQT G++Q+KLFP YF LH S+ M +R G R A + LFT N+ L+P+ST VM R+ LE+E K + +EYK +F HG SS NL AL+G ++W L
Sbjct: 3 QAWVPPAIWNTPAFRAASIATALALAAAGSRQLGARMAIFAHLISFGSLFGSMIYTTFFAGITMFKNLPRQTFGRLQSKLFPIYFKLHAASLCVMLGTLRAVASGGSLTRPVYACGSALLFTLLNLFYLEPQSTKVMFTRYDLENEGKQESDEYKVAAKKFGPLHGMSSLANLGALIGVIAHSWWL 188
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A835YZR0_9STRA (DUF4149 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZR0_9STRA) HSP 1 Score: 141 bits (356), Expect = 2.770e-34 Identity = 84/192 (43.75%), Postives = 116/192 (60.42%), Query Frame = 2
Query: 281 QASVK---PAFHNKNIFRVATILATTGLAARGSLLVPGS-LSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLH-FCSIGAMFIIRGCPLRGR----SGVALLLSALFTFFNMAILDPKSTDVMMQRHKLEDEKKTDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDLA 829
QAS K PA HN N RVA ++A GLAARGSL + + F+H++SF +GS ++ TFIAGI M +N+PRQT GK+Q+KLFPAYF L+ C++ + + G G + V L + + N+ +L+P+ST VM+ R++LE+ + EY L F HG SS +NL AL GA YAW LA
Sbjct: 102 QASAKWMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPADAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELENRGEAKGAEYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLA 293
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: W7TXS6_9STRA (DUF4149 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXS6_9STRA) HSP 1 Score: 130 bits (328), Expect = 2.480e-31 Identity = 69/187 (36.90%), Postives = 112/187 (59.89%), Query Frame = 2
Query: 290 VKPAFHNKNIFRVATILATTGLAARGS-LLVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSIGAMFIIR---GCPLRGRSGVALLLSALFTFFNMAILDPKSTDVMMQRHKLEDEKKTDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDLAIMM 838
++PAFHNK R+ +LA +A + S + +P S + +IH++ F + GS+M+ TF+ G+ M +++PRQT G++Q+KLFP YF ++ + G P + +A L+A N L+P ST VM QR+ LE + + + EYK L +F HG SS VNL+ ++G FV+A+ L++M+
Sbjct: 82 IEPAFHNKLSVRILAVLAGISIAMKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALALALQLLTGKTLGLPAKAMRWLAASLAA--ALINSLFLEPASTKVMFQRYALEKQNRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHAYYLSLML 266
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A7S3L6U9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6U9_9STRA) HSP 1 Score: 130 bits (326), Expect = 3.830e-31 Identity = 77/184 (41.85%), Postives = 107/184 (58.15%), Query Frame = 2
Query: 293 KPAFHNKNIFRVATILATTGLAARGS-LLVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLL-HFCSIGAMFIIRGCP--LRGRSGVALLLSALFTFFNMAILDPKSTDVMMQRHKLEDEKK-TDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDLA 829
K HN FR +L LA S +P S +H++SFA+W GS+ + TF+AGITM +N+PRQT GK+QAKLFP YF L F + + + P ++ S AL L+ + T N +L+P ST MM+R++LED+ D +EYK+L F +HG SS NL+AL G +A LA
Sbjct: 68 KKRLHNTAAFRSLALLGALALAGFSSPTALPAKASASLHLLSFATWFGSVAYTTFVAGITMFKNLPRQTFGKLQAKLFPKYFALGSFTLLLQLITLPSLPVTIKMASTKALSLAFVMTLVNQFLLEPMSTSNMMRRYELEDQDGGKDTDEYKTLKASFGKFHGMSSLTNLIALCGGVAHAVYLA 251
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A1Z5KI85_FISSO (DUF4149 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI85_FISSO) HSP 1 Score: 127 bits (319), Expect = 2.180e-30 Identity = 73/186 (39.25%), Postives = 108/186 (58.06%), Query Frame = 2
Query: 293 KPAFHNKNIFRVATILAT---TGLAARGSL-LVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSIGAMFIIRGCPLRGRSGVALLLSA-------LFTFFNMAILDPKSTDVMMQRHKLEDEKKTDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYA 817
KP HN FR +L+ G +++ L L+P + +H +SFA+W G++ + TF+AGITM +N+PRQT GK+QAKLFP YF L ++ A+ +I L+ +G A SA L T N L+PKST MM+R++LED+ + + + YK+L F +HG SS NL+ L +A
Sbjct: 41 KPRLHNTATFRTIALLSALLAAGFSSKSPLKLLPAQVLGSVHTISFATWFGTVAYTTFVAGITMFKNLPRQTFGKLQAKLFPKYFALSSFTL-ALQLITLKSLKAMTGKAAHSSAKALGVALLMTLINQFFLEPKSTSNMMERYELEDKGEQESDRYKTLKANFGKFHGMSSLTNLIGLCAGVAHA 225
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A7S2EYH8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EYH8_TRICV) HSP 1 Score: 124 bits (310), Expect = 1.480e-29 Identity = 78/182 (42.86%), Postives = 111/182 (60.99%), Query Frame = 2
Query: 308 NKNIFRVATILATTGLAA--RGSLL--VPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSIGAMFIIR-GCP-LRGRSGVALLLSAL-FTFFNMAILDPKSTDVMMQRHKLEDEKK-TDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDLA 829
N NIFR A+ILA GLA GS L + + + +H++SFA+W G+M + TFI GIT +N+PRQT G++Q+KLFP YF L SI I R P L + A L +AL T N+ L+PKST +M +R++LE + + + ++YK L F +HG SS NL+AL GA + + +A
Sbjct: 10 NNNIFRSASILAALGLAGYVSGSPLNTISSATAGTVHILSFATWFGTMFYTTFIFGITAFKNLPRQTFGRLQSKLFPKYFNLCAISIVLQLITRKSMPFLASKKVTAALGTALAMTLLNLFYLEPKSTKIMFERYELEGQPEGKESDKYKELASAFGKFHGISSLTNLIALCGAVAHGFYIA 191
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A7S2I6I8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I6I8_9STRA) HSP 1 Score: 125 bits (315), Expect = 3.430e-29 Identity = 78/190 (41.05%), Postives = 112/190 (58.95%), Query Frame = 2
Query: 305 HNKNIFRVATILATTGLA--ARGS--LLVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSIGAMFIIRGCP-----LRGRSGVALLLSALFTFFNMAILDPKSTDVMMQRHKLEDEKK-TDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDLAIMMPV 844
HN FR + +LAT G+A A GS + V S IH+++FA+W GSM + TFI GITM +N+PR+T GK+Q+KLFP YF L C+I + I + ++ VAL +S + T N+ L+P ST +M +R+ LE+ D ++YK L F +HG SS NL+AL GA + + LA + V
Sbjct: 109 HNTAFFRFSAMLATIGVASYAIGSSPVKVSAKASATIHILAFATWFGSMAYTTFIGGITMFKNLPRKTFGKLQSKLFPIYFNL--CAITILLQILTLNFLPTVVTKKATVALGVSLVMTVLNLFYLEPTSTKIMFERYALEETSGGKDTDKYKKLAANFGKFHGMSSLTNLIALCGAIAHGFYLATALVV 296 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig581.13406.1 >prot_H-paniculata_contig581.13406.1 ID=prot_H-paniculata_contig581.13406.1|Name=mRNA_H-paniculata_contig581.13406.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp MVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSIback to top mRNA from alignment at H-paniculata_contig581:3441..7043- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig581.13406.1 ID=mRNA_H-paniculata_contig581.13406.1|Name=mRNA_H-paniculata_contig581.13406.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3603bp|location=Sequence derived from alignment at H-paniculata_contig581:3441..7043- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig581:3441..7043- >mRNA_H-paniculata_contig581.13406.1 ID=mRNA_H-paniculata_contig581.13406.1|Name=mRNA_H-paniculata_contig581.13406.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at H-paniculata_contig581:3441..7043- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |