prot_H-paniculata_contig5804.13400.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5804.13400.1
Unique Nameprot_H-paniculata_contig5804.13400.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length68
Homology
[Close]
BLAST of mRNA_H-paniculata_contig5804.13400.1 vs. uniprot
Match: A0A6H5L4C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C8_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 3.060e-21
Identity = 43/70 (61.43%), Postives = 58/70 (82.86%), Query Frame = 0 
Query:    1 KCVRECFLEAVASARNPLVPALSIMKTISSARP--SCPLHASWYAWMRKALERLAVEVLTNLPVAVRALH 68
            +CVR+CFLEAVASARNPLVP+L ++ ++S+AR   SCPLHASW+  M+  LE+L ++VLTNLPV+ RA +
Sbjct:  821 RCVRDCFLEAVASARNPLVPSLGLLSSVSTARKEASCPLHASWFLLMQNTLEKLVIQVLTNLPVSARAFN 890
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5804.13400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L4C8_9PHAE3.060e-2161.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5804contigH-paniculata_contig5804:11480..12975 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5804.13400.1mRNA_H-paniculata_contig5804.13400.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5804 11479..12975 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5804.13400.1 ID=prot_H-paniculata_contig5804.13400.1|Name=mRNA_H-paniculata_contig5804.13400.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
KCVRECFLEAVASARNPLVPALSIMKTISSARPSCPLHASWYAWMRKALE
RLAVEVLTNLPVAVRALH
back to top