mRNA_H-paniculata_contig5799.13391.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5799.13391.1
Unique NamemRNA_H-paniculata_contig5799.13391.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5799.13391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5799contigH-paniculata_contig5799:1476..4994 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score68.2
Seed ortholog evalue5.8e-09
Seed eggNOG ortholog2880.D7FQW6
Preferred nameRIPK1
KEGG koko:K02861,ko:K04424
KEGG Pathwayko04010,ko04064,ko04210,ko04217,ko04620,ko04621,ko04622,ko04623,ko04668,ko05160,ko05169,map04010,map04064,map04210,map04217,map04620,map04621,map04622,map04623,map04668,map05160,map05169
Hectar predicted targeting categoryother localisation
GOsGO:0000165,GO:0000187,GO:0001817,GO:0001819,GO:0001932,GO:0001934,GO:0001959,GO:0002218,GO:0002221,GO:0002224,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002756,GO:0002757,GO:0002758,GO:0002761,GO:0002763,GO:0002764,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005102,GO:0005123,GO:0005126,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006508,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006919,GO:0006950,GO:0007154,GO:0007165,GO:0007166,GO:0007249,GO:0007254,GO:0007257,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010008,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0010648,GO:0010803,GO:0010939,GO:0010940,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0012505,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016579,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0019538,GO:0019899,GO:0019904,GO:0022607,GO:0022898,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030162,GO:0030163,GO:0031090,GO:0031098,GO:0031264,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031410,GO:0031625,GO:0031982,GO:0032147,GO:0032239,GO:0032268,GO:0032270,GO:0032409,GO:0032412,GO:0032677,GO:0032680,GO:0032757,GO:0032760,GO:0032813,GO:0032872,GO:0032874,GO:0032879,GO:0032991,GO:0033209,GO:0033554,GO:0033674,GO:0034097,GO:0034138,GO:0034612,GO:0034762,GO:0034765,GO:0035556,GO:0035666,GO:0036211,GO:0036289,GO:0042221,GO:0042325,GO:0042327,GO:0042802,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043122,GO:0043123,GO:0043124,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043235,GO:0043269,GO:0043280,GO:0043281,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043506,GO:0043507,GO:0043549,GO:0043933,GO:0044070,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044440,GO:0044444,GO:0044445,GO:0044446,GO:0044459,GO:0044464,GO:0044877,GO:0045088,GO:0045089,GO:0045121,GO:0045595,GO:0045597,GO:0045637,GO:0045639,GO:0045649,GO:0045651,GO:0045859,GO:0045860,GO:0045862,GO:0045893,GO:0045935,GO:0045937,GO:0045944,GO:0046328,GO:0046330,GO:0046777,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051090,GO:0051091,GO:0051092,GO:0051094,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051291,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051403,GO:0051716,GO:0052547,GO:0052548,GO:0060255,GO:0060544,GO:0060545,GO:0060548,GO:0060759,GO:0065003,GO:0065007,GO:0065009,GO:0070227,GO:0070231,GO:0070265,GO:0070266,GO:0070302,GO:0070304,GO:0070513,GO:0070646,GO:0070647,GO:0070848,GO:0070887,GO:0070926,GO:0071310,GO:0071345,GO:0071356,GO:0071363,GO:0071550,GO:0071704,GO:0071840,GO:0071887,GO:0071900,GO:0071902,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0097190,GO:0097191,GO:0097300,GO:0097342,GO:0097343,GO:0097435,GO:0097527,GO:0097708,GO:0098588,GO:0098589,GO:0098796,GO:0098797,GO:0098805,GO:0098857,GO:0140096,GO:1900407,GO:1900409,GO:1901026,GO:1901031,GO:1901033,GO:1901099,GO:1901564,GO:1901565,GO:1901575,GO:1902041,GO:1902042,GO:1902105,GO:1902107,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902680,GO:1902882,GO:1902884,GO:1903201,GO:1903205,GO:1903209,GO:1903506,GO:1903508,GO:1903555,GO:1903557,GO:1903706,GO:1903708,GO:1903959,GO:1905206,GO:1990000,GO:2000026,GO:2000112,GO:2000116,GO:2000377,GO:2000379,GO:2001023,GO:2001025,GO:2001038,GO:2001040,GO:2001056,GO:2001141,GO:2001233,GO:2001234,GO:2001235,GO:2001236,GO:2001237,GO:2001238,GO:2001239,GO:2001240
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
EC2.7.11.1,2.7.11.25
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons2
Model size1074
Cds size684
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5799.13391.1prot_H-paniculata_contig5799.13391.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5799 1476..2159 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930629.1498914-CDS-H-paniculata_contig5799:1475..21591622930629.1498914-CDS-H-paniculata_contig5799:1475..2159Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5799 1476..2159 -
1691481379.9725747-CDS-H-paniculata_contig5799:1475..21591691481379.9725747-CDS-H-paniculata_contig5799:1475..2159Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5799 1476..2159 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930629.1645732-UTR-H-paniculata_contig5799:2159..21681622930629.1645732-UTR-H-paniculata_contig5799:2159..2168Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5799 2160..2168 -
1691481379.9853117-UTR-H-paniculata_contig5799:2159..21681691481379.9853117-UTR-H-paniculata_contig5799:2159..2168Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5799 2160..2168 -
1622930629.1863804-UTR-H-paniculata_contig5799:4614..49941622930629.1863804-UTR-H-paniculata_contig5799:4614..4994Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5799 4615..4994 -
1691481379.9937901-UTR-H-paniculata_contig5799:4614..49941691481379.9937901-UTR-H-paniculata_contig5799:4614..4994Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5799 4615..4994 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5799.13391.1

>prot_H-paniculata_contig5799.13391.1 ID=prot_H-paniculata_contig5799.13391.1|Name=mRNA_H-paniculata_contig5799.13391.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
MDLTTIIITIFTIADELIKLCKEVKQCQREAVRIELRVHNLVGTLESAAG
AFCGDIAFEKKLLKLRKFMNTLSPLLEKANYCTNMMDKAKQMANVSTLAK
ALQREEAILSAMCDDLGLAMLPSIAEKLNELPDKLEARVSVAMEAYFSVA
LQAAMQEQEDKTEKMLRRTISAYVRQLLVENDSSHTEGTCRGTTSGTGEN
ISKTTSRPGHNGGSSRGVVGSGDTVGAG
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mRNA from alignment at H-paniculata_contig5799:1476..4994-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5799.13391.1 ID=mRNA_H-paniculata_contig5799.13391.1|Name=mRNA_H-paniculata_contig5799.13391.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3519bp|location=Sequence derived from alignment at H-paniculata_contig5799:1476..4994- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCCCTGTTATGACATTCAAAATCGTTGGAGCAGGAGATATAGCGGTGCA
ATTTACCGAGATGATTTGAAATCTCAAAAGACGATCCGTTGTCAGTTGCA
CAAAAAGTGTTCTTTGATGTCGTGTCCCGCCGTCGTTGACAATCCGATCT
CCCATACCGTTATGTTTTGATGATGTATATACGTTCCCCACCTCACCATC
ACGATCCATTGAAATTTCGCCGGTTGTGCTCTGCACTTGCCACAAGCGCT
GTTCGTGTGTTTTGTGTTAGGTTAAGGTCTACTGGGACAGTGTGAAGATC
TGGTTCAGTGCATCATCCGCACCTGATCAACGTTCTTCCTGATCAACGAT
TGATTAAAGACGAAGTGAAGTTCAAGCAAGGTATGTGGTTGCATGCGCAT
GTTCGGAGGACGGTGTTGTTTCGTTGATGAGGGCGCTTAGAAGACCTTGC
ACCAGTTGGTGCCGTTTGTGCCCTTTGTTGCCTCAGCAGACAGAAGGAGA
TAGCCAAAGGAGGGCGTGACAGGATGGATTTCCCAATTGGTACAACCCAA
ATGTGCGATGACGATCGCTGCCTCGTCTATGAACATTTTCCTTTCCACCC
CGGCATATGCAACCTCTGTTAACATACCTCGTAAGTGCTGTGAGGGAAGG
AGCTTAATCCCACGACTAAGTATCAAGTATGAAGTCCCGATTTAGATCCC
CGAAGAACTCGGGTTAATGATCACGTCGGTCTTCCCTCGGTTCTAAGCTC
AAGAACCGAGGGAATTGTGGGGTAGCCGTTGTACGAGACTTGGCCGAGTT
GACGCTCGGTTTTAGACTGCCCTTTGAGTAGCAGAATCCTCACTCGTTGA
AACCCTTGATCACACTTGCGCCCGGTCATTGGCAATGGGTTACCCCACTA
GCCGTGCCCTACCCGTTAGGGCTTAGACTCGTTCGTCTATGAACATATGA
ATATATGAATAGCTTGACCTTCCAAAGGTCGAGGAGATGTGCGGAGAGAT
TAAAGGACATTCAGAGAGTCGCTGTGGGACATTTATGTACTTATCCTACT
CACTCTCTTGACTCAAACTTAATTAGAACAACAGACATAAGTCGTGAATC
CGTGCACCTCCATCCTTCTGGTGTGCTGCAGCTTCCGGCGCGTTGATGCC
ATGGGCAGGTGACTCCAAATGATGTGTATGAGTGCTAGTTGCTTCTGACC
TATGTGTTCCCGTGTTCCGCCTGACAACTCTACTAAATAGATGCAAAGTA
TACTGAGTAGCTCTTAACATGCGTAGTGTTTACTATCCGCTTTTGACCTG
TATAGTGCTGCACAGTACAGTAGTTCGTGGGGGTCACTGAGGTACCAGTG
TTGCGAGCGATCGTATTCTCACGTTGTAAATAAAGCCGTTTTGTTTGATA
GCCCCAGCCATCCCGTCCGCCCCCACCTAGACTCTATCATGGTATTTTCG
ACCTTTCCTGAACCTACTGTACAGACAGTCAAAAACCATGACACATGTAC
ATATCATCGCAATGTGCCTGTTGCGTGATAGACGTACGTTTGGATCGGGG
TATTAGACGTGATATCAACTCGTGTAGCACCACCGAAAATCGTCAAAAAA
AAGGCGTTTCCAACGGCACTGGCTTTGACACATGTTCGATGGCTTGATGC
CGGAAACAAGTTGGAGCCGCCCCCAGATATCGTGGAATGCGACCAACCAT
GGCAGGGTAGTTCTCGATGCGATCCCAACACCACACTACTTTTTTGTGCG
GTGAGACGATCTTTTGTTTTTTTTTTGCTCGCCGCGAAGGTCGAGTGTCT
TGTCGTGAAGTGGATAAATGTGAACGAAATTCGTTTTCAAGAAAAACGAA
TGTTTCTGTTCCAAAGCATCTGGGTTGAATCTTATCGGACAAACGAGTTA
TCTGCAGATGGTAGGTGTGGGATTTTTCTTGTGCATGAGCATTATATCCA
ACTCGTTCAGTGACCAGGTTGCAAAAAAGAAAGGACTTGACAAACACCAT
AACTGAAACACGGACAGCCTCAAAATTAAACGTACAGAGTGGCAGAGTAC
AAGCGCACTAGCTCGGACATTAGACCTTGCTCCGTTAGACAATTCCGGCC
TTTGTTTGACGCAAATTGATTCCATGTTGGGGGAAACACAGCATTTCATG
TCAAGGTTTAGTTGCAAAGAATTCCGGTTTTGACCGTTTTTCTGTCGCTA
GAGTGCACGACAAATATCTTTAGTCCTCGATTTCTGGGCTGATTCAACCC
AAACCAAGTATATCATGTTCAGTTGATCAAGAGCTACGATCCGACCTACG
TTTTGTTGCCCGGCGGCAGTCAAGCTCTGACTCTCACGACGGGCACTTCT
GTATTAATTTGTCATGACCCCCAACAAATACTCCGCTCTTTTTCTTCTTT
TTTTTTTAACCCCCGGAAGGCTAAGGCAAAAACCTTTATCCGATGCTTCC
ATACCGAAGTATTTCTACATTTCCTTGTACAGAACAGAGTTATTTGCCCC
CACTAAAAGACCTCTGACTAGACTTCCAGTCATGCTTAGTTCATGAGCTA
CCCTACCCGTTCGGACGTAGGTCCGTCATACTCCACTCTTAGGCCATGTC
GTATCGAGAAACGTAAACGCACTTTTCGTTTCCAAGAAAACGAAATTTCT
CTGTGATTAGTCGAGTGAACCTTTGATCTATCGTAGATATATATTTTACT
ATCAAATACTTGCAGGGACGCCTGTGTGAGTGGATAAGGCAATCCCATCT
GTTACGCTCGCTCTAGTACGCGCTAATGTGCATCACTTTCCGTTCGACCC
AATCAACCACCTTTGATCGGTTCCAGTCTGATGCGATGGATCTGACAACG
ATAATCATCACGATTTTCACCATTGCCGACGAGCTTATCAAGCTTTGCAA
GGAGGTGAAGCAATGCCAGCGTGAGGCCGTGCGCATTGAATTACGGGTCC
ATAACCTAGTTGGCACGCTGGAGAGCGCGGCTGGGGCCTTCTGCGGGGAC
ATTGCTTTCGAGAAGAAACTCTTGAAGTTGCGTAAATTCATGAATACCCT
CTCCCCTCTCCTGGAAAAGGCCAACTATTGCACCAATATGATGGACAAGG
CCAAGCAAATGGCCAACGTGTCGACCTTGGCGAAAGCTCTCCAAAGAGAA
GAGGCCATCCTTAGCGCTATGTGTGACGATCTGGGACTGGCGATGTTGCC
GTCTATTGCTGAAAAACTGAACGAGCTGCCGGATAAACTGGAGGCCCGTG
TATCGGTCGCGATGGAAGCCTATTTTTCGGTGGCGCTGCAGGCTGCCATG
CAAGAGCAAGAAGACAAGACAGAAAAGATGCTCAGGAGGACTATCTCGGC
GTATGTACGCCAGCTACTCGTAGAAAATGACTCCAGTCATACGGAAGGGA
CATGCCGGGGCACTACTTCAGGCACCGGTGAAAATATTAGCAAGACCACG
AGTAGGCCAGGACACAATGGTGGTTCCAGCCGAGGTGTCGTAGGGAGCGG
TGACACGGTCGGGGCCGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig5799:1476..4994-

>mRNA_H-paniculata_contig5799.13391.1 ID=mRNA_H-paniculata_contig5799.13391.1|Name=mRNA_H-paniculata_contig5799.13391.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1368bp|location=Sequence derived from alignment at H-paniculata_contig5799:1476..4994- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATCTGACAACGATAATCATCACGATTTTCACCATTGCCGACGAGCT
TATCAAGCTTTGCAAGGAGGTGAAGCAATGCCAGCGTGAGGCCGTGCGCA
TTGAATTACGGGTCCATAACCTAGTTGGCACGCTGGAGAGCGCGGCTGGG
GCCTTCTGCGGGGACATTGCTTTCGAGAAGAAACTCTTGAAGTTGCGTAA
ATTCATGAATACCCTCTCCCCTCTCCTGGAAAAGGCCAACTATTGCACCA
ATATGATGGACAAGGCCAAGCAAATGGCCAACGTGTCGACCTTGGCGAAA
GCTCTCCAAAGAGAAGAGGCCATCCTTAGCGCTATGTGTGACGATCTGGG
ACTGGCGATGTTGCCGTCTATTGCTGAAAAACTGAACGAGCTGCCGGATA
AACTGGAGGCCCGTGTATCGGTCGCGATGGAAGCCTATTTTTCGGTGGCG
CTGCAGGCTGCCATGCAAGAGCAAGAAGACAAGACAGAAAAGATGCTCAG
GAGGACTATCTCGGCGTATGTACGCCAGCTACTCGTAGAAAATGACTCCA
GTCATACGGAAGGGACATGCCGGGGCACTACTTCAGGCACCGGTGAAAAT
ATTAGCAAGACCACGAGTAGGCCAGGACACAATGGTGGTTCCAGCCGAGG
TGTCGTAGGGAGCGGTGACACGGTCGGGGCCGGGATGGATCTGACAACGA
TAATCATCACGATTTTCACCATTGCCGACGAGCTTATCAAGCTTTGCAAG
GAGGTGAAGCAATGCCAGCGTGAGGCCGTGCGCATTGAATTACGGGTCCA
TAACCTAGTTGGCACGCTGGAGAGCGCGGCTGGGGCCTTCTGCGGGGACA
TTGCTTTCGAGAAGAAACTCTTGAAGTTGCGTAAATTCATGAATACCCTC
TCCCCTCTCCTGGAAAAGGCCAACTATTGCACCAATATGATGGACAAGGC
CAAGCAAATGGCCAACGTGTCGACCTTGGCGAAAGCTCTCCAAAGAGAAG
AGGCCATCCTTAGCGCTATGTGTGACGATCTGGGACTGGCGATGTTGCCG
TCTATTGCTGAAAAACTGAACGAGCTGCCGGATAAACTGGAGGCCCGTGT
ATCGGTCGCGATGGAAGCCTATTTTTCGGTGGCGCTGCAGGCTGCCATGC
AAGAGCAAGAAGACAAGACAGAAAAGATGCTCAGGAGGACTATCTCGGCG
TATGTACGCCAGCTACTCGTAGAAAATGACTCCAGTCATACGGAAGGGAC
ATGCCGGGGCACTACTTCAGGCACCGGTGAAAATATTAGCAAGACCACGA
GTAGGCCAGGACACAATGGTGGTTCCAGCCGAGGTGTCGTAGGGAGCGGT
GACACGGTCGGGGCCGGG
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