mRNA_H-paniculata_contig5795.13386.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5795.13386.1
Unique NamemRNA_H-paniculata_contig5795.13386.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5795.13386.1 vs. uniprot
Match: A0A225ULV3_9STRA (Retrotransposon protein, Ty1-Copia subclass (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225ULV3_9STRA)

HSP 1 Score: 196 bits (498), Expect = 3.990e-56
Identity = 120/337 (35.61%), Postives = 185/337 (54.90%), Query Frame = 1
Query:    1 IKRLRSDQRGEYTGKPFRQFCAENGIKQEFSPAYTPQQNGVAERSWRNVFEMARANMITANMGRRYWAEAMRSAVYCLNRAPTRPRNGGMPYEKWHGETPKLDHVRVLDCTTYVMFHVRDWSP-IRIRARAKENREEDPGATARVAKVEN---TGNLAGAVSKGKPNSAAEALNGPAAEKWRAAMEEEWGALVGNGTWESEDPGRLPAGRKAIGTKWIFNRKLMEDGSVARYKPRLVAQGFSQVEGEDFFEAGAPVARMSTLRTVFSPAAKHDFELEGMDVDAAYLNTPEEEDLFDKPPPEFSLFYRDIPFVRRQRESLYGLKQSGRNWDKLLTIFL 999
            +++L SD  GEY  + F++F A NGI Q  +  YTP+QNG+AE  +R +F+  R  +I +N  ++ WAEA+ S VY  NR     R    P+E W+G  P + H RV     YV    +  +  I+ R R+ + ++ D  +   +  +E     GNLA +    +P +  EA++ P A +W+ A+++E  +L+ N TW       LP G++A+ ++W+F  K   DGS+ R K R V  G  QV   DF E  APV R+ +LR + +     D E   MDV+ A+LN    E+++ KPP    +  ++  +V +  +SLYGLKQ+ R W K LT FL
Sbjct:   45 LRKLTSDDGGEYLAEEFKEFGATNGIDQHTTSTYTPEQNGMAEVRFRILFDKVRTVLIDSNSPKQLWAEALLSVVYLQNRTMN-SRTQKTPFEIWYGFAPDVSHFRVFGSLAYVYLPTKAATAGIKPRGRSIKRQKLDYRSARGIFNIEAKTLAGNLAASGIATEPKTYNEAVSRPDAREWKEAIDKEMASLIANKTWTVMP---LPTGKRALSSRWLFKIKYNSDGSIERKKARFVVIGCQQVRHIDFDEIFAPVVRLESLRVLLAIVCIEDLECHQMDVETAFLNGDLTEEVYIKPPQGLDMDGKE-EWVCKLHKSLYGLKQAPRAWHKALTSFL 376          
BLAST of mRNA_H-paniculata_contig5795.13386.1 vs. uniprot
Match: A0A2H9ZYF2_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZYF2_9ASPA)

HSP 1 Score: 195 bits (496), Expect = 3.130e-52
Identity = 128/346 (36.99%), Postives = 194/346 (56.07%), Query Frame = 1
Query:    1 IKRLRSDQRGEYTGKPFRQFCAENGIKQEFSPAYTPQQNGVAERSWRNVFEMARANMITANMGRRYWAEAMRSAVYCLNRAPTRPRNGGMPYEKWHGETPKLDHVRVLDCTTYVMFHVRDWSPIRIRARAKENR-------EEDPG------ATARVAKVENTGNLAGAVSKGKPNSAAEALNGPAAEKWRAAMEEEWGALVGNGTWESEDPGRLPAGRKAIGTKWIFNRKLMEDGSVARYKPRLVAQGFSQVEGEDFFEAGAPVARMSTLRTVFSPAAKHDFELEGMDVDAAYLNTPEEEDLFDKPPPEFSLFYRDIPFVRRQRESLYGLKQSGRNW-DKLLTIF 996
            I+ LR+D+  E+    F +FC  NGIK++ + +YTPQQNGVAER  R + EMAR+ +   N+   +WAEA+ + V+ LN +PT+      PYE W+G  P + ++RV  C  Y   HV   + +R +  +K  +       +E  G       T ++    +      A    KP    EA++    E+W+ +MEEE  A+  N TW   D   LP G+ AIG KW+F  K   DGSV +YK RLV +G++Q  G D+FE  +PVARM T+RTV S AA +++ +   DV +A+LN    ED++ + P  F +  +    V + +++LYGLKQ+ R W +K+ + F
Sbjct:  374 IQILRTDRGSEFCSNEFTKFCQLNGIKRQLTASYTPQQNGVAERKNRTIVEMARSMLKAKNLPISFWAEAVATTVHLLNISPTKAVWNSTPYEAWYGVKPNVSNLRVFGCIVYA--HVN--TEVRQKFDSKSTKCIFIGYSQETKGYRVYNPITKQLYVSRDVIFDENACWDWKPTCFEEAIH---REEWKQSMEEEISAINKNKTWALTD---LPEGKAAIGLKWVFRVKYNVDGSVHKYKARLVVKGYAQQAGIDYFETFSPVARMETIRTVLSLAAHYNWNVYQFDVKSAFLNGDLFEDVYVEQPQGFIIQGKQDK-VYKLKKALYGLKQAPRAWYEKIDSYF 708          
BLAST of mRNA_H-paniculata_contig5795.13386.1 vs. uniprot
Match: A0A438HFL3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HFL3_VITVI)

HSP 1 Score: 193 bits (491), Expect = 1.060e-51
Identity = 131/361 (36.29%), Postives = 188/361 (52.08%), Query Frame = 1
Query:    1 IKRLRSDQRGEYTGKPFRQFCAENGIKQEFSPAYTPQQNGVAERSWRNVFEMARANMITANMGRRYWAEAMRSAVYCLNRAPTRPRNGGMPYEKWHGETPKLDHVRVLDCTTYVMFHVRDWSPIRIRARAK-----ENREEDPGATARVAK------------------VENTGNLAGAVSKGKPNSAAE----ALNGPAAEKWRAAMEEEWGALVGNGTWESEDPGRLPAGRKAIGTKWIFNRKLMEDGSVARYKPRLVAQGFSQVEGEDFFEAGAPVARMSTLRTVFSPAAKHDFELEGMDVDAAYLNTPEEEDLFDKPPPEFSLFYRDIPFVRRQRESLYGLKQSGRNWDKLLTIFLL 1002
            +K LRSD  GEY    F ++CA  GI+ E +   TPQQNGVAER  R + E AR+  + A + + +WA+A+ +A Y +NR P+ P    +P E W G+  K  H++V  C +YV  H+   +  ++ A++K        +E  G  + V                     E+T    G   K   NS  E    AL    + KW  AM++E  +L+GN TWE  +   LP G+KA+  KW++  K   DGS  RYK RLV +GF Q EG D+ E  +PV +MST+R V    A  +  LE +DV  A+L+   EEDL+   P  F +  ++   V + R+SLYGLKQ+ R W K   I  +
Sbjct:  387 VKCLRSDNGGEYIDGGFSEYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYV--HIDSDARSKLDAKSKICFFIGYGDEKFGYRSTVVSDVTEIDQKKSEFVNLDELTESTVQKGGEEDKENVNSQPECYDEALQDENSSKWELAMKDEMDSLLGNQTWELTE---LPVGKKALHNKWVYRIKNEHDGS-KRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQEN-LVCKLRKSLYGLKQAPRQWYKKFDILCI 740          
BLAST of mRNA_H-paniculata_contig5795.13386.1 vs. uniprot
Match: A0A438K0F0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438K0F0_VITVI)

HSP 1 Score: 192 bits (488), Expect = 4.070e-51
Identity = 130/362 (35.91%), Postives = 189/362 (52.21%), Query Frame = 1
Query:    1 IKRLRSDQRGEYTGKPFRQFCAENGIKQEFSPAYTPQQNGVAERSWRNVFEMARANMITANMGRRYWAEAMRSAVYCLNRAPTRPRNGGMPYEKWHGETPKLDHVRVLDCTTYVMFHVRDWSPIRIRARAK---------ENREEDPGATARVAKV--------------ENTGNLAGAVSKGKPNSAA------EALNGPAAEKWRAAMEEEWGALVGNGTWESEDPGRLPAGRKAIGTKWIFNRKLMEDGSVARYKPRLVAQGFSQVEGEDFFEAGAPVARMSTLRTVFSPAAKHDFELEGMDVDAAYLNTPEEEDLFDKPPPEFSLFYRDIPFVRRQRESLYGLKQSGRNWDKLLTIFL 999
            +K LRSD  GEY    F ++CA  GI+ E +   TPQQNGVAER  R + E AR+  + A + + +WA+A+ +A Y +NR P+ P    +P E W G+  K  H++V  C +YV  H+   +  ++ A++K         E        T+ V ++              E+T    G   K   NS        EAL    + KW  AM++E  +L+GN TWE  +   LP G+KA+  KW++  K   DG+  RYK RLV +GF Q EG D+ E  +PV +MST+R V    A  +  LE +DV  A+L+   EEDL+   P  F +  ++   V + R+SLYGLKQ+ R W K    F+
Sbjct:  446 VKCLRSDNGGEYIDGGFSEYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYV--HIDSDARSKLDAKSKICFFIGYGDEKFGYRSTITSDVTEIDQKKSEFVNLDELTESTVQKGGEEDKENVNSQVDLKCYDEALQDENSSKWELAMKDEMDSLLGNQTWELTE---LPVGKKALHNKWVYRIKNEHDGT-KRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQEN-LVCKLRKSLYGLKQAPRQWYKKFDNFM 800          
BLAST of mRNA_H-paniculata_contig5795.13386.1 vs. uniprot
Match: A0A4Y9ZRJ7_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZRJ7_9AGAM)

HSP 1 Score: 191 bits (486), Expect = 6.920e-51
Identity = 131/348 (37.64%), Postives = 181/348 (52.01%), Query Frame = 1
Query:    1 IKRLRSDQRGEYTGKPFRQFCAENGIKQEFSPAYTPQQNGVAERSWRNVFEMARANMITANMGRRYWAEAMRSAVYCLNRAPTRPRNGGMPYEKWHGETPKLDHVRVLDCTTYVMFHVRD---WSPIRIRARAKENREEDP-----GATARVAKV------ENTGNLAGAVSKGKPNSAAEALNGPAAEKWRAAMEEEWGALVGNGTWESEDPGRLPAGRKAIGTKWIFNRKLMEDGSVARYKPRLVAQGFSQVEGEDFFEAGAPVARMSTLRTVFSPAAKHDFELEGMDVDAAYLNTPEEEDLFDKPPPEFSLFYRDIPFVRRQRESLYGLKQSGRNWDKLLTIFLL 1002
            I+RLR+D  GEY  K   ++ AE GI  E +  Y+P Q GVAE     + E   A +    + R  W E + + VY  N  PT   +G  P++ WHG  P + H+R   C  + +   +    W    ++       E+       G T R+ K+      EN   LA       P +  EA+ GP  EKW +AM+EE+ AL+  GTWE     RLPAGRKAIG  W +  K   +G+  RY+ RLVAQGFSQ  G DF E  +PVAR  + R VF+  A   +  E +DV +AYLN   ++++F   P  F +   +I  V R  +S+YGLKQSGR W+K+L   LL
Sbjct:  556 IRRLRADXGGEYVSKEMEEYLAEAGIILELTAPYSPAQXGVAEXLNCTIVERXIAVVHQTGLLRFLWPEVVSTQVYLKNLGPTTALDGKTPFKVWHGFKPSVRHLRAFGCKAFGLIPKQKRTKWDAKSVQCVLIGYNEDSAYRLWHGPTRRIIKLRDVEFFENDFPLA-------PKTYREAVWGPDREKWESAMQEEYDALLKTGTWEKV---RLPAGRKAIGFCWTYKVKHDANGNPVRYRARLVAQGFSQRPGVDFNETHSPVARFESFRLVFALVACFGWLFEQVDVKSAYLNGTLDKEIFMHQPEGF-ISPDEIDLVLRLLKSIYGLKQSGRVWNKVLDGELL 892          
BLAST of mRNA_H-paniculata_contig5795.13386.1 vs. uniprot
Match: A0A438CLT8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CLT8_VITVI)

HSP 1 Score: 190 bits (483), Expect = 1.360e-50
Identity = 128/366 (34.97%), Postives = 186/366 (50.82%), Query Frame = 1
Query:    1 IKRLRSDQRGEYTGKPFRQFCAENGIKQEFSPAYTPQQNGVAERSWRNVFEMARANMITANMGRRYWAEAMRSAVYCLNRAPTRPRNGGMPYEKWHGETPKLDHVRVLDCTTYVMFHVRDWSPIRIRARAK--------------------ENREEDPGATARVAKVENTG-------------NLAGAVSKGKPNSAAEALNGPAAEKWRAAMEEEWGALVGNGTWESEDPGRLPAGRKAIGTKWIFNRKLMEDGSVARYKPRLVAQGFSQVEGEDFFEAGAPVARMSTLRTVFSPAAKHDFELEGMDVDAAYLNTPEEEDLFDKPPPEFSLFYRDIPFVRRQRESLYGLKQSGRNWDKLLTIFL 999
            +K LRSD  GEY    F ++CA  GI+ E +   TPQQNGVAER  R + E AR+  + A + + +WA+A+ +A Y +NR P+ P    +P E W G+  K  H++V  C +YV  H+   +  ++ A++K                    EN       +  VA+V  +              N       G+     EAL    + KW  AM++E  +L+GN TWE  +   LP G+KA+  KW++  K   DGS  RYK RLV +GF Q E  D+ E  +PV +MST+R V    A  +  LE +DV  A+L+   EEDL+   P  F +  ++   V + R+SLYGLKQ+ R W K    F+
Sbjct:  345 VKSLRSDNGGEYIDGGFSEYCAAQGIRMEKTFLGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYV--HIDSDARSKLDAKSKYVFSSAMVMRNLAIGSEKDKENVNSQVDLSTPVAEVRRSSRNIRPPQRYSPILNYLLLTDGGELECYDEALQDENSSKWELAMKDEMDSLLGNQTWELTE---LPVGKKALHNKWVYKIKNEHDGS-KRYKARLVVKGFQQKESIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQEN-LVCKLRKSLYGLKQAPRQWYKKFDNFM 703          
BLAST of mRNA_H-paniculata_contig5795.13386.1 vs. uniprot
Match: A0A2N9F5X3_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F5X3_FAGSY)

HSP 1 Score: 189 bits (480), Expect = 1.700e-50
Identity = 120/331 (36.25%), Postives = 189/331 (57.10%), Query Frame = 1
Query:    1 IKRLRSDQRGEYTGKPFRQFCAENGIKQEFSPAYTPQQNGVAERSWRNVFEMARANMITANMGRRYWAEAMRSAVYCLNRAPTRPRNGGMPYEKWHGETPKLDHVRV---LDCTTYVMFHVRDWSPIRIRARAKENREEDPGATARVAKVENTG-NLAGAVSKGKPNSAAEALNGPAAEKWRAAMEEEWGALVGNGTWESEDPGRLPAGRKAIGTKWIFNRKLMEDGSVARYKPRLVAQGFSQVEGEDFFEAGAPVARMSTLRTVFSPAAKHDFELEGMDVDAAYLNTPEEEDLFDKPPPEFSLFYRDIPFVRRQRESLYGLKQSGRNWDK 981
            IK LRSD+ GEY   PF +FC+++GI  + +  Y+PQQNGVAER  R + EM  A +I++ + +  W EA+ SA Y LN+ P +  +   PYE W G TP    ++V   L+ T+         S    +   +E  E +P  + R    +  G +    + + +P S  EA++ P A  W+ A+  E  +++ N TWE  D   LP G K +G KWIF RK+  DGS+ +YK RLV +G+ Q EG D+F+  +PV R++++R + + AA ++ E+  MDV  A+LN   +E+++ + P  F +  ++   V R  +SLYGLKQ+ + W +
Sbjct:  151 IKVLRSDRGGEYES-PFGEFCSQHGIVHQTTAPYSPQQNGVAERKNRTLKEMMNAMLISSGLPQNLWGEAILSANYILNKLPQKKLDK-TPYELWKGRTPSYQFLKVWGNLESTS---------STSHDQELMEERNEVEPRRSKRTKTSKTFGPDFLTFMLEDEPQSFKEAMSMPEAPLWKEAVNSEIESILQNHTWELVD---LPPGCKPLGYKWIFKRKMKADGSIDKYKARLVVKGYKQKEGVDYFDTYSPVTRITSIRMLIAIAALYNLEIHQMDVKTAFLNGELDEEIYMEQPEGFIVPGKEKK-VCRLVKSLYGLKQAPKQWHE 466          
BLAST of mRNA_H-paniculata_contig5795.13386.1 vs. uniprot
Match: A0A5H2XLD9_PRUDU (Transposable element protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2XLD9_PRUDU)

HSP 1 Score: 181 bits (460), Expect = 2.180e-50
Identity = 125/359 (34.82%), Postives = 188/359 (52.37%), Query Frame = 1
Query:    1 IKRLRSDQRGEYTGKPFRQFCAENGIKQEFSPAYTPQQNGVAERSWRNVFEMARANMITANMGRRYWAEAMRSAVYCLNRAPTRPRNGGMPYEKWHGETPKLDHVRVLDC------------------------------TTYVMFHVRDW--SPI-RIRARAKENREEDPGATAR---VAKVENTGNLAGAVSKGKPNSAAEALNGPAAEKWRAAMEEEWGALVGNGTWESEDPGRLPAGRKAIGTKWIFNRKLMEDGSVARYKPRLVAQGFSQVEGEDFFEAGAPVARMSTLRTVFSPAAKHDFELEGMDVDAAYLNTPEEEDLFDKPPPEFSLFYRDIPFVRRQRESLYGLKQSGR 969
            +K LR+D+ GE+T   F ++C  NGIK+E +  YTPQQNGVAER  R + EMAR+ +   ++   +WAE + +AV+ LNR+PT+      P+E WH   PK+D  ++                                 T ++ F    +  SPI   R     + +  P   AR   +A +  + +LA  +S  +P    EA+       W+ AM+EE   +  N TWE  D    P  +  IG KW++  K  EDGS+ ++K RLVA+G+SQ  G DF E  APV RM T+RTV + AA+   ++  +DV +A+LN   EE+++ + P  +    R+   V R R++LYGLKQ+ R
Sbjct:   14 LKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRTIVEMARSMLKAKSLPNTFWAEEIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGALHMHISLLKREKNLMRKSKAYRLIDPRTKRTRFITFRRTQFLQSPIPSARTADPSSPDSTPRLNARTRSLADIYESCDLA--LSALEPQKFEEAVK---ENIWQDAMDEEIRVIKKNRTWELVD---RPKSKDIIGLKWVYKTKFNEDGSIQKHKARLVAKGYSQQPGIDFNETFAPVVRMETIRTVLALAAQLKTKVYQLDVKSAFLNGELEEEVYVEQPQGYVEKGREDK-VYRLRKALYGLKQAPR 363          
BLAST of mRNA_H-paniculata_contig5795.13386.1 vs. uniprot
Match: A0A1W7R6H7_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6H7_AEDAL)

HSP 1 Score: 190 bits (482), Expect = 2.720e-50
Identity = 142/424 (33.49%), Postives = 193/424 (45.52%), Query Frame = 1
Query:   10 LRSDQRGEYTGKPFRQFCAENGIKQEFSPAYTPQQNGVAERSWRNVFEMARANMITANMGRRYWAEAMRSAVYCLNRAPTRPRNGGMPYEKWHGETPKLDHVRVLDCTTYVMFHVRDWSPIRIRA--------------------------------------------------------RAKENREEDP----------------GATARVAKVE------NTGNLAGAVSKG----------------KPNSAAEALNGPAAEKWRAAMEEEWGALVGNGTWESEDPGRLPAGRKAIGTKWIFNRKLMEDGSVARYKPRLVAQGFSQVEGEDFFEAGAPVARMSTLRTVFSPAAKHDFELEGMDVDAAYLNTPEEEDLFDKPPPEFSLFYRDIPFVRRQRESLYGLKQSGRNWDKLLTIFL 999
            +RSD  GEY  K   +F    GI  +++ AY+PQQNG+AER  R + EMAR  +I ANM  R+WAEA+ +A Y  N  PTR      PYE W G  P L HV++     +V    + W+ +  +A                                                          KEN   +P                G T+  A+ E      NT   +   +KG                +P S  EA+ GP  E W++A++EE  +   N TW+      LP GRK +G KWIF RKL E G+VARYK RLVAQGF+Q  G D+ E  APV +M T RT+ S A K +  ++  DV  AYLN   EE ++ + P    +  +++  V + R+ LYGLKQS R W+K L   L
Sbjct:  537 IRSDSGGEYKSKHLGRFYRNKGITPQYTAAYSPQQNGIAERKNRTLVEMARCMLIEANMDVRFWAEAINTAAYIQNLLPTRSIKS-TPYEAWFGRKPDLKHVQMFGSQAFVHVPDQKWAKLDSKAVKLTFVGYADSQKAYRFVDQSTNKLTCSRDARFINEGKDLQIQAVERPGNIEIDLSTPKENGSNNPVPTFDDDEDSFVDASEGETSSSAESEDDVVEINTLRRSNRSTKGVAPSRFKVGMAKNQLPEPRSFKEAVEGPECELWKSAIKEELMSHQENKTWDLVP---LPPGRKTVGCKWIFKRKLDEHGNVARYKARLVAQGFTQKFGTDYDEVYAPVVKMVTFRTLLSVATKRNMLIKHADVKTAYLNGELEELVYMRQPAGCEIGDKNL--VCKLRKGLYGLKQSARIWNKTLDKVL 954          
BLAST of mRNA_H-paniculata_contig5795.13386.1 vs. uniprot
Match: A0A6A2YZF9_HIBSY (Mannosylglycoprotein endo-beta-mannosidase n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YZF9_HIBSY)

HSP 1 Score: 189 bits (480), Expect = 5.250e-50
Identity = 128/356 (35.96%), Postives = 190/356 (53.37%), Query Frame = 1
Query:    1 IKRLRSDQRGEYTGKPFRQFCAENGIKQEFSPAYTPQQNGVAERSWRNVFEMARANMITANMGRRYWAEAMRSAVYCLNRAPTRPRNGGMPYEKWHGETPKLDHVRVLDCTTYVMFHVRDWSPIRIRARAKEN------------REEDPGA-----TARVAKVENTGNLAGAV------SKGKPNSAAEALNGPAAEKWRAAMEEEWGALVGNGTWESEDPGRLPAGRKAIGTKWIFNRKLMEDGSVARYKPRLVAQGFSQVEGEDFFEAGAPVARMSTLRTVFSPAAKHDFELEGMDVDAAYLNTPEEEDLFDKPPPEFSLFYRDIPFVRRQRESLYGLKQSGRNWDKLLTIFL 999
            +KRLRSD  GEY    FR FCA NGIK E +   TPQQNGVAER  R + E AR+  I A + +  WAEA+ +A Y +NR P+ P +GG+  E W  +   L H+RV  C +YV  +  + +  +  A  +E             +EE+P       ++R+ K   T   + ++        G+P    EA+    + K  ++M++E  +L+ N TWE  +   LP+G++A+  KWI+  K   D S  RYK RLV +GF Q EG D+ E  +PV ++ST+R V    A  +  LE +DV  A+L+   EE+++ + P  F +       V R + +LYGLKQ+ R W K    F+
Sbjct:   64 VKRLRSDNGGEYRDSRFRDFCANNGIKMETTVPITPQQNGVAERMNRTLNERARSMRIHAGLPKFLWAEAINTAAYLINRGPSVPLDGGILEEAWSKKEINLSHLRVFGCISYVHINSAERTETKEFAEFEEISGNDVQISPEAVQEEEPRTPELRRSSRIPKP--TQRYSPSLHYLLLTDNGEPECYDEAMQVDDSVKCESSMKDEMDSLMSNQTWELAE---LPSGKRALHNKWIYRFKEENDES-KRYKARLVVKGFQQKEGIDYNEIFSPVVKLSTIRLVLKIVAAENLHLEQLDVKTAFLHGDLEEEIYMRQPEGF-IEADKKNMVCRLKNNLYGLKQAPRQWYKKFDSFM 412          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5795.13386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A225ULV3_9STRA3.990e-5635.61Retrotransposon protein, Ty1-Copia subclass (Fragm... [more]
A0A2H9ZYF2_9ASPA3.130e-5236.99Retrovirus-related Pol polyprotein from transposon... [more]
A0A438HFL3_VITVI1.060e-5136.29Retrovirus-related Pol polyprotein from transposon... [more]
A0A438K0F0_VITVI4.070e-5135.91Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y9ZRJ7_9AGAM6.920e-5137.64Integrase catalytic domain-containing protein n=1 ... [more]
A0A438CLT8_VITVI1.360e-5034.97Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9F5X3_FAGSY1.700e-5036.25Integrase catalytic domain-containing protein n=2 ... [more]
A0A5H2XLD9_PRUDU2.180e-5034.82Transposable element protein (Fragment) n=1 Tax=Pr... [more]
A0A1W7R6H7_AEDAL2.720e-5033.49Putative pol polyprotein (Fragment) n=1 Tax=Aedes ... [more]
A0A6A2YZF9_HIBSY5.250e-5035.96Mannosylglycoprotein endo-beta-mannosidase n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5795contigH-paniculata_contig5795:1916..3429 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score182.6
Seed ortholog evalue3.1e-43
Seed eggNOG ortholog67593.Physo139458
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GAG-pre-integrase domain
EggNOG OGs3QH4V@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1008
Cds size1008
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930628.6448023-CDS-H-paniculata_contig5795:1915..25731622930628.6448023-CDS-H-paniculata_contig5795:1915..2573Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5795 1916..2573 -
1691481379.7945912-CDS-H-paniculata_contig5795:1915..25731691481379.7945912-CDS-H-paniculata_contig5795:1915..2573Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5795 1916..2573 -
1622930628.6566763-CDS-H-paniculata_contig5795:3079..34291622930628.6566763-CDS-H-paniculata_contig5795:3079..3429Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5795 3080..3429 -
1691481379.8061748-CDS-H-paniculata_contig5795:3079..34291691481379.8061748-CDS-H-paniculata_contig5795:3079..3429Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5795 3080..3429 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5795.13386.1prot_H-paniculata_contig5795.13386.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5795 1916..3429 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5795.13386.1

>prot_H-paniculata_contig5795.13386.1 ID=prot_H-paniculata_contig5795.13386.1|Name=mRNA_H-paniculata_contig5795.13386.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=336bp
IKRLRSDQRGEYTGKPFRQFCAENGIKQEFSPAYTPQQNGVAERSWRNVF
EMARANMITANMGRRYWAEAMRSAVYCLNRAPTRPRNGGMPYEKWHGETP
KLDHVRVLDCTTYVMFHVRDWSPIRIRARAKENREEDPGATARVAKVENT
GNLAGAVSKGKPNSAAEALNGPAAEKWRAAMEEEWGALVGNGTWESEDPG
RLPAGRKAIGTKWIFNRKLMEDGSVARYKPRLVAQGFSQVEGEDFFEAGA
PVARMSTLRTVFSPAAKHDFELEGMDVDAAYLNTPEEEDLFDKPPPEFSL
FYRDIPFVRRQRESLYGLKQSGRNWDKLLTIFLLG*
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mRNA from alignment at H-paniculata_contig5795:1916..3429-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5795.13386.1 ID=mRNA_H-paniculata_contig5795.13386.1|Name=mRNA_H-paniculata_contig5795.13386.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1514bp|location=Sequence derived from alignment at H-paniculata_contig5795:1916..3429- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTAAGCGCCTTCGGTCGGATCAGCGAGGAGAATATACTGGGAAACCTTT TAGGCAATTCTGCGCGGAAAATGGCATCAAGCAGGAGTTCTCTCCCGCCT ACACACCGCAACAAAACGGTGTGGCGGAGCGCAGCTGGCGTAACGTTTTC GAGATGGCAAGAGCCAACATGATCACCGCCAACATGGGTCGTCGATATTG GGCGGAAGCGATGCGCTCGGCTGTGTATTGCCTAAATCGCGCCCCGACGC GACCGCGCAACGGAGGAATGCCGTACGAGAAATGGCATGGCGAGACGCCA AAGTTGGACCACGTTCGTGTCCTCGACTGCACGACGTACGTGATGTTCCA GTCGCAGCAGAGACGCAAGCTCGGCGCCAAAGCATGGGCGGGGTGTTTCT GGGGTACGACGAGAACAGCCCGAGTTATCGCACATATAACCCGGAAAACA AGAGCGTCCAGTTGAGCAGAAGCGTGAGATTTGACGAAAAGGACTTCGTA ACGGACCATCGCGGACAGCTGGAGCACGACGGGACGCAAAACATGGAAGA TTTGTTTCAACACAGCCAGTCACGCCAGCGCTCACGCGATCCCGCGCCCG AAGTGGGCAAGCAAGCGTAACTAACTCGGAAGACCGGACGTCGGCGGCAC AAATACCGCCGATATTGCCGACATATTTGCTGCCAGCCACCAGCGTAAAC GCAGTCAGTGTCTTGAGCGATAACGATTATCACGAAAGTAACGGCGACTC CAAGATGAAGAATGCGGAGCCCGCAGTCGAACACGCACCATCAGCAGAGA CAGCCGCACCCGCGTCGTGGGGGAACACCACGAAGCAGTCGGGGACGGAG GTGCAGCGTCCGCGATTGGTCCCCAATACGAATACGGGCGAGAGCAAAGG AAAACCGCGAAGAAGATCCAGGCGCTACCGCGCGCGTGGCAAAAGTGGAA AACACTGGCAACCTTGCAGGGGCGGTATCTAAGGGGAAGCCGAACTCCGC GGCAGAAGCATTAAACGGTCCAGCGGCGGAAAAATGGCGCGCGGCAATGG AGGAGGAATGGGGGGCGTTGGTGGGAAATGGAACATGGGAAAGCGAAGAC CCGGGGCGATTACCGGCAGGGCGGAAGGCGATTGGTACGAAATGGATTTT CAATCGGAAACTGATGGAGGACGGCAGCGTGGCACGCTACAAACCGCGAC TGGTGGCTCAAGGCTTTTCACAGGTGGAGGGGGAAGATTTCTTTGAAGCC GGTGCCCCCGTAGCTCGCATGTCGACGTTACGTACTGTTTTTAGCCCAGC CGCCAAACATGATTTCGAATTAGAAGGCATGGACGTAGATGCGGCGTACT TGAACACCCCAGAAGAAGAAGATTTGTTTGATAAGCCACCCCCCGAGTTT TCCCTTTTCTACCGAGACATACCGTTTGTGCGCCGCCAGCGTGAAAGCCT GTACGGCCTCAAGCAGAGCGGCCGAAACTGGGATAAGCTCTTGACGATTT TCTTGTTGGGATAG
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Coding sequence (CDS) from alignment at H-paniculata_contig5795:1916..3429-

>mRNA_H-paniculata_contig5795.13386.1 ID=mRNA_H-paniculata_contig5795.13386.1|Name=mRNA_H-paniculata_contig5795.13386.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2016bp|location=Sequence derived from alignment at H-paniculata_contig5795:1916..3429- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTAAGCGCCTTCGGTCGGATCAGCGAGGAGAATATACTGGGAAACCTTT
TAGGCAATTCTGCGCGGAAAATGGCATCAAGCAGGAGTTCTCTCCCGCCT
ACACACCGCAACAAAACGGTGTGGCGGAGCGCAGCTGGCGTAACGTTTTC
GAGATGGCAAGAGCCAACATGATCACCGCCAACATGGGTCGTCGATATTG
GGCGGAAGCGATGCGCTCGGCTGTGTATTGCCTAAATCGCGCCCCGACGC
GACCGCGCAACGGAGGAATGCCGTACGAGAAATGGCATGGCGAGACGCCA
AAGTTGGACCACGTTCGTGTCCTCGACTGCACGACGTACGTGATGTTCCA
ATTAAGCGCCTTCGGTCGGATCAGCGAGGAGAATATACTGGGAAACCTTT
TAGGCAATTCTGCGCGGAAAATGGCATCAAGCAGGAGTTCTCTCCCGCCT
ACACACCGCAACAAAACGGTGTGGCGGAGCGCAGCTGGCGTAACGTTTTC
GAGATGGCAAGAGCCAACATGATCACCGCCAACATGGGTCGTCGATATTG
GGCGGAAGCGATGCGCTCGGCTGTGTATTGCCTAAATCGCGCCCCGACGC
GACCGCGCAACGGAGGAATGCCGTACGAGAAATGGCATGGCGAGACGCCA
AAGTTGGACCACGTTCGTGTCCTCGACTGCACGACGTACGTGATGTTCCA
CGTCCGCGATTGGTCCCCAATACGAATACGGGCGAGAGCAAAGGAAAACC
GCGAAGAAGATCCAGGCGCTACCGCGCGCGTGGCAAAAGTGGAAAACACT
GGCAACCTTGCAGGGGCGGTATCTAAGGGGAAGCCGAACTCCGCGGCAGA
AGCATTAAACGGTCCAGCGGCGGAAAAATGGCGCGCGGCAATGGAGGAGG
AATGGGGGGCGTTGGTGGGAAATGGAACATGGGAAAGCGAAGACCCGGGG
CGATTACCGGCAGGGCGGAAGGCGATTGGTACGAAATGGATTTTCAATCG
GAAACTGATGGAGGACGGCAGCGTGGCACGCTACAAACCGCGACTGGTGG
CTCAAGGCTTTTCACAGGTGGAGGGGGAAGATTTCTTTGAAGCCGGTGCC
CCCGTAGCTCGCATGTCGACGTTACGTACTGTTTTTAGCCCAGCCGCCAA
ACATGATTTCGAATTAGAAGGCATGGACGTAGATGCGGCGTACTTGAACA
CCCCAGAAGAAGAAGATTTGTTTGATAAGCCACCCCCCGAGTTTTCCCTT
TTCTACCGAGACATACCGTTTGTGCGCCGCCAGCGTGAAAGCCTGTACGG
CCTCAAGCAGAGCGGCCGAAACTGGGATAAGCTCTTGACGATTTTCTTGT
TGGGATAGCGTCCGCGATTGGTCCCCAATACGAATACGGGCGAGAGCAAA
GGAAAACCGCGAAGAAGATCCAGGCGCTACCGCGCGCGTGGCAAAAGTGG
AAAACACTGGCAACCTTGCAGGGGCGGTATCTAAGGGGAAGCCGAACTCC
GCGGCAGAAGCATTAAACGGTCCAGCGGCGGAAAAATGGCGCGCGGCAAT
GGAGGAGGAATGGGGGGCGTTGGTGGGAAATGGAACATGGGAAAGCGAAG
ACCCGGGGCGATTACCGGCAGGGCGGAAGGCGATTGGTACGAAATGGATT
TTCAATCGGAAACTGATGGAGGACGGCAGCGTGGCACGCTACAAACCGCG
ACTGGTGGCTCAAGGCTTTTCACAGGTGGAGGGGGAAGATTTCTTTGAAG
CCGGTGCCCCCGTAGCTCGCATGTCGACGTTACGTACTGTTTTTAGCCCA
GCCGCCAAACATGATTTCGAATTAGAAGGCATGGACGTAGATGCGGCGTA
CTTGAACACCCCAGAAGAAGAAGATTTGTTTGATAAGCCACCCCCCGAGT
TTTCCCTTTTCTACCGAGACATACCGTTTGTGCGCCGCCAGCGTGAAAGC
CTGTACGGCCTCAAGCAGAGCGGCCGAAACTGGGATAAGCTCTTGACGAT
TTTCTTGTTGGGATAG
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