prot_H-paniculata_contig5791.13383.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5791.13383.1
Unique Nameprot_H-paniculata_contig5791.13383.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length194
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5791.13383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 148..193
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 128..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 123..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..122
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 76..93
NoneNo IPR availableTMHMMTMhelixcoord: 52..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5791contigH-paniculata_contig5791:7412..11307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5791.13383.1mRNA_H-paniculata_contig5791.13383.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5791 1595..12253 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5791.13383.1 ID=prot_H-paniculata_contig5791.13383.1|Name=mRNA_H-paniculata_contig5791.13383.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=194bp
MKVDAPHVVSSGVPQATVVVAPQPQATPAKTAAGCDCTIPPDAPQEVKQV
RILAIVVIAVHVLALLVLGFWNWSQWVGSLCGIIAAAVMLCCYQKTCYTC
TPATWIVALIFDLIGAILWFSVPGYEWVGIFSIIALIATIPAVVFGFKAC
SGWVHPIDSTRGPVVAVHESRPAPTATVSHMPQRAPPAYGSSV*
back to top