mRNA_H-paniculata_contig5790.13382.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5790.13382.1
Unique NamemRNA_H-paniculata_contig5790.13382.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5790.13382.1 vs. uniprot
Match: D8LS49_ECTSI (Similarity to sodium/hydrogen exchanger and potassium exchanger n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS49_ECTSI)

HSP 1 Score: 509 bits (1311), Expect = 2.170e-168
Identity = 265/294 (90.14%), Postives = 278/294 (94.56%), Query Frame = 1
Query:    1 VSGLLAMKAAVIAVISLMFGLSVANAQQTGLLLSQGGEFAFVAFGMAAGLGIIEPQLCKLLLTTVAISMAATPALSTFSAWVADQMEGRMGYDHYVGGDSESDEIRQGGEFVVVCGYGRIGRLVCELLGKKFINFVAFDNNPLKAMEARNRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDIKGTNKAVVNLRREFPDLPIFARAKDAKHQKRLASIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGYSTEEVNVLLEDTRKKFVLEKGLENEEDDNLFEQLGISRSQVQSY 882
            VSGLLAMKAA+IA+I+L FGLSVANAQQTGLLLSQGGEFAFVAFGMA  LGIIEPQLCKLLLTTVAISMAATPALS FSAWVADQME RMGYDHY+GGDSESDEIRQG  FVVVCGYGRIGRLVCELLGKKFINFVAFDNNPLKAMEARNRGLPVFYGDV RPEVLNAFNVGKAKAVICTLS++KGT  AVVNLRREFPDLPIFARA+DA+HQK LASI DVVAMVPTLPEDSIIVSLPFGGAVLRSLG + +EVNVLLEDTRKKFVLEKGLENEEDDNLFEQLGI +S V++Y
Sbjct:  601 VSGLLAMKAAIIALIALAFGLSVANAQQTGLLLSQGGEFAFVAFGMAERLGIIEPQLCKLLLTTVAISMAATPALSNFSAWVADQMEARMGYDHYLGGDSESDEIRQGDGFVVVCGYGRIGRLVCELLGKKFINFVAFDNNPLKAMEARNRGLPVFYGDVMRPEVLNAFNVGKAKAVICTLSEVKGTTTAVVNLRREFPDLPIFARAQDARHQKNLASITDVVAMVPTLPEDSIIVSLPFGGAVLRSLGCTADEVNVLLEDTRKKFVLEKGLENEEDDNLFEQLGIQKSMVETY 894          
BLAST of mRNA_H-paniculata_contig5790.13382.1 vs. uniprot
Match: A0A835Z5B4_9STRA (Sodium/hydrogen exchanger family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B4_9STRA)

HSP 1 Score: 392 bits (1007), Expect = 5.060e-128
Identity = 209/298 (70.13%), Postives = 247/298 (82.89%), Query Frame = 1
Query:    1 VSGLLAMKAAVIAVISLMFGLSVANAQQTGLLLSQGGEFAFVAFGMAAGLGIIEPQLCKLLLTTVAISMAATPALSTFSAWVADQMEGRMGYDHYVGGDSESDEIRQGGEFVVVCGYGRIGRLVCELLGKKFINFVAFDNNPLKAMEARNRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDIKGTNKAVVNLRREFPDLPIFARAKDAKHQKRLASIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGYSTEEVNVLLEDTRKKFVLEKGLENEEDDNLFEQLGISRSQVQSYKTDG 894
            V GLLA+KAA+  ++ L  GLS+ANAQQTGLLLSQGGEFAFVAFGMA  LGI+ P L KLLLTTVAISMAATPALS+ SA +A ++EG+MG+ HYVG DSES EI++   FVVVCGYGRIGRLVC+LL KKFI +VAF+ +P KAMEAR RGLPVFYGDV RPEVL +FNVGKA+A+I T+SDI+  NKAVVN+RREFPDLP+FARAKDA+HQKRL   ++V AMVP LPEDSI+VSLPFGGA LRSLG S EEVNVL+EDTRKK+++ +GLE EE +N+  QL +   Q+ S  T G
Sbjct:  286 VVGLLALKAAITTLVCLTMGLSLANAQQTGLLLSQGGEFAFVAFGMAERLGILSPGLTKLLLTTVAISMAATPALSSMSARLAARIEGKMGFSHYVGIDSESAEIKEREGFVVVCGYGRIGRLVCDLLDKKFIPYVAFEADPQKAMEARQRGLPVFYGDVTRPEVLRSFNVGKAQALISTISDIRTANKAVVNIRREFPDLPVFARAKDAQHQKRLQGTLNVTAMVPVLPEDSIMVSLPFGGAFLRSLGLSQEEVNVLVEDTRKKYLISRGLEEEETENIMSQLSL---QISSRATVG 580          
BLAST of mRNA_H-paniculata_contig5790.13382.1 vs. uniprot
Match: A0A4D9DB16_9STRA (RCK N-terminal domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DB16_9STRA)

HSP 1 Score: 318 bits (815), Expect = 1.190e-98
Identity = 162/264 (61.36%), Postives = 205/264 (77.65%), Query Frame = 1
Query:    7 GLLAMKAAVIAVISLMFGLSVANAQQTGLLLSQGGEFAFVAFGMAAGLGIIEPQLCKLLLTTVAISMAATPALSTFSAWVADQMEGRMGYDHYVGGDSESDEIRQG-GEFVVVCGYGRIGRLVCELLGKKFINFVAFDNNPLKAMEARNRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDIKGTNKAVVNLRREFPDLPIFARAKDAKHQKRLASIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGYSTEEVNVLLEDTRKK 795
            GLL +K A++  I L FGLS++NAQ  GLLLSQGGEFAFVAFGMA  LGI+ P   KLLLTTVA+SMA TP L     + ++++E + G+ HY+G D+E   I+    +FVVVCGYGRIG++VC+LL KKFI +VAFD NP K +EARNRGLPVF+GDV RPEVL +FNV KA+AVI T ++++ TNKAVV LR+ +P +PIFARA D  HQKRL + ++V AMVP LPEDS+++SLPFGG VLR +G S EEV+VL++D RKK
Sbjct:  344 GLLVLKTAILTTICLAFGLSLSNAQHVGLLLSQGGEFAFVAFGMAKSLGILAPPAAKLLLTTVALSMAVTPVLDEMGNFFSERIENKYGFSHYLGADAEGQAIKATQNDFVVVCGYGRIGKMVCDLLDKKFIPYVAFDVNPAKVIEARNRGLPVFFGDVSRPEVLRSFNVDKARAVIITTNEMRATNKAVVTLRKLYPKMPIFARAADLAHQKRLQNTLEVSAMVPILPEDSVLLSLPFGGRVLRKMGVSPEEVDVLMDDMRKK 607          
BLAST of mRNA_H-paniculata_contig5790.13382.1 vs. uniprot
Match: A0A7S1ZA81_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZA81_TRICV)

HSP 1 Score: 312 bits (800), Expect = 6.610e-98
Identity = 158/286 (55.24%), Postives = 216/286 (75.52%), Query Frame = 1
Query:    1 VSGLLAMKAAVIAVISLMFGLSVANAQQTGLLLSQGGEFAFVAFGMAAGLGIIEPQLCKLLLTTVAISMAATPALSTFSAWVADQMEGRMGYDHYVGGDSESDEIRQGGEFVVVCGYGRIGRLVCELLGKKFINFVAFDNNPLKAMEARNRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDIKGTNKAVVNLRREFPDLPIFARAKDAKHQKRLASIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGYSTEEVNVLLEDTRKKFVLEKGLENEEDDNLFEQLGI 858
            V G++A+KA V  ++S+ FGLS++ +QQTGLLLSQ GEFAFVAFG+A  LGI++PQ  K LLT VA++MAATPAL++    +A ++E    + HY+G D E+ E+++  +FV V GYG +G++VC+LL +KF+ +V  + NP KA+EARN+GLPVFYGDV RPEV  AFN+GKAKA+I T+SD    N+AV++LRR +PD  IFARAKDA H +RL   +DVVAMVP +PED+++++LPFGGAVLR LG   EEV+ +LE  RK+ +  KGL   E++ +  QLGI
Sbjct:  126 VFGIVALKAVVAGLLSMAFGLSLSTSQQTGLLLSQSGEFAFVAFGLARSLGILDPQTTKFLLTCVALTMAATPALASIGVKIAKKLEEGSDFSHYLGQDKEAMELKESDDFVAVVGYGNVGKVVCDLLDRKFVKYVGLEVNPNKAIEARNKGLPVFYGDVGRPEVAEAFNIGKAKAIISTISDKAEANRAVISLRRMYPDTKIFARAKDADHAERLQRTLDVVAMVPIVPEDNMLLTLPFGGAVLRGLGAPAEEVSAILEAKRKEVLQTKGLNESEEEAVMLQLGI 411          
BLAST of mRNA_H-paniculata_contig5790.13382.1 vs. uniprot
Match: A0A7S4VD07_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VD07_9STRA)

HSP 1 Score: 304 bits (779), Expect = 1.570e-96
Identity = 157/286 (54.90%), Postives = 210/286 (73.43%), Query Frame = 1
Query:    1 VSGLLAMKAAVIAVISLMFGLSVANAQQTGLLLSQGGEFAFVAFGMAAGLGIIEPQLCKLLLTTVAISMAATPALSTFSAWVADQMEGRMGYDHYVGGDSESDEIRQGGEFVVVCGYGRIGRLVCELLGKKFINFVAFDNNPLKAMEARNRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDIKGTNKAVVNLRREFPDLPIFARAKDAKHQKRLASIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGYSTEEVNVLLEDTRKKFVLEKGLENEEDDNLFEQLGI 858
            VSG++ +KA + A +  MFGLS++ AQQTGL+LSQGGEFAFVAFG+A  LGI +PQ  KLLLT V+++MA TP L+     +A ++E +  + HY+G D ++ +I+   +F VV GYG +G+++C+LL +KFI +V  + +P KA++ARN+GLPVFYGDV R EV  AFNVGKAKAVICT+SD    N+AV+ LRR +PD+ IFARAKDA H +RL   +DV AMVP LPED+ +++LPFGGAVLRSLG   EEVN +LE  RK  +  +GL   E + +  QLGI
Sbjct:   37 VSGIVIIKAVIAASLGRMFGLSLSTAQQTGLILSQGGEFAFVAFGLARNLGIFDPQTTKLLLTCVSLTMALTPFLADAGQKIATKLEEKSDFTHYLGQDQDAVDIKDSEDFAVVIGYGAVGKVICDLLDRKFIKYVGLEVDPNKAIQARNKGLPVFYGDVARSEVAEAFNVGKAKAVICTISDKAEANRAVIALRRLYPDVKIFARAKDADHAERLQRTLDVAAMVPILPEDNALMTLPFGGAVLRSLGAPAEEVNAILEQKRKDVLSGRGLAESEQETVLLQLGI 322          
BLAST of mRNA_H-paniculata_contig5790.13382.1 vs. uniprot
Match: A0A7S2I2V9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2V9_9STRA)

HSP 1 Score: 300 bits (768), Expect = 1.080e-93
Identity = 153/286 (53.50%), Postives = 208/286 (72.73%), Query Frame = 1
Query:    1 VSGLLAMKAAVIAVISLMFGLSVANAQQTGLLLSQGGEFAFVAFGMAAGLGIIEPQLCKLLLTTVAISMAATPALSTFSAWVADQMEGRMGYDHYVGGDSESDEIRQGGEFVVVCGYGRIGRLVCELLGKKFINFVAFDNNPLKAMEARNRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDIKGTNKAVVNLRREFPDLPIFARAKDAKHQKRLASIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGYSTEEVNVLLEDTRKKFVLEKGLENEEDDNLFEQLGI 858
            V G++ +KA +  ++   FGLS++ AQQTGL+LSQGGEFAFVAFG+A  LGI +P   KLLLT V+++MA TP L+     VA ++E +  + HY+G D ++ +I+   +F VV GYG +GR++C+LL +KFI +V  + +P KA++ARN+GLPVFYGD+ RPEV  AFNVGKA+AVICT+SD    N+A++ LRR +PD+ IFARAKDA H  RL   +D+ AMVP LPED+ +++LPFGGAVLRSLG  TEEVN +LE  RK  +  +GL   E + +  QLGI
Sbjct:  116 VLGIVLLKALIAGLLGRAFGLSLSTAQQTGLILSQGGEFAFVAFGLARNLGIFDPPTTKLLLTCVSLTMAITPFLADVGGRVATKLEEKSDFTHYLGQDQDAVDIKDSEDFAVVVGYGNVGRVICDLLDRKFIKYVGLEVDPNKAIQARNKGLPVFYGDIGRPEVAEAFNVGKAQAVICTISDKAEANRALIALRRLYPDVKIFARAKDADHADRLQRTLDIAAMVPILPEDNALMTLPFGGAVLRSLGAPTEEVNAILEQKRKDVLSGRGLAESEQETVLLQLGI 401          
BLAST of mRNA_H-paniculata_contig5790.13382.1 vs. uniprot
Match: A0A7S1FUH2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUH2_9STRA)

HSP 1 Score: 291 bits (744), Expect = 2.730e-91
Identity = 156/301 (51.83%), Postives = 210/301 (69.77%), Query Frame = 1
Query:    1 VSGLLAMKAAVIAVISLMFGLSVANAQQTGLLLSQGGEFAFVAFGMAAGLGIIEPQLCKLLLTTVAISMAATPALSTFSAWVADQMEGRMGYDHYVGGDSESDEIRQGGEFVVVCGYGRIGRLVCELLGKKFINFVAFDNNPLKAMEARNRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDIKGTNKAVVNLRREFPDLPIFARAKDAKHQKRLASIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGYSTEEVNVLLEDTRKKFVLEKGLENEEDDNL---FEQLGISRSQVQSYKTDG 894
            +  +L +KA V   +  +FGLS ANAQQ G+ L QGGEFAFV FGMA GLGI+ P   K+LLT+VA++MA TPAL   S   A +ME   G+ HY+G D +++EI++  +FVVV GYG +G+L+CELL  K I ++  + NP KA+EARNRGLPVFYGD+ RPEV  AF+VGKAK  + T+S+   TN+AV+ LRR +P+L IFARAK+ +H++RL   +DVVAMVP LPEDS++++LPFGGAVL SLG   EEV  +LE  RK+ +  +  E   DD L   F  +G + + V +   +G
Sbjct:   76 IMAILLIKAVVATAVCAVFGLSFANAQQAGVYLCQGGEFAFVTFGMARGLGILTPLQTKILLTSVAMTMAVTPALVEASHHFAKRMEENSGFTHYMGEDRDANEIKESEDFVVVIGYGTVGKLICELLDSKLIKYIGIEVNPNKAIEARNRGLPVFYGDITRPEVAEAFSVGKAKGCVVTISEKLDTNRAVITLRRLYPNLKIFARAKNDQHRERLMKTLDVVAMVPVLPEDSLLLTLPFGGAVLSSLGAPVEEVKAILETKRKEIIELRNPEFGRDDLLMLGFNTVGDASADVSAADMEG 376          
BLAST of mRNA_H-paniculata_contig5790.13382.1 vs. uniprot
Match: A0A7S2XSK7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSK7_9STRA)

HSP 1 Score: 302 bits (774), Expect = 4.260e-90
Identity = 155/295 (52.54%), Postives = 216/295 (73.22%), Query Frame = 1
Query:    1 VSGLLAMKAAVIAVISLMFGLSVANAQQTGLLLSQGGEFAFVAFGMAAGLGIIEPQLCKLLLTTVAISMAATPALSTFSAWVADQMEGRMGYDHYVGGDSESDEIRQGGEFVVVCGYGRIGRLVCELLGKKFINFVAFDNNPLKAMEARNRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDIKGTNKAVVNLRREFPDLPIFARAKDAKHQKRLASIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGYSTEEVNVLLEDTRKKFVLEKGLENEEDDNLFEQLGISRSQVQSYK 885
            V G +A+KA +  ++ L  GLS++ +QQTGL+LSQGGEFAFVAFG+A GLGI+EP   KL+LT+V+++MA TP L      +A ++E +  + HY+G DSE+ EI +  EF VV GYG +G++VC+LL +KF  +V  + +P KA+EARN+GLPVF+GD+ RPEV  AFNVG AKAVI T++D    N+AV++LRRE+P+L IFARAKDA H  RL + +DVVAMVP +PED+++++LPFGGAVL+SLG    EVN +LE  RK+ +  +GL   E++ +  QLGI   + +  K
Sbjct:  598 VFGTVAIKAIITTLLCLASGLSLSTSQQTGLILSQGGEFAFVAFGLARGLGILEPAFTKLMLTSVSLTMAITPFLYDAGVKIAKRLEEKSDFTHYLGQDSEAKEIAESDEFAVVVGYGAVGKVVCDLLDRKFYKYVGIEVDPNKAIEARNKGLPVFFGDIGRPEVAEAFNVGSAKAVIVTIADKAEANRAVISLRREYPNLKIFARAKDADHASRLQNTLDVVAMVPIMPEDNVLMTLPFGGAVLKSLGAEPSEVNAILEAKRKEVLQGRGLAVNEEETVLTQLGIITEETRQAK 892          
BLAST of mRNA_H-paniculata_contig5790.13382.1 vs. uniprot
Match: B8LD81_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD81_THAPS)

HSP 1 Score: 291 bits (745), Expect = 1.820e-89
Identity = 150/265 (56.60%), Postives = 199/265 (75.09%), Query Frame = 1
Query:    1 VSGLLAMKAAVIAVISLMFGLSVANAQQTGLLLSQGGEFAFVAFGMAAGLGIIEPQLCKLLLTTVAISMAATPALSTFSAWVADQMEGRMGYDHYVGGDSESDEIRQGGEFVVVCGYGRIGRLVCELLGKKFINFVAFDNNPLKAMEARNRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDIKGTNKAVVNLRREFPDLPIFARAKDAKHQKRLASIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGYSTEEVNVLLEDTRKK 795
            V G+LA+KA ++A++SL FGLS ANA +TGL+LSQGGEFAFVAFG+A  LG+++P   K+LLT V+++MA TP L      +A +ME    + HY+G D ++ EI +   FVVV GYG +G+ VC+LL +K I +V  + +P KA++ARN+GLPVF+GDV RPEV  AFNVGKAKAVI T+SD     +AV++LRR +P+ PIFARAKDA H KRL + +DV AMVP LPED+++++LPFGGAVLRSLG   EEVN +L   RK+
Sbjct:  309 VVGILALKAGILALLSLGFGLSGANAMRTGLILSQGGEFAFVAFGLARSLGVLDPATTKMLLTCVSLTMALTPFLDEMGTKLAKKMEEGSDFTHYIGQDRDAAEITEDDGFVVVVGYGVVGKTVCDLLDRKLIKYVGMEKDPKKAIQARNKGLPVFFGDVGRPEVTEAFNVGKAKAVIVTISDKAEATRAVISLRRMYPEKPIFARAKDADHAKRLQTTLDVAAMVPILPEDNLLLTLPFGGAVLRSLGAPAEEVNYILAAKRKE 573          
BLAST of mRNA_H-paniculata_contig5790.13382.1 vs. uniprot
Match: A0A7S2WPP6_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WPP6_9STRA)

HSP 1 Score: 293 bits (749), Expect = 2.350e-87
Identity = 152/286 (53.15%), Postives = 207/286 (72.38%), Query Frame = 1
Query:    1 VSGLLAMKAAVIAVISLMFGLSVANAQQTGLLLSQGGEFAFVAFGMAAGLGIIEPQLCKLLLTTVAISMAATPALSTFSAWVADQMEGRMGYDHYVGGDSESDEIRQGGEFVVVCGYGRIGRLVCELLGKKFINFVAFDNNPLKAMEARNRGLPVFYGDVFRPEVLNAFNVGKAKAVICTLSDIKGTNKAVVNLRREFPDLPIFARAKDAKHQKRLASIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGYSTEEVNVLLEDTRKKFVLEKGLENEEDDNLFEQLGI 858
            V G LA+K  +  ++SL FGLS++ A QTGLLLSQGGEFAFVAFG+A  LGI +P + KLLLT+VA++MA TP L+     +A ++E +  + HY+G D ++ EI +  +FVVV GYG +G+ VC+LL  KFI +V  + NP KA++ARN+GLPVFYGD+ R EV  AFNVG AKAVI  ++D    N+A ++LRR +P+L IFARA DA H +RL   ++++AMVP +PED+++++LPFGGAVLRSLG   EEVN +LE  RK+ +  KGL  +E   +  QLGI
Sbjct:  521 VVGTLALKTTITTLLSLAFGLSLSTALQTGLLLSQGGEFAFVAFGLARNLGIFDPAMTKLLLTSVALTMAFTPLLADAGGKIAKKLEEKSDFTHYLGQDRDASEIAESEDFVVVVGYGTVGKSVCDLLDLKFIKYVGLEVNPNKAIQARNKGLPVFYGDIGRAEVAEAFNVGSAKAVIVCIADKAEANRAAISLRRVYPELKIFARAADADHAERLQRTLNIIAMVPVVPEDNVLLTLPFGGAVLRSLGAEPEEVNAILEIKRKEILDGKGLAEDEHQLILAQLGI 806          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5790.13382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS49_ECTSI2.170e-16890.14Similarity to sodium/hydrogen exchanger and potass... [more]
A0A835Z5B4_9STRA5.060e-12870.13Sodium/hydrogen exchanger family-domain-containing... [more]
A0A4D9DB16_9STRA1.190e-9861.36RCK N-terminal domain-containing protein n=2 Tax=M... [more]
A0A7S1ZA81_TRICV6.610e-9855.24Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4VD07_9STRA1.570e-9654.90Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2I2V9_9STRA1.080e-9353.50Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1FUH2_9STRA2.730e-9151.83Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2XSK7_9STRA4.260e-9052.54Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B8LD81_THAPS1.820e-8956.60Predicted protein (Fragment) n=1 Tax=Thalassiosira... [more]
A0A7S2WPP6_9STRA2.350e-8753.15Hypothetical protein n=2 Tax=Eucampia antarctica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5790contigH-paniculata_contig5790:220..4766 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score502.3
Seed ortholog evalue2.2e-139
Seed eggNOG ortholog2880.D8LS49
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.solute:proton antiporter activity
EggNOG OGsCOG0475@1,KOG1650@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1278
Cds size1260
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930627.7951696-UTR-H-paniculata_contig5790:219..2371622930627.7951696-UTR-H-paniculata_contig5790:219..237Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5790 220..237 +
1691481379.2655272-UTR-H-paniculata_contig5790:219..2371691481379.2655272-UTR-H-paniculata_contig5790:219..237Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5790 220..237 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930627.810974-CDS-H-paniculata_contig5790:237..3241622930627.810974-CDS-H-paniculata_contig5790:237..324Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5790 238..324 +
1691481379.2798567-CDS-H-paniculata_contig5790:237..3241691481379.2798567-CDS-H-paniculata_contig5790:237..324Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5790 238..324 +
1622930627.8283045-CDS-H-paniculata_contig5790:798..9481622930627.8283045-CDS-H-paniculata_contig5790:798..948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5790 799..948 +
1691481379.2876449-CDS-H-paniculata_contig5790:798..9481691481379.2876449-CDS-H-paniculata_contig5790:798..948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5790 799..948 +
1622930627.842844-CDS-H-paniculata_contig5790:1583..17801622930627.842844-CDS-H-paniculata_contig5790:1583..1780Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5790 1584..1780 +
1691481379.2953877-CDS-H-paniculata_contig5790:1583..17801691481379.2953877-CDS-H-paniculata_contig5790:1583..1780Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5790 1584..1780 +
1622930627.8625429-CDS-H-paniculata_contig5790:2284..24381622930627.8625429-CDS-H-paniculata_contig5790:2284..2438Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5790 2285..2438 +
1691481379.303352-CDS-H-paniculata_contig5790:2284..24381691481379.303352-CDS-H-paniculata_contig5790:2284..2438Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5790 2285..2438 +
1622930627.8785937-CDS-H-paniculata_contig5790:3208..34131622930627.8785937-CDS-H-paniculata_contig5790:3208..3413Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5790 3209..3413 +
1691481379.3115747-CDS-H-paniculata_contig5790:3208..34131691481379.3115747-CDS-H-paniculata_contig5790:3208..3413Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5790 3209..3413 +
1622930627.8967066-CDS-H-paniculata_contig5790:4299..47661622930627.8967066-CDS-H-paniculata_contig5790:4299..4766Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5790 4300..4766 +
1691481379.32086-CDS-H-paniculata_contig5790:4299..47661691481379.32086-CDS-H-paniculata_contig5790:4299..4766Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5790 4300..4766 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5790.13382.1prot_H-paniculata_contig5790.13382.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5790 238..4766 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5790.13382.1

>prot_H-paniculata_contig5790.13382.1 ID=prot_H-paniculata_contig5790.13382.1|Name=mRNA_H-paniculata_contig5790.13382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=420bp
MKAAVIAVISLMFGLSVANAQQTGLLLSQGGEFAFVAFGMAAGLGIIEPQ
LCKLLLTTVAISMAATPALSTFSAWVADQMEGRMGYDHYVGGDSESDEIR
QGGEFVVVCGYGRIGRLVCELLGKKFINFVAFDNNPLKAMEARNRGLPVF
YGDVFRPEVLNAFNVGKAKAVICTLSDIKGTNKAVVNLRREFPDLPIFAR
AKDAKHQKRLASIMDVVAMVPTLPEDSIIVSLPFGGAVLRSLGYSTEEVN
VLLEDTRKKFVLEKGLENEEDDNLFEQLGISRSQVQSYKTDGSGGAAASE
DGTLTSQTPSGEGQNLRDATPPAVTAVAAAAVVTPLVDGSSSGATAASDG
GGGGGAVPGTVPGTGGDMMAGVSEEAMAALLAAESAALEEVEKTKALAAA
EAAAALEAAVASGDVVYPTN
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mRNA from alignment at H-paniculata_contig5790:220..4766+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5790.13382.1 ID=mRNA_H-paniculata_contig5790.13382.1|Name=mRNA_H-paniculata_contig5790.13382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4547bp|location=Sequence derived from alignment at H-paniculata_contig5790:220..4766+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCTCAGGACTGCTGGCGATGAAAGCGGCTGTTATCGCTGTCATCAGTCT CATGTTCGGCTTGTCCGTCGCCAATGCTCAGCAGACGGGGCTCCTCCTCA GCCAGGTTTGGTTGTTCCCCTGTTTAGTTTCTTTCCGTTTGTATCCGATC GAAATTTTGCCTTTTCTATAGTGCCATATTGAAGATCCATGTGAAATTTC GCATCTCTACATGGCTAGTTGTATACTTCCACGTGCTGATGCTTTGTGTA GTACAGCCTCGTATACGCCCCCGTTCACTTGAAGCTTTTTTCGTCCTCTC GTACAAGGTACCCATAAAAACAATTACAGAGAAAAAAAATGGAGCCACCC CACAAAACGGAATGTTCGTTAAGACATGTTTTAATTAATCTAAAAAAAAT ACCTTGGCTAGAATACGGAGTCAAAACTGTTGAAAAATTCAATCGCCCAC CAGCCACACAAGGCGTCATTGCTTTTTGGGGTTTTTCTCGTCTTGCTTCT TATTTTTTTTTACAGTAAATGCTAAAAAAAAAAAAACTCACCCGTCTATC TCGTGTTTAAAAATCATGTTATTTCTCAGGGAGGCGAGTTTGCTTTCGTA GCGTTCGGCATGGCGGCAGGGCTCGGTATCATCGAACCGCAGCTTTGCAA GTTGCTGCTAACGACGGTGGCCATCAGCATGGCGGCCACCCCGGCTCTCT CCACGTTCTCCGCGTGGGTCGCGGATCAAGTGAGATGACATGGCCTCATT AGCACCGAGTATAATAGCTGCAGAGGGCTGATGGACAACGACAGTTGCAC TGGCAATGGCAACGCGATTTGATTGGTTGAACTGTTGTAGTAGTCCAACT TGGCGTTGTTTTTAGTCCAAATTGTGAACAAATAATACGAATGGCTGTCG TTTTTTTTTTATCGTAGGTGGCGTAAATCAAATACGCTTGGTGGGAGGGG GGGATGCGATACAGCAAGCCGGAAGGAATAGTATATTTGGTATAACTTTG AAGCTGTTCATAAATTGTACATGATAGATTGAGTTAAAAGTTGTTACTTT TTTTTTTTAAATGCAACAAACCAATCAACCGTTATTTTGTATCTCATGAC TATACGCACATATGTTACAGCACATATGCATCGAAATACGAACACGTTTA ATAAAAAAATAAAAATCTGAAAAATAAAAAGAGATTGCTTTTTACCATCT GATTCTTGATAGGGCAGCACTTGCCAAAATTCACAGTTCACCATAGTATG CAGTAATGGGGTCTCTCATCTTATGTCATTACTGTTACCGAATCGTTTCA AAACACACGGTGTTTACCCCCTATCTTGTACCTTGTTGTTCTATTTTGTG ATGGATTCACCTAGATGGAAGGGCGCATGGGTTATGACCATTACGTGGGC GGGGACTCCGAGTCCGACGAGATCCGTCAGGGTGGGGAGTTTGTAGTTGT TTGTGGCTACGGTCGCATCGGACGTCTGGTGTGCGAGCTCCTGGGCAAGA AGTTCATTAACTTCGTGGCCTTCGACAACAATCCGCTCAAGGCTATGGAG GCGCGAAATCGGTCAGTACAGTGGCGCGTGTACACACGAGGATTACAAAT TGGAACACAAAATTCTACCAAGACATGACAAATGTGTCCAATTTATATTT ATATGTATATACTTTTTTCTTTCTTTTTCATGATGGCATAACAATGTGAC ATGCTGTGTACCCAGAAGCTGCTGGTCATACTTACGAAGGATATGGCGCG ATAAATAGCTCTTACAGTGTTTGCCACGACAGTGTTCTCACAAGACATTT TCTTTGTAATTTATTTGTCCTATTTGTCCTATTTGTTGTTGTTGTTGTTG TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGT GGTGGTGGTGTGTCGCCACAGTCTGAGAGTCTACCAAGTGTTCAACTTGA TTTCGTTGAACCGGCTGTGCTTGTTTCACTCGCATAAGCTATTGTTATTA CGTTTCTCTCTCTCTCTCTTCTACACCCTGTGCATCCGGTCTCCTTTCCC TGTCTGTTTCTATAGCGGTTTGCCTGTGTTCTACGGAGACGTGTTCCGCC CCGAGGTACTTAACGCTTTCAACGTGGGCAAGGCTAAGGCGGTTATCTGC ACTCTTTCCGACATAAAGGGCACCAACAAGGCGGTTGTCAATCTTAGGAG GGAGTTCCCCGATTTGCCGGTGCGTTTTCTTGTTGCTGGGTGGATGAAGC ACTCGAGGGCTTTAATTTTTTTTTTATGCATGTGTGTGGCTTTTTACGGT GTAAAACGTGTTTGTTGTCTTTTTTCCCTTACTTCCAAGCTGAACACTCA TGCTTTTTGAGAGGATGCTAGTTTATGGTGTACATTGGCGTGGCTGATAC TATCAGCGCCGTACCCCTGATTATAATATTGTTGCTCACCCAAAATCTCG ACTTCCATGGTCCTGTCCCGTCCTAACACGGTTTTATATTTCCCCGACGT AATCTCTCGGCCCTTTATCAACCTTTGAATAATTGCTACCCTTTTTTGTT TTATTCTTGATTTCTTTCTCTCTCTCTCTCTCTATATATATATATTCCAA AATATGTCCTTTTTACCTGCCCAAACACAGGCCTTAGCTGCTCAGGGCAA CAGACACAATATCTTAACTTGAGCACTTCCTCGTCAATCCATCTATCTAG ATGGAAGCGATTTTATATTTTTCTCACCTCTAATGTTGTGTTGTGTGGGG TGATGGTCTGCGATTTTAGCACCGACGTTTCTTGCCCTCCTTGCTGATGT AATTTTGACGATGAGTCTATAAGGGAAGTTTGAGGTTTACTGCATGACGT TCATCCCCTCCTCGCCTCCCCGCGTGATACGTTTTGTGTCTCTCGCTGTG GCGTCATCTCTTGTGTTTTCTGTCCGTGCGTGGTCGACCCGTATCTTGTG CTGTGCTAATATCTTGTCTTACCGACGGCGAGAGAACAGATCTTCGCCCG TGCGAAGGACGCTAAGCACCAAAAACGCCTGGCGTCGATCATGGATGTAG TGGCTATGGTGCCCACTCTGCCAGAGGACTCAATCATCGTCAGCTTGCCC TTCGGAGGGGCGGTGCTTCGCAGCTTGGGTTACTCGACGGAGGAGGTGAA CGTGTTGCTCGAGGACACCAGGAAGAAGTTTGTACTAGAGAAGGGTAAGT GCCCGCAGGAGGGGGGGGGGGTGCTGGTGCTGCCCGTCGTTGCTTGCAAT TCAAGGAAGCGGGGATATGATGGGTGGGTGCGATTGTTATATGATTTTGC TCTGTGTTTGATGTCTCGTGAATAACTGAAGCAGCAGCAGCACAGAGGGA GTCTGTTTTAGCGTGTGTGTATATGTAGTGTGTTTTGTTTTTTGTCTTTC GTTATGCATTTAACAGATGGTACCCATAAGGATAATGCGATAAGAATTTG GCTGTACAATTTAAAGTTCATTTCATATGATACAACAACGGCATCGGTTT CATTTCGAAGGGGCTATTTTACACTGCATGCCGCCAATGTCAAACCTCCG CCGAACATATCTTGAAGGCACTATAAAAAAATCGTGCTGCTCAGCTCAAT CTATCGAATTTTGTCCTGAGATTTGACAGATGATTTGCAACACACTCGCT GAAACATTCGAGTAAGGTCATTTTTGTTTTCAAGTTATGGCCGACTTTCG ATTCATGTGGGTGTTTCATATGGCCGTAACTTGATAAAGACTCAAAGCCA CGATAACCTTACTCGAATGTCTCGGCGTGTGTGTTGCAAATCATCTGTCA AAATTTCAGGACAAGATTCGATAAATTGAGCTGGCAGCCTGATTCTGCCG TTTCAACTATCTTGGTCGGTCCAGCTTGTTGTCTACCATACTATACCATA CCATACTCAAGCCGTACGAACATGTTTGTCTCGCTTGGCAGCCACGCACC ATGCAAGACAAAAGACAACAGACAAGCATGTATATCTTATTGTTCCCAAA TAGCTCAACCATAATCCTCACACAAGACAAGGTTCATAGATTTTGTCCGT TTTTGTGATACATATACATACTGCATGCAGGACTGGAGAACGAAGAGGAC GACAATTTATTCGAGCAGTTGGGCATCTCAAGGTCTCAGGTCCAAAGCTA TAAGACGGATGGCAGCGGCGGTGCCGCTGCTAGCGAGGATGGCACCCTCA CCTCCCAAACCCCCTCGGGCGAAGGACAGAATCTACGAGACGCTACGCCC CCCGCCGTCACGGCAGTCGCCGCAGCCGCTGTGGTTACGCCCCTGGTCGA TGGCAGCAGTAGCGGCGCCACTGCCGCCTCCGACGGGGGAGGAGGAGGAG GAGCAGTCCCAGGAACGGTCCCCGGAACCGGTGGCGATATGATGGCGGGC GTGTCCGAGGAGGCCATGGCAGCATTGTTGGCGGCGGAGTCCGCGGCGCT CGAGGAAGTGGAGAAAACCAAAGCATTGGCAGCGGCGGAAGCGGCTGCCG CTCTGGAGGCGGCGGTCGCGTCGGGTGATGTTGTGTACCCGACCAAC
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Coding sequence (CDS) from alignment at H-paniculata_contig5790:220..4766+

>mRNA_H-paniculata_contig5790.13382.1 ID=mRNA_H-paniculata_contig5790.13382.1|Name=mRNA_H-paniculata_contig5790.13382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2520bp|location=Sequence derived from alignment at H-paniculata_contig5790:220..4766+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAGCGGCTGTTATCGCTGTCATCAGTCTCATGTTCGGCTTGTCCGT
CGCCAATGCTCAGCAGACGGGGCTCCTCCTCAGCCAGATGAAAGCGGCTG
TTATCGCTGTCATCAGTCTCATGTTCGGCTTGTCCGTCGCCAATGCTCAG
CAGACGGGGCTCCTCCTCAGCCAGGGAGGCGAGTTTGCTTTCGTAGCGTT
CGGCATGGCGGCAGGGCTCGGTATCATCGAACCGCAGCTTTGCAAGTTGC
TGCTAACGACGGTGGCCATCAGCATGGCGGCCACCCCGGCTCTCTCCACG
TTCTCCGCGTGGGTCGCGGATCAAGGAGGCGAGTTTGCTTTCGTAGCGTT
CGGCATGGCGGCAGGGCTCGGTATCATCGAACCGCAGCTTTGCAAGTTGC
TGCTAACGACGGTGGCCATCAGCATGGCGGCCACCCCGGCTCTCTCCACG
TTCTCCGCGTGGGTCGCGGATCAAATGGAAGGGCGCATGGGTTATGACCA
TTACGTGGGCGGGGACTCCGAGTCCGACGAGATCCGTCAGGGTGGGGAGT
TTGTAGTTGTTTGTGGCTACGGTCGCATCGGACGTCTGGTGTGCGAGCTC
CTGGGCAAGAAGTTCATTAACTTCGTGGCCTTCGACAACAATCCGCTCAA
GGCTATGGAGGCGCGAAATCGATGGAAGGGCGCATGGGTTATGACCATTA
CGTGGGCGGGGACTCCGAGTCCGACGAGATCCGTCAGGGTGGGGAGTTTG
TAGTTGTTTGTGGCTACGGTCGCATCGGACGTCTGGTGTGCGAGCTCCTG
GGCAAGAAGTTCATTAACTTCGTGGCCTTCGACAACAATCCGCTCAAGGC
TATGGAGGCGCGAAATCGCGGTTTGCCTGTGTTCTACGGAGACGTGTTCC
GCCCCGAGGTACTTAACGCTTTCAACGTGGGCAAGGCTAAGGCGGTTATC
TGCACTCTTTCCGACATAAAGGGCACCAACAAGGCGGTTGTCAATCTTAG
GAGGGAGTTCCCCGATTTGCCGCGGTTTGCCTGTGTTCTACGGAGACGTG
TTCCGCCCCGAGGTACTTAACGCTTTCAACGTGGGCAAGGCTAAGGCGGT
TATCTGCACTCTTTCCGACATAAAGGGCACCAACAAGGCGGTTGTCAATC
TTAGGAGGGAGTTCCCCGATTTGCCGATCTTCGCCCGTGCGAAGGACGCT
AAGCACCAAAAACGCCTGGCGTCGATCATGGATGTAGTGGCTATGGTGCC
CACTCTGCCAGAGGACTCAATCATCGTCAGCTTGCCCTTCGGAGGGGCGG
TGCTTCGCAGCTTGGGTTACTCGACGGAGGAGGTGAACGTGTTGCTCGAG
GACACCAGGAAGAAGTTTGTACTAGAGAAGGATCTTCGCCCGTGCGAAGG
ACGCTAAGCACCAAAAACGCCTGGCGTCGATCATGGATGTAGTGGCTATG
GTGCCCACTCTGCCAGAGGACTCAATCATCGTCAGCTTGCCCTTCGGAGG
GGCGGTGCTTCGCAGCTTGGGTTACTCGACGGAGGAGGTGAACGTGTTGC
TCGAGGACACCAGGAAGAAGTTTGTACTAGAGAAGGGACTGGAGAACGAA
GAGGACGACAATTTATTCGAGCAGTTGGGCATCTCAAGGTCTCAGGTCCA
AAGCTATAAGACGGATGGCAGCGGCGGTGCCGCTGCTAGCGAGGATGGCA
CCCTCACCTCCCAAACCCCCTCGGGCGAAGGACAGAATCTACGAGACGCT
ACGCCCCCCGCCGTCACGGCAGTCGCCGCAGCCGCTGTGGTTACGCCCCT
GGTCGATGGCAGCAGTAGCGGCGCCACTGCCGCCTCCGACGGGGGAGGAG
GAGGAGGAGCAGTCCCAGGAACGGTCCCCGGAACCGGTGGCGATATGATG
GCGGGCGTGTCCGAGGAGGCCATGGCAGCATTGTTGGCGGCGGAGTCCGC
GGCGCTCGAGGAAGTGGAGAAAACCAAAGCATTGGCAGCGGCGGAAGCGG
CTGCCGCTCTGGAGGCGGCGGTCGCGTCGGGTGATGTTGTGTACCCGACC
AACGACTGGAGAACGAAGAGGACGACAATTTATTCGAGCAGTTGGGCATC
TCAAGGTCTCAGGTCCAAAGCTATAAGACGGATGGCAGCGGCGGTGCCGC
TGCTAGCGAGGATGGCACCCTCACCTCCCAAACCCCCTCGGGCGAAGGAC
AGAATCTACGAGACGCTACGCCCCCCGCCGTCACGGCAGTCGCCGCAGCC
GCTGTGGTTACGCCCCTGGTCGATGGCAGCAGTAGCGGCGCCACTGCCGC
CTCCGACGGGGGAGGAGGAGGAGGAGCAGTCCCAGGAACGGTCCCCGGAA
CCGGTGGCGATATGATGGCGGGCGTGTCCGAGGAGGCCATGGCAGCATTG
TTGGCGGCGGAGTCCGCGGCGCTCGAGGAAGTGGAGAAAACCAAAGCATT
GGCAGCGGCGGAAGCGGCTGCCGCTCTGGAGGCGGCGGTCGCGTCGGGTG
ATGTTGTGTACCCGACCAAC
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