prot_H-paniculata_contig5788.13379.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5788.13379.1
Unique Nameprot_H-paniculata_contig5788.13379.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length442
Homology
BLAST of mRNA_H-paniculata_contig5788.13379.1 vs. uniprot
Match: D7G045_ECTSI (Similar to fidipidine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G045_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 3.010e-74
Identity = 183/417 (43.88%), Postives = 237/417 (56.83%), Query Frame = 0
Query:   78 MQEEAEQAREYSCKLAQEISRLERIEHGLLPDQRSTLETLRRLIATSTALEHQEQSVLEEFRSREAALRAEIDDFRGGAATGATTGRAPSAESSGQEGAAVGQGKSQEASASGASSVRGGS-------------------------EDPLAEPRLDEGNDDALQTSREDELLQQQ----------------------------QRQRQHQQHPAGAITPIATPSLEGKALLAEGLHRIEAAHEAAAAEREMLATRLSRLRLAVARRQREEDATPGHAELLQYLLRFEELGKHAREREKQLRGCQAERSTLARTREILANESRALEAIASGVDDAAHKHKAARETFVRQLTGMIKGVEDSISNQARLLEASRDRRRAAEETREAVAEEKKRFLKGARDLAEACMKYEGLKAHLSLMRR 441
            M+EEAEQAR+Y  KLAQE++RL RI   L PD+ ++LE LRRL+AT T +E QEQ+ LE+ ++REAALRAEI +F     TG TT      E  G  G  +G+  +                                        +DPLA                                                    +R+  H++ PA          LEGKAL AEGLHRIEAA+E AAAERE  A RLSRLRLAVARRQREED   GHAELLQYLLRFEELG+H+ ER++QLR C+AERSTL+ TRE+LA ++R LE IA GV++A+   K  RE ++RQ+ G+++ VEDS+ +Q RLL+  R RR  AEE + +V E++KRF  G ++L++ C +YE L AHL+LMRR
Sbjct:    1 MEEEAEQARDYGNKLAQEMARLGRITRTLAPDESASLEKLRRLVATLTEIERQEQAALEQGKAREAALRAEIAEF-----TGETT------EDVGGGGDGLGEKPAAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLEKTVDDPLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAERKANHRKKPA----------LEGKALFAEGLHRIEAAYEVAAAEREESAARLSRLRLAVARRQREEDVALGHAELLQYLLRFEELGQHSLERQEQLRRCRAERSTLSLTRELLATQARLLETIAGGVEEASKGGKGVREAYLRQIKGIVESVEDSLEDQTRLLDNVRRRRHVAEELQASVREDRKRFFAGTKELSDECYRYESLNAHLALMRR 396          
BLAST of mRNA_H-paniculata_contig5788.13379.1 vs. uniprot
Match: A0A6H5JTA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTA4_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 9.120e-72
Identity = 179/383 (46.74%), Postives = 224/383 (58.49%), Query Frame = 0
Query:   42 EHQEDVRKLRARGGELEERLAVARSGLASALERREFMQEEAEQAREYSCKLAQEISRLERIEHGLLPDQRSTLETLRRLIATSTALEHQEQSVLEEFRSREAALRAEIDDFRGGAATGATTGR------------------------APSAESSGQEGAAVGQGKS-----------------------QEASASGASSVRGGSEDPLAEPRLDEGNDDALQTSREDELLQQQQRQRQHQQHPAGAITPIATPSLEGKALLAEGLHRIEAAHEAAAAEREMLATRLSRLRLAVARRQREEDATPGHAELLQYLLRFEELGKHAREREKQLRGCQAERSTLARTREILANESRALEAIASGVDDAAHKHKAARETFVRQLTGMI 377
            + Q +V  LR RG ELEERL  AR  L SA ERREFM+EEAEQAR+Y  KLAQE++RL RI   L PD+ ++LE LRRL+AT T +E QEQ+ LE+ ++REAALR EI +F     TG TTG                         A +   +G+ G   G+G+                        QE   SGA ++ G      A P    G    L+T+    +L            PA        P+LEGKAL AEGLHRIEAA+E A AERE  A RLSRLRLAVARRQREEDA  GHAELLQYLLRFEELG+H+ ER++QLR C+AER  L+ TRE+LA ++R LE IA GV++A+   K  RE ++RQ+ G++
Sbjct:    4 QRQAEVLSLRERGAELEERLQAARIALTSARERREFMEEEAEQARDYGDKLAQEMARLGRITRTLPPDESASLEKLRRLVATLTEIERQEQAALEQGKAREAALRTEIAEF-----TGETTGDGXXXXXXXXXXXXXXXXXXXDAAPATAGAPAGEGGGRAGKGREGGGFVLEKAVDDPLAAMAEPQEHQEEDKSGAGNIVG------AVPAAGVGTVSVLRTA---VVLGXXXXXXXXXXXPAERANHRKKPALEGKALFAEGLHRIEAAYEVAVAEREESAARLSRLRLAVARRQREEDAALGHAELLQYLLRFEELGQHSLERQEQLRRCRAERLMLSLTRELLAKQARLLETIAGGVEEASTGGKGVREAYLRQIKGIV 372          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5788.13379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G045_ECTSI3.010e-7443.88Similar to fidipidine n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JTA4_9PHAE9.120e-7246.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 68..88
NoneNo IPR availableCOILSCoilCoilcoord: 391..411
NoneNo IPR availablePANTHERPTHR16441:SF0COILED-COIL DOMAIN-CONTAINING PROTEIN 93coord: 31..160
coord: 252..437
IPR039116Coiled-coil domain-containing protein 93PANTHERPTHR16441FIDIPIDINEcoord: 31..160
IPR039116Coiled-coil domain-containing protein 93PANTHERPTHR16441FIDIPIDINEcoord: 252..437

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5788contigH-paniculata_contig5788:7091..10224 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5788.13379.1mRNA_H-paniculata_contig5788.13379.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5788 6609..10426 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5788.13379.1 ID=prot_H-paniculata_contig5788.13379.1|Name=mRNA_H-paniculata_contig5788.13379.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=442bp
MEQAVVSPTGDDQRSSDGHVGGGGTLLGTAEAAERESTRGREHQEDVRKL
RARGGELEERLAVARSGLASALERREFMQEEAEQAREYSCKLAQEISRLE
RIEHGLLPDQRSTLETLRRLIATSTALEHQEQSVLEEFRSREAALRAEID
DFRGGAATGATTGRAPSAESSGQEGAAVGQGKSQEASASGASSVRGGSED
PLAEPRLDEGNDDALQTSREDELLQQQQRQRQHQQHPAGAITPIATPSLE
GKALLAEGLHRIEAAHEAAAAEREMLATRLSRLRLAVARRQREEDATPGH
AELLQYLLRFEELGKHAREREKQLRGCQAERSTLARTREILANESRALEA
IASGVDDAAHKHKAARETFVRQLTGMIKGVEDSISNQARLLEASRDRRRA
AEETREAVAEEKKRFLKGARDLAEACMKYEGLKAHLSLMRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039116CCDC93