prot_H-paniculata_contig5788.13378.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5788.13378.1
Unique Nameprot_H-paniculata_contig5788.13378.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length228
Homology
BLAST of mRNA_H-paniculata_contig5788.13378.1 vs. uniprot
Match: D7FS13_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS13_ECTSI)

HSP 1 Score: 368 bits (944), Expect = 2.370e-125
Identity = 178/227 (78.41%), Postives = 198/227 (87.22%), Query Frame = 0
Query:    1 MSPTDDHFMTGSVDRTVRLWNLSRPECLAILEFPASSGTPHVAYDQQGLVFAATTSLGATNIIKLYDARNYEKGPFDTFTVENAKVEEFLSQKPDMKPKRAQVLSQARWTSMKFSADGQSILIATDASLVLTLGAFEGDVKQVFTGHFNEKQSTLDACFTPNAEYVLSGSEDRGIYVWRSGDGKLSKVLRGHSGPVGRVCCSPKFEVIASACSNTALWIDAGLDSTQ 227
            MSPTDDHFMTGS D+TVRLW+LSRP+CLA+LEFP   GTP+VAYDQQGLVFAA TS G  NIIKLYDARNYEKGPFDTFTVE+ KVEEF+ +  +M+ K+A+ LS ARW SMKFSADGQSILIATDASLVLTL AFEGDVKQVFTGH N+  S LDACFTPNAEYVLSGSED GIY WR+ DGKL+K+L+GHS  VGRV CSPK+EVIASAC+NTALWIDAGL+  Q
Sbjct:  136 MSPTDDHFMTGSADKTVRLWHLSRPQCLAVLEFPPGHGTPYVAYDQQGLVFAAATSTGKANIIKLYDARNYEKGPFDTFTVEHKKVEEFIVKSKEMRSKKARALSLARWKSMKFSADGQSILIATDASLVLTLHAFEGDVKQVFTGHQNDLHSELDACFTPNAEYVLSGSEDSGIYAWRAEDGKLAKILKGHSSAVGRVLCSPKYEVIASACTNTALWIDAGLEPGQ 362          
BLAST of mRNA_H-paniculata_contig5788.13378.1 vs. uniprot
Match: A0A835Z8J7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J7_9STRA)

HSP 1 Score: 292 bits (748), Expect = 8.780e-96
Identity = 139/220 (63.18%), Postives = 175/220 (79.55%), Query Frame = 0
Query:    1 MSPTDDHFMTGSVDRTVRLWNLSRPECLAILEFPASSGTPHVAYDQQGLVFAATTSLGATNIIKLYDARNYEKGPFDTFTVENAKVEEFLSQK-PDMKPKRAQVLSQARWTSMKFSADGQSILIATDASLVLTLGAFEGDVKQVFTGHFNEKQSTLDACFTPNAEYVLSGSEDRGIYVWRSGDGKLSKVLRGHSGPVGRVCCSPKFEVIASACSNTALWI 219
            MSP DD FMTGS DR+VRLWNLS PECL +L+FP +S  PHVAYD  GLVFAAT S+GA N IKLYDARNYE+GPF+T+T+++  V +FL ++  +++ ++AQ L++ARWT++KFSADG +IL++TDASL++ L A+E  VKQVF GH N+  S LDACFT +A++VLSGSED  IY WR+ DG L   LRGH G VG V CSPKFEV+ASAC NTALW+
Sbjct:  118 MSPVDDCFMTGSTDRSVRLWNLSAPECLGVLQFPLNSSAPHVAYDPSGLVFAATASIGAANFIKLYDARNYEQGPFNTYTLQHNMVADFLCKRLKNIQRQQAQALARARWTNLKFSADGMNILVSTDASLIIMLDAYECSVKQVFLGHVNDNGSELDACFTADAQHVLSGSEDSQIYAWRTEDGALVSTLRGHVGSVGLVACSPKFEVVASACINTALWL 337          
BLAST of mRNA_H-paniculata_contig5788.13378.1 vs. uniprot
Match: A0A7S2V378_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V378_9STRA)

HSP 1 Score: 269 bits (688), Expect = 1.590e-86
Identity = 131/220 (59.55%), Postives = 168/220 (76.36%), Query Frame = 0
Query:    1 MSPTDDHFMTGSVDRTVRLWNLSRPECLAILEFPASSGTPHVAYDQQGLVFAATTSLGATNIIKLYDARNYEKGPFDTFTVENAKVEEFLSQK-PDMKPKRAQVLSQARWTSMKFSADGQSILIATDASLVLTLGAFEGDVKQVFTGHFNEKQSTLDACFTPNAEYVLSGSEDRGIYVWRSGDGKLSKVLRGHSGPVGRVCCSPKFEVIASACSNTALWI 219
            M P DD+F+TG++DR+VRLW+L RP CLA+L+FP SSG P VAYD  G+VFAA+ SL   N+IK+YDAR YEKGPFDTF +E+  V +FL+++ P M+ ++AQ L++A WT + FS DG  +LI+TDASL L L AFEG + QVFTGH N+  S LDACF+P+ +YVLSGSED  IY +R+  G L   L GH G V RV CSP++EV+ASAC+NTALWI
Sbjct:  136 MCPVDDNFITGAMDRSVRLWHLQRPTCLAVLQFPVSSGAPLVAYDPTGVVFAASASLATANMIKMYDARQYEKGPFDTFMLEHDVVADFLARRMPRMQTQQAQTLARASWTRLTFSQDGGCLLISTDASLCLMLDAFEGKIVQVFTGHTNDNGSELDACFSPDVKYVLSGSEDGQIYSYRTDTGGLVTKLSGHVGAVRRVACSPRYEVVASACTNTALWI 355          
BLAST of mRNA_H-paniculata_contig5788.13378.1 vs. uniprot
Match: A0A3M6U4U0_POCDA (Uncharacterized protein n=5 Tax=Scleractinia TaxID=6125 RepID=A0A3M6U4U0_POCDA)

HSP 1 Score: 176 bits (446), Expect = 1.410e-50
Identity = 88/220 (40.00%), Postives = 136/220 (61.82%), Query Frame = 0
Query:    1 MSPTDDHFMTGSVDRTVRLWNLSRPECLAILEFPASSGTPHVAYDQQGLVFAATTSLGATNIIKLYDARNYEKGPFDTFTVENAKVEEFLSQKPDMKPKRAQVLSQARWTSMKFSADGQSILIATDASLVLTLGAFEGDVKQVFTGHFNEKQSTLDACFTPNAEYVLSGSEDRGIYVWRSGDGKLSKVLRG-HSGPVGRVCCSPKFEVIASACSNTALWI 219
            MSP DD F++GS+DRT+RLW+L  P C  ++     +G P  A+D +GL+FAA      + ++KLYD R+++KGPF TF ++N          P ++           WT +KFS+DG+ IL+AT+  ++  + AF+G     FTGH   + + ++ CFTP+A+YV+SGS+D  ++VW S  G+   VL G H GP+  V  +PK+ ++ASAC+N A W+
Sbjct:  115 MSPMDDTFVSGSLDRTLRLWDLRSPNCQGLMHV---NGRPVAAFDPEGLIFAAGVD---SEMVKLYDLRSFDKGPFSTFHIQND---------PSIE-----------WTGVKFSSDGKMILLATNGGVIHLIDAFQGTQLHTFTGHTVTRSTPVEVCFTPDAQYVISGSQDGRVHVWGSDSGQKLTVLEGNHPGPIQCVAFNPKYMMLASACTNMAFWL 308          
BLAST of mRNA_H-paniculata_contig5788.13378.1 vs. uniprot
Match: UPI00193A6927 (WD repeat-containing protein 82-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A6927)

HSP 1 Score: 175 bits (444), Expect = 2.160e-50
Identity = 92/220 (41.82%), Postives = 134/220 (60.91%), Query Frame = 0
Query:    1 MSPTDDHFMTGSVDRTVRLWNLSRPECLAILEFPASSGTPHVAYDQQGLVFAATTSLGATNIIKLYDARNYEKGPFDTFTVENAKVEEFLSQKPDMKPKRAQVLSQARWTSMKFSADGQSILIATDASLVLTLGAFEGDVKQVFTGHFNEKQSTLDACFTPNAEYVLSGSEDRGIYVWRSGDGKLSKVLRG-HSGPVGRVCCSPKFEVIASACSNTALWI 219
            MSP DD F++GS+D+T+RLW+L  P C  ++  P   G P  ++D +GL+FAA  +   + +IKLYD R+++KGPF TF +            PD             WT +KFS+DG+ ILI+T+ S +  + AF G+  Q F GH N K   L+A F+P+A+Y+LSGS+D  I+VW + DG  + VL G H GP+  V  +P++ +IAS CSN A W+
Sbjct:  116 MSPVDDTFLSGSLDKTIRLWDLRSPNCQGLMHLP---GRPCASFDPEGLIFAAGIN---SEMIKLYDLRSFDKGPFTTFRLT-----------PD---------KDCDWTRLKFSSDGKMILISTNGSTLRLIDAFHGEPLQTFMGHINTKGLYLEASFSPDAQYILSGSQDGRIHVWSTEDGSKTAVLDGKHPGPLQCVQFNPRYMMIASTCSNMAFWL 309          
BLAST of mRNA_H-paniculata_contig5788.13378.1 vs. uniprot
Match: Q54XN8_DICDI (ANAPC4_WD40 domain-containing protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54XN8_DICDI)

HSP 1 Score: 173 bits (439), Expect = 1.380e-49
Identity = 88/219 (40.18%), Postives = 136/219 (62.10%), Query Frame = 0
Query:    1 MSPTDDHFMTGSVDRTVRLWNLSRPECLAILEFPASSGTPHVAYDQQGLVFAATTSLGATNIIKLYDARNYEKGPFDTFTVENAKVEEFLSQKPDMKPKRAQVLSQARWTSMKFSADGQSILIATDASLVLTLGAFEGDVKQVFTGHFNEKQSTLDACFTPNAEYVLSGSEDRGIYVWRSGDGKLSKVLRGHSGPVGRVCCSPKFEVIASACSNTALWI 219
            MSP +D F++GS+D T+R+W+L    C  +L     +G P V++D QG++FA   S+   N IKLYD RNY+KGPF +F++++    E                    WTSMKF+ADG+ IL++T  +++  + +F G+VKQ +T   N+  S +++ F+P+A+YVLSGSED  +++W++  G+   V  GHS  VGRV  +P+  + A+ACSN A WI
Sbjct:  121 MSPINDMFLSGSLDDTIRMWDLRTNVCQGLLR---RNGRPAVSFDPQGIIFATAVSV---NTIKLYDLRNYDKGPFSSFSIDHPIPVE--------------------WTSMKFTADGKYILLSTKTNIIFLIDSFTGEVKQRYTSFKNDNGSVIESSFSPDAQYVLSGSEDGTVHIWKTLTGEEVAVWGGHSSTVGRVQWNPRSMMAATACSNLAFWI 313          
BLAST of mRNA_H-paniculata_contig5788.13378.1 vs. uniprot
Match: A0A6F9DX34_9ASCI (WD repeat-containing protein 82-like n=4 Tax=Phlebobranchia TaxID=7716 RepID=A0A6F9DX34_9ASCI)

HSP 1 Score: 172 bits (437), Expect = 2.410e-49
Identity = 90/220 (40.91%), Postives = 132/220 (60.00%), Query Frame = 0
Query:    1 MSPTDDHFMTGSVDRTVRLWNLSRPECLAILEFPASSGTPHVAYDQQGLVFAATTSLGATNIIKLYDARNYEKGPFDTFTVENAKVEEFLSQKPDMKPKRAQVLSQARWTSMKFSADGQSILIATDASLVLTLGAFEGDVKQVFTGHFNEKQSTLDACFTPNAEYVLSGSEDRGIYVWRSGDGKLSKVLRG-HSGPVGRVCCSPKFEVIASACSNTALWI 219
            MSP DD F++GS+D+T+RLW+L    C  ++  P   G P  ++D +GL+FAA  +   + +IKLYD R+++KGPF TF ++  K                       WT +KFS+DG+ ILI+T+ ++V  + AF G   Q F GH N K   L+A F+P+ +YVLSGS+D  I+VW S +G  + VL G H GP+  V  +P+F ++AS CSN A W+
Sbjct:  116 MSPVDDSFLSGSLDKTIRLWDLRSQSCQGMMSIP---GRPIASFDPEGLIFAAGIN---SEMIKLYDLRSFDKGPFTTFRLQQDK--------------------DCDWTGLKFSSDGKLILISTNGTVVRLIDAFHGQPLQTFMGHLNTKGLPLEASFSPDGQYVLSGSQDGRIHVWNSENGSKTAVLDGKHPGPLQCVKFNPRFMMLASTCSNMAFWL 309          
BLAST of mRNA_H-paniculata_contig5788.13378.1 vs. uniprot
Match: W7TLY5_9STRA (Wd repeat-containing protein 82 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLY5_9STRA)

HSP 1 Score: 174 bits (440), Expect = 6.930e-49
Identity = 89/232 (38.36%), Postives = 142/232 (61.21%), Query Frame = 0
Query:    1 MSPTDDHFMTGSVDRTVRLWNLSRPECLAILEFPASSGTPHVA------YDQQGLVFAATTSLGATNIIKLYDARNYEKGPFDTFTVENAKVEEFLSQK-PDMKPKRAQVLSQARWTSMKFSADGQSILIATDASLVLTLGAFEGDVKQVFTGHFNEKQSTLDACFTPNAEYVLSGSEDRGIYVWRSGDGK----LSKVLRGHSGPVGRVCCSPKFEVIASACSNTALWIDA 221
            MS TDD F++ S+D TVR+W L +P+CL +       G+ H A      +D  GLVFAA   +   +++KLYDAR + +G F++F +  A++ E L Q+ P + P+ A+ L QA WT M FSADG+++L++T A + L +  ++  + +  TG+ N     + AC+TP+A ++L+GSED  + V+ +G+ +    +   L GH  PV +V C+P +E +AS CS+  LWI A
Sbjct:  163 MSYTDDRFLSASMDGTVRIWTLQQPKCLGLGSIGGDGGSNHNAQPVLAEFDPSGLVFAACAQVHDRHLLKLYDARKFSEGAFESFGISEAELRETLQQQQPTIDPEVARKLVQAPWTDMHFSADGKNLLVSTRAGMTLVIDTYDLQITRFLTGYRNTGGLDITACYTPDAGHILTGSEDGNVCVFDAGEERTMDGIVHRLEGHPRPVQQVRCNPVYEQVASGCSHVVLWISA 394          
BLAST of mRNA_H-paniculata_contig5788.13378.1 vs. uniprot
Match: UPI001C90A089 (WD repeat-containing protein 82-like isoform X1 n=2 Tax=Thoracicalcarea TaxID=2899756 RepID=UPI001C90A089)

HSP 1 Score: 171 bits (433), Expect = 1.180e-48
Identity = 87/220 (39.55%), Postives = 133/220 (60.45%), Query Frame = 0
Query:    1 MSPTDDHFMTGSVDRTVRLWNLSRPECLAILEFPASSGTPHVAYDQQGLVFAATTSLGATNIIKLYDARNYEKGPFDTFTVENAKVEEFLSQKPDMKPKRAQVLSQARWTSMKFSADGQSILIATDASLVLTLGAFEGDVKQVFTGHFNEKQSTLDACFTPNAEYVLSGSEDRGIYVWRSGDG-KLSKVLRGHSGPVGRVCCSPKFEVIASACSNTALWI 219
            MSP DD F++GS+DRT+RLW+L  P C  ++     SG P  A+D +GL+FAA  +   +  +KLYD R+++KGPF TF +   K                    +  WT +KFS DG+++L++T+ S++  + AF G   Q FTGH N K   L+A ++P++++V SGS D  ++VW + +G KL  +   H+GPV  V  +PK+ ++ASACSN A W+
Sbjct:  118 MSPVDDSFLSGSMDRTLRLWDLRSPNCQGLMHL---SGRPVAAFDPEGLIFAAGVN---SESLKLYDLRSFDKGPFTTFKLSQEK--------------------ECDWTGVKFSPDGKTLLVSTNGSIIRLVDAFTGQPLQTFTGHLNNKGIALEASYSPDSQFVFSGSTDGRLHVWNAENGYKLCVLNADHTGPVQCVQFNPKYMMLASACSNMAFWL 311          
BLAST of mRNA_H-paniculata_contig5788.13378.1 vs. uniprot
Match: A0A7S3ETB8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ETB8_9EUKA)

HSP 1 Score: 170 bits (431), Expect = 1.460e-48
Identity = 90/219 (41.10%), Postives = 132/219 (60.27%), Query Frame = 0
Query:    1 MSPTDDHFMTGSVDRTVRLWNLSRPECLAILEFPASSGTPHVAYDQQGLVFAATTSLGATNIIKLYDARNYEKGPFDTFTVENAKVEEFLSQKPDMKPKRAQVLSQARWTSMKFSADGQSILIATDASLVLTLGAFEGDVKQVFTGHFNEKQSTLDACFTPNAEYVLSGSEDRGIYVWRSGDGKLSKVLRGHSGPVGRVCCSPKFEVIASACSNTALWI 219
            MSP +D F + S+D T+R+W+L   +C A++ F +    P VA+D +G+V AA    G T   KL+D R YEKGPF TF+             PD        LS   ++ +KFS DG+ +L AT    VL L AF+GD+ Q F+GH N+++ +L+ACF+ +AEY+L+G+ED  I+ W +  G+    L+GH GPVG + C+P   ++ASACS   LW+
Sbjct:  108 MSPKEDIFASASLDDTIRIWDLRSTDCQAVMHFASGGERPAVAFDDKGVVLAAAIC-GQT---KLFDVRAYEKGPFSTFS-------------PD--------LSARSFSCVKFSNDGKFVLQATTGGSVLLLDAFKGDLMQRFSGHDNQREMSLEACFSADAEYILAGAEDGSIWRWHTRTGQALPPLKGHQGPVGAIKCNPTRMMMASACSVVCLWL 301          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5788.13378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS13_ECTSI2.370e-12578.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z8J7_9STRA8.780e-9663.18WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2V378_9STRA1.590e-8659.55Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A3M6U4U0_POCDA1.410e-5040.00Uncharacterized protein n=5 Tax=Scleractinia TaxID... [more]
UPI00193A69272.160e-5041.82WD repeat-containing protein 82-like n=1 Tax=Styel... [more]
Q54XN8_DICDI1.380e-4940.18ANAPC4_WD40 domain-containing protein n=1 Tax=Dict... [more]
A0A6F9DX34_9ASCI2.410e-4940.91WD repeat-containing protein 82-like n=4 Tax=Phleb... [more]
W7TLY5_9STRA6.930e-4938.36Wd repeat-containing protein 82 n=2 Tax=Monodopsid... [more]
UPI001C90A0891.180e-4839.55WD repeat-containing protein 82-like isoform X1 n=... [more]
A0A7S3ETB8_9EUKA1.460e-4841.10Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 182..220
e-value: 0.27
score: 20.3
coord: 137..179
e-value: 0.0057
score: 25.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 2..21
e-value: 0.019
score: 15.8
coord: 141..178
e-value: 9.4E-4
score: 20.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..30
score: 11.544
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 159..188
score: 9.138
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..85
e-value: 4.7E-9
score: 37.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 86..219
e-value: 6.8E-19
score: 69.8
NoneNo IPR availablePANTHERPTHR19861WD40 REPEAT PROTEIN SWD2coord: 1..219
IPR037867COMPASS component Swd2/WDR82PANTHERPTHR19861:SF0WD REPEAT-CONTAINING PROTEIN 82coord: 1..219
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 147..227
score: 9.968
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..30
score: 10.97
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5788contigH-paniculata_contig5788:2296..5437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5788.13378.1mRNA_H-paniculata_contig5788.13378.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5788 1439..6474 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5788.13378.1 ID=prot_H-paniculata_contig5788.13378.1|Name=mRNA_H-paniculata_contig5788.13378.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
MSPTDDHFMTGSVDRTVRLWNLSRPECLAILEFPASSGTPHVAYDQQGLV
FAATTSLGATNIIKLYDARNYEKGPFDTFTVENAKVEEFLSQKPDMKPKR
AQVLSQARWTSMKFSADGQSILIATDASLVLTLGAFEGDVKQVFTGHFNE
KQSTLDACFTPNAEYVLSGSEDRGIYVWRSGDGKLSKVLRGHSGPVGRVC
CSPKFEVIASACSNTALWIDAGLDSTQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037867Swd2/WDR82
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf