prot_H-paniculata_contig57872.13377.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig57872.13377.1
Unique Nameprot_H-paniculata_contig57872.13377.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
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BLAST of mRNA_H-paniculata_contig57872.13377.1 vs. uniprot
Match: D8LFS0_ECTSI (Defective in cullin neddylation protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFS0_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 4.900e-16
Identity = 36/49 (73.47%), Postives = 45/49 (91.84%), Query Frame = 0 
Query:    5 LGYDNVKDLVVLVISWKMQAQEMCVYTRKEWREGMAKLGVSTTRQLRQK 53
            LG D  +DLVVL+ISWKM+A+EMCVY+R+EWR GM+K+GVS+TRQLRQK
Sbjct:  107 LGVDT-QDLVVLIISWKMEAEEMCVYSRQEWRRGMSKMGVSSTRQLRQK 154
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig57872.13377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFS0_ECTSI4.900e-1673.47Defective in cullin neddylation protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 3..53
e-value: 2.0E-13
score: 52.1
IPR005176Potentiating neddylation domainPROSITEPS51229DCUN1coord: 1..53
score: 10.938

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig57872contigH-paniculata_contig57872:229..387 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig57872.13377.1mRNA_H-paniculata_contig57872.13377.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig57872 229..387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig57872.13377.1 ID=prot_H-paniculata_contig57872.13377.1|Name=mRNA_H-paniculata_contig57872.13377.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
LFFCLGYDNVKDLVVLVISWKMQAQEMCVYTRKEWREGMAKLGVSTTRQL
RQK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005176PONY_dom