prot_H-paniculata_contig5780.13371.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig5780.13371.1
Unique Name	prot_H-paniculata_contig5780.13371.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	101

Homology

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BLAST of mRNA_H-paniculata_contig5780.13371.1 vs. uniprot
Match: A0A6H5JPU1_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU1_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 4.410e-34
Identity = 62/100 (62.00%), Postives = 77/100 (77.00%), Query Frame = 0

Query:    2 LVLDGHAFHVTFDVIKLAISLNIELFQLPSHSPHITQPLDVATFGVFKTEITSVLQPFPRRIGGKMPMKSDMVEVIRDAFQSSFTRSQVKLSFEGADLWP 101
            LVLDGHA H TFD I LAISL+I+LFQLPSH+ HITQPLDV TFG FK E+T VL  +P +IGG+ P+KSDM  VI +A++ SFT +    +F+GA +WP
Sbjct:   33 LVLDGHASHTTFDAITLAISLDIDLFQLPSHTSHITQPLDVGTFGTFKEELTRVLTAYPLKIGGRSPVKSDMAGVIAEAWRGSFTPANNMAAFKGAGMWP 132

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BLAST of mRNA_H-paniculata_contig5780.13371.1 vs. uniprot
Match: A0A6H5L3C6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C6_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 1.070e-33
Identity = 61/100 (61.00%), Postives = 76/100 (76.00%), Query Frame = 0

Query:    2 LVLDGHAFHVTFDVIKLAISLNIELFQLPSHSPHITQPLDVATFGVFKTEITSVLQPFPRRIGGKMPMKSDMVEVIRDAFQSSFTRSQVKLSFEGADLWP 101
            LVLDGHA H TFD I LAISL+I+LFQLPSH+ HITQPLDV TFG FK E+T VL  +P +IGG+ P+K DM  VI +A++  FT +   ++F+GA LWP
Sbjct:   52 LVLDGHASHTTFDAINLAISLDIDLFQLPSHTWHITQPLDVGTFGTFKKELTRVLTAYPPKIGGRSPVKRDMAGVIAEAWRGRFTPASNMVAFKGAGLWP 151

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BLAST of mRNA_H-paniculata_contig5780.13371.1 vs. uniprot
Match: A0A6H5JT16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT16_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.500e-33
Identity = 61/101 (60.40%), Postives = 75/101 (74.26%), Query Frame = 0

Query:    1 VLVLDGHAFHVTFDVIKLAISLNIELFQLPSHSPHITQPLDVATFGVFKTEITSVLQPFPRRIGGKMPMKSDMVEVIRDAFQSSFTRSQVKLSFEGADLWP 101
            VLVLDGHA HVT++V+KLA  LNI L+Q+PSHS H+ QPLDV +FG FK EIT VL  FP R GG++P KSDM+ ++ DA+  SF+  Q   SF GA LWP
Sbjct:   95 VLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVVSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEEQNISSFAGAGLWP 195

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BLAST of mRNA_H-paniculata_contig5780.13371.1 vs. uniprot
Match: A0A6H5K717_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K717_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 4.100e-33
Identity = 60/101 (59.41%), Postives = 74/101 (73.27%), Query Frame = 0

Query:    1 VLVLDGHAFHVTFDVIKLAISLNIELFQLPSHSPHITQPLDVATFGVFKTEITSVLQPFPRRIGGKMPMKSDMVEVIRDAFQSSFTRSQVKLSFEGADLWP 101
            VL LDGHA HVT++V+KLA  LNI L+Q+PSHS H+ QPLDV +FG FK EIT VL  FP R GG++P KSDM+ ++ DA+  SF+  Q   SF GA LWP
Sbjct:   99 VLALDGHASHVTYEVVKLARELNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEEQNISSFVGAGLWP 199

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BLAST of mRNA_H-paniculata_contig5780.13371.1 vs. uniprot
Match: A0A6H5J798_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J798_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 4.820e-33
Identity = 61/100 (61.00%), Postives = 76/100 (76.00%), Query Frame = 0

Query:    2 LVLDGHAFHVTFDVIKLAISLNIELFQLPSHSPHITQPLDVATFGVFKTEITSVLQPFPRRIGGKMPMKSDMVEVIRDAFQSSFTRSQVKLSFEGADLWP 101
            LVLDGHA H TFD I LAISL+I+LFQLPSH+ HITQPL+V TFG FK E+T VL  +P +IGG+ P+K DM  VI +A++ SFT +    +F+GA LWP
Sbjct:  164 LVLDGHASHTTFDAISLAISLDIDLFQLPSHTSHITQPLEVGTFGTFKKELTRVLTAYPLKIGGRSPVKRDMAGVIAEAWRRSFTPANNMAAFKGAGLWP 263

[Close]

BLAST of mRNA_H-paniculata_contig5780.13371.1 vs. uniprot
Match: A0A6H5KSS7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSS7_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 9.060e-33
Identity = 61/100 (61.00%), Postives = 75/100 (75.00%), Query Frame = 0

Query:    2 LVLDGHAFHVTFDVIKLAISLNIELFQLPSHSPHITQPLDVATFGVFKTEITSVLQPFPRRIGGKMPMKSDMVEVIRDAFQSSFTRSQVKLSFEGADLWP 101
            LVLDGHA H TFD I LAISL+I+LFQLPSH+ HITQPLDV  FG FK E+T VL  +P +IGG+ P+K DM  VI +A++ SFT +    +F+GA LWP
Sbjct:   52 LVLDGHASHTTFDAISLAISLDIDLFQLPSHTSHITQPLDVGIFGTFKKELTRVLTAYPLKIGGRSPVKRDMAGVIAEAWRGSFTPANNMAAFKGAGLWP 151

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BLAST of mRNA_H-paniculata_contig5780.13371.1 vs. uniprot
Match: A0A6H5L259_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L259_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 1.390e-32
Identity = 61/100 (61.00%), Postives = 75/100 (75.00%), Query Frame = 0

Query:    2 LVLDGHAFHVTFDVIKLAISLNIELFQLPSHSPHITQPLDVATFGVFKTEITSVLQPFPRRIGGKMPMKSDMVEVIRDAFQSSFTRSQVKLSFEGADLWP 101
            LVLDGHA H TFD I LAISL+I+LFQLPSH+ HITQPLDV TFG FK E+T VL  +P +IGG+ P+K DM  VI +A + SFT +    +F+G+ LWP
Sbjct:  167 LVLDGHASHTTFDAISLAISLDIDLFQLPSHTSHITQPLDVGTFGTFKKELTRVLTAYPLKIGGRSPVKRDMAGVIAEACRGSFTPANNMAAFKGSGLWP 266

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BLAST of mRNA_H-paniculata_contig5780.13371.1 vs. uniprot
Match: A0A6H5KP55_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP55_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 2.910e-32
Identity = 65/101 (64.36%), Postives = 72/101 (71.29%), Query Frame = 0

Query:    1 VLVLDGHAFHVTFDVIKLAISLNIELFQLPSHSPHITQPLDVATFGVFKTEITSVLQPFPRRIGGKMPMKSDMVEVIRDAFQSSFTRSQVKLSFEGADLWP 101
            VLVLDGHA HV+ DVIKLAISLNI L QLPSH  HITQPLDVA FG FK E+  V+Q FP R GG +P K DM  +I  A+  SFT    K+SF GA LWP
Sbjct:  144 VLVLDGHASHVSLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGPSFTPEINKVSFAGAGLWP 244

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BLAST of mRNA_H-paniculata_contig5780.13371.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 7.990e-32
Identity = 67/101 (66.34%), Postives = 72/101 (71.29%), Query Frame = 0

Query:    1 VLVLDGHAFHVTFDVIKLAISLNIELFQLPSHSPHITQPLDVATFGVFKTEITSVLQPFPRRIGGKMPMKSDMVEVIRDAFQSSFTRSQVKLSFEGADLWP 101
            VLVLDGHA HVT DVIKLAISLNI L QLPSH  HITQPLDVA FG FK E+  V+Q FP R GG +P K DM  +I  A+ SSFT    K SF GA LWP
Sbjct:  293 VLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGSSFTPEINKASFAGAGLWP 393

[Close]

BLAST of mRNA_H-paniculata_contig5780.13371.1 vs. uniprot
Match: A0A6H5JYT8_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT8_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 9.120e-32
Identity = 58/101 (57.43%), Postives = 73/101 (72.28%), Query Frame = 0

Query:    1 VLVLDGHAFHVTFDVIKLAISLNIELFQLPSHSPHITQPLDVATFGVFKTEITSVLQPFPRRIGGKMPMKSDMVEVIRDAFQSSFTRSQVKLSFEGADLWP 101
            VLVLDGH  H TFD I LAIS +I+LFQLPSH+ HITQPL V TFG FK E+T VL  +P +IGG+ P+K DM  V+ + ++ SFT +    +F+GA LWP
Sbjct:   51 VLVLDGHPSHSTFDAISLAISPDIDLFQLPSHTSHITQPLGVGTFGTFKKELTRVLAAYPLKIGGRSPVKRDMAGVLAEVWRGSFTPANNMAAFKGAGLWP 151

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5780.13371.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5780.13371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JPU1_9PHAE	4.410e-34	62.00	DDE-1 domain-containing protein (Fragment) n=1 Tax...	[more]
A0A6H5L3C6_9PHAE	1.070e-33	61.00	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JT16_9PHAE	1.500e-33	60.40	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K717_9PHAE	4.100e-33	59.41	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5J798_9PHAE	4.820e-33	61.00	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KSS7_9PHAE	9.060e-33	61.00	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5L259_9PHAE	1.390e-32	61.00	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KP55_9PHAE	2.910e-32	64.36	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JYX7_9PHAE	7.990e-32	66.34	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JYT8_9PHAE	9.120e-32	57.43	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004875	DDE superfamily endonuclease domain	PFAM	PF03184	DDE_1	coord: 1..52 e-value: 8.9E-6 score: 25.5
None	No IPR available	PANTHER	PTHR19303	TRANSPOSON	coord: 2..101
None	No IPR available	PANTHER	PTHR19303:SF40		coord: 2..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5780	contig	H-paniculata_contig5780:494..796 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5780.13371.1	mRNA_H-paniculata_contig5780.13371.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig5780 494..796 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig5780.13371.1 ID=prot_H-paniculata_contig5780.13371.1|Name=mRNA_H-paniculata_contig5780.13371.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=101bp
VLVLDGHAFHVTFDVIKLAISLNIELFQLPSHSPHITQPLDVATFGVFKT
EITSVLQPFPRRIGGKMPMKSDMVEVIRDAFQSSFTRSQVKLSFEGADLW
P

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004875	DDE_SF_endonuclease_dom