mRNA_H-paniculata_contig5778.13368.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5778.13368.1
Unique NamemRNA_H-paniculata_contig5778.13368.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig5778.13368.1 vs. uniprot
Match: A0A6A4YXA2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YXA2_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.760e-8
Identity = 40/125 (32.00%), Postives = 65/125 (52.00%), Query Frame = 3 
Query:  840 GSKLLHTAACLGHLEFAEALVEQ-GVSVDAVNDNKESPLLMAIAKGHTDMTKLLRRLGARAD--LVSHTGMSALHMAVVHSTPTIAAMVLKEYGISTCMRDSNGRTALDMAASKGRADMIRILLE 1205
            G   LH A   GH      L+ Q G  ++A ++N+ +PL++A  KG  ++ +LL       D  L  + G SALH A +    ++   +L + G     +D N  T L +AA KGR +++++LLE
Sbjct:    2 GRSALHQACMEGHESVVTFLLAQSGCDINAKDENRNTPLMLAAWKGRLEIVQLLFERPDIHDINLGGNGGRSALHQACMEGHESVVTFLLAQSGCDINAKDRNRNTPLMLAARKGRLEIVQLLLE 126
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BLAST of mRNA_H-paniculata_contig5778.13368.1 vs. uniprot
Match: A0A355KRT0_9BACT (Uncharacterized protein n=1 Tax=Candidatus Dependentiae bacterium TaxID=2030827 RepID=A0A355KRT0_9BACT)

HSP 1 Score: 67.4 bits (163), Expect = 5.730e-8
Identity = 43/137 (31.39%), Postives = 71/137 (51.82%), Query Frame = 3 
Query:  690 LVDAGADVMVPNMSGQTPIEFWLHRGEHETALVILKS--ICKTVKPDRFKQHGSKLLHTAACLG-HLEFAEALVEQGVSVDAVNDNKESPLLMAIAKGHTDMTKLLRRLGARADLVSHTGMSALHMAVVHSTPTIAA 1091
            LV  GAD+   +    +P+      G  + A  ++K+      + PD     GS LLH AA    +++  + L+EQGV++D VN+N E+PLL+A  +GH D+ + L   GA   + +  G +A  +AV    P + +
Sbjct:  159 LVSKGADIQKISDDNDSPLSCAFQSGYLDAARCLIKAGASINVIAPD-----GSNLLHRAAYDNWNVKSVKYLIEQGVAIDKVNNNNETPLLLAAQRGHLDVVRCLVEAGASFSIKNTAGQTARDLAVQGIHPLVVS 290
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BLAST of mRNA_H-paniculata_contig5778.13368.1 vs. uniprot
Match: A0A7J7JKJ4_BUGNE (ANKRD16 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JKJ4_BUGNE)

HSP 1 Score: 67.4 bits (163), Expect = 6.360e-8
Identity = 39/122 (31.97%), Postives = 59/122 (48.36%), Query Frame = 3 
Query:  837 HGSKLLHTAACLGHLEFAEALVEQGVSVDAVNDNKESPLLMAIAKGHTDMTKLLRRLGARADLVSHTGMSALHMAVVHSTPTIAAMVLKEYGISTCMRDSNGRTALDMAASKGRADMIRILL 1202
            +G   LH AA  GH    +  ++ GV+ D +     +PL+MA AKGH  + K+L   GA    V+  G +  H+A       I + +L E          NGRT L  AA  GR + ++++L
Sbjct:   70 NGKTALHEAASAGHALVVDFFLKHGVNADCLKAADWTPLMMACAKGHIGVMKILVSNGASITRVNKDGWNTFHIATRDQDIQIVSFLLDEAPSCWDTSSKNGRTPLHTAAIHGRVECLKLML 191
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BLAST of mRNA_H-paniculata_contig5778.13368.1 vs. uniprot
Match: A0A7N2KVD4_QUELO (Uncharacterized protein n=3 Tax=Fagaceae TaxID=3503 RepID=A0A7N2KVD4_QUELO)

HSP 1 Score: 67.0 bits (162), Expect = 1.860e-7
Identity = 39/125 (31.20%), Postives = 70/125 (56.00%), Query Frame = 3 
Query:  690 LVDAGADVMVPNMSGQTPIEFWLHRGEHETALVILKSICKTVKPDRFKQHGS-KLLHTAACLGHLEFAEALVEQGVSVDAVNDNKESPLLMAIAKGHTDMTKLLRRLGARADLVSHTGMSALHMA 1061
            L++AGAD+ V +  GQT      H       +   + +   V  ++ K +   + +H AA +G+L     L++ G SV+++++N  SPL++A  +GH D  KLL + GA   +V+ +G +AL++A
Sbjct:  501 LLNAGADISVKSREGQTIGSLLQHHPFDGARIRFEEILLDAVLANKLKGYSEFRAIHFAAQIGNLPAVVELLKMGFSVNSLDENGHSPLMVAAKEGHADACKLLLQRGADCGIVNSSGETALYLA 625
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BLAST of mRNA_H-paniculata_contig5778.13368.1 vs. uniprot
Match: A0A093VQ33_TALMA (Putative ankyrin repeat protein n=1 Tax=Talaromyces marneffei PM1 TaxID=1077442 RepID=A0A093VQ33_TALMA)

HSP 1 Score: 67.0 bits (162), Expect = 2.160e-7
Identity = 58/192 (30.21%), Postives = 94/192 (48.96%), Query Frame = 3 
Query:  678 IVARLVDAGADVMVPNMSGQTPIEFWLHRGEHETALVIL-KSICKTVKPDRFKQHGSKLLHTAACLG--HLEFAEALVEQGVSVDAVNDNKESPLLMAIAKG--HTDMT--------KLLRRLGARADLVSHTGM--SALHMAVVHSTPTIA-AMVLKEYGISTCMRDSNGRTALDMAASKGRADMIRILLE 1205
            I+++L+D GA++   N  G TP++     G  E   ++L +     V+  R    G  LLH        +LE  +AL+E+G+SVDA++     P+  A  +G    D+T        KLL   GA  + V+      + LH+A   S P  +  ++L   G     +   G+TAL +AA++GR  + RILL+
Sbjct:  762 IISKLIDQGANIEARNSKGYTPLQAASLNGNKEMFFLLLDRGANIAVETPR----GESLLHITPPNNQDYLEIYQALLERGLSVDALSSEGWKPIHQAAFRGTGSPDVTLDKSCEHLKLLVSHGADINSVTQAAEQETPLHLATRASIPRPSYILLLLSLGADVNAKSGEGKTALHLAAARGRESVFRILLD 949
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BLAST of mRNA_H-paniculata_contig5778.13368.1 vs. uniprot
Match: UPI0010A09556 (ankyrin repeat domain-containing protein 7-like n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=UPI0010A09556)

HSP 1 Score: 62.8 bits (151), Expect = 2.960e-7
Identity = 42/143 (29.37%), Postives = 67/143 (46.85%), Query Frame = 3 
Query:  807 KTVKPDRFKQHGSKLLHTAACLGHLEFAEALVEQGVSVDAVNDNKESPLLMAIAKGHTDMTKLLRRLGARADLVSHTGMSALHMAVVHSTPTIAAMVLKEYGISTCMRDSNGRTALDMAASKGRADMIRILLEGGAPVEHQGK 1235
            K    ++  +    LLH A   GH +    LVE    +D ++D  ++PL+MA+     +   +L + GA   L    G +ALH A + S   +A  +L +Y  +    +  G T L +A  K   +M   LLE GA V  +G+
Sbjct:   36 KKANVNKADKENRTLLHVACAGGHSDVVSFLVENQAELDPIDDEHQTPLIMAVQHMREECVLILLKNGANPWLKDINGDTALHHAALVSELPLARHLL-DYNAAVDTPNKTGCTPLMVAVDKNDQEMATFLLECGADVNAKGR 177
[Close]
BLAST of mRNA_H-paniculata_contig5778.13368.1 vs. uniprot
Match: A0A6A4XP23_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XP23_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 5.480e-7
Identity = 65/270 (24.07%), Postives = 112/270 (41.48%), Query Frame = 3 
Query:  690 LVDAGADVMVPNMSGQTPIEFWLHRGEHETALVILKSICKTVKPDRFKQH-----GSKLLHTAACLGHLEFAEALVEQ-GVSVDAVNDNKESPLLMAIAKGHTDMTKLLRRLGARAD--LVSHTGMSALHMAVVHSTPTIAAMVLKEYGISTCMRDSNGRTALDMAASKGRADMIRILLEGGAPVEHQ----GKGLXXXXXXXXXXXXXXXXXXXVAKATAGHCWNDMGRKTPLFLASCRGYVSVVKILTPELTKRQIDMQDTVTMHTAL 1463
            L  +G D+   +    TP+     +G  E   ++L+      +PD    +     G   LH +   GH      L+ Q G  ++A ++N+ +PL++A  KG  ++ +LL       D  L  + G SALH + +    ++   +L + G      D    T L +AA KGR +++++LLE   P  H     G                      +A++       D  R TPL LA+ +G + +V++L        I++   V   T L
Sbjct:   91 LAQSGCDINAKDGELSTPLMLAAWKGRLEIVQLLLE------RPDLHNINLGDNLGRSALHESCMEGHESVVTFLLAQSGCDINAKDENRNTPLMLAAWKGRLEIVQLLLERPDIHDINLGGNLGRSALHESCMEGHESVVTFLLAQSGCDINANDGELSTPLMLAAWKGRLEIVQLLLE--RPDLHDINLGGNLGRSALHLACKEGHESVVTFLLAQSGCDINAKDENRNTPLMLAAWKGRLEIVQLLLERPDLHDINLGGNVWFFTGL 352
[Close]
BLAST of mRNA_H-paniculata_contig5778.13368.1 vs. uniprot
Match: UPI00180DEA97 (Ankyrin repeat domain-containing protein n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI00180DEA97)

HSP 1 Score: 62.4 bits (150), Expect = 6.430e-7
Identity = 45/180 (25.00%), Postives = 79/180 (43.89%), Query Frame = 3 
Query:  852 LHTAACLGHLEFAEALVEQGVSVDAVNDNKESPLLMAIAKGHTDMTKLLRRLGARADLVSHTGMSALHMAVVHSTPTIAAMVLKEYGISTCMRDSNGRTALDMAASKGRADMIRILLEGGAPVEHQGK----GLXXXXXXXXXXXXXXXXXXXVAKATAGHCWNDMGRKTPLFLASCRGY 1379
            LH AA  G +    A + +G ++DA + N  +PL +A+ + H +  ++L + GA    +       + +A V +  ++  + L+  G +  +      TAL  AA  G A+++R+L+  GAP++H        L                   +  A A     D   +TPL LA  RG+
Sbjct:   39 LHAAAAAGDVPALTAELARGAAIDARDQNGRTPLHVAVFRTHAEAARVLAKAGADVRALDRQSYDIVTIAAVANDVSMLRLALELGGDAKLVTSPYRGTALIAAAHLGHAEVVRLLIAAGAPLDHVNNLGWTALIESIVLGDGGPNHLACLTALLNAGATPNLADRDGRTPLALAKARGF 218
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BLAST of mRNA_H-paniculata_contig5778.13368.1 vs. uniprot
Match: A0A8C4RLC2_ERPCA (Uncharacterized protein n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=A0A8C4RLC2_ERPCA)

HSP 1 Score: 62.0 bits (149), Expect = 6.650e-7
Identity = 41/129 (31.78%), Postives = 63/129 (48.84%), Query Frame = 3 
Query:  849 LLHTAACLGHLEFAEALVEQGVSVDAVNDNKESPLLMAIAKGHTDMTKLLRRLGARADLVSHTGMSALHMAVVHSTPTIAAMVLKEYGISTCMRDSNGRTALDMAASKGRADMIRILLEGGAPVEHQGK 1235
            LLH A   GH +    LVE    +D ++D  ++PL+MA+     +   +L + GA   L    G +ALH A + S   +A  +L +Y  +    +  G T L +A  K   +M   LLE GA V  +G+
Sbjct:    7 LLHVACAGGHSDVVSFLVENQAELDPIDDEHQTPLIMAVQHMREECVLILLKNGANPWLKDINGDTALHHAALVSELPLARHLL-DYNAAVDTPNKTGCTPLMVAVDKNDQEMATFLLECGADVNAKGR 134
[Close]
BLAST of mRNA_H-paniculata_contig5778.13368.1 vs. uniprot
Match: A0A0F4Z5J5_TALEM (NACHT and Ankyrin domain protein n=1 Tax=Rasamsonia emersonii CBS 393.64 TaxID=1408163 RepID=A0A0F4Z5J5_TALEM)

HSP 1 Score: 65.5 bits (158), Expect = 6.770e-7
Identity = 56/195 (28.72%), Postives = 87/195 (44.62%), Query Frame = 3 
Query:  678 IVARLVDAGADVMVPNMSGQTPIEFWLHRGEHETALVILKSICKTVKPDRFKQHGSKLLHTAACL--GHLEFAEALVEQGVSVDAVNDNKESPLLMAIAKGHTDMTKLLRRLGARADLV------------SHTGMSALHMAVVH--STPTIAAMVLKEYGISTCMRDSNGRTALDMAASKGRADMIRILLEGGA 1214
            + A+L+D GA++      G T ++     G        L    +    +     G  LLH    +  G LE  + L+E+G+ V   +    +PL     KG       L + G   DL+            S TG +ALH+A     S P++ +++L   G S  M+  +G+TAL +AA +GR  + RILLE GA
Sbjct:  941 VAAKLLDHGANIEARTSRGYTALQCAAMAGNKAMFFFFLS---RGANVEVETPSGETLLHITPPIDDGCLEILKTLLEKGLDVKRTSSQGWTPLHQTCFKGTGSPDIALDKTGEYIDLLLSHGADINAVSDSATGETALHLATTAAISRPSLVSLLLAR-GASVNMKTRDGKTALHLAAERGRESIFRILLESGA 1131
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5778.13368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A4YXA2_9STRA1.760e-832.00Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A355KRT0_9BACT5.730e-831.39Uncharacterized protein n=1 Tax=Candidatus Depende... [more]
A0A7J7JKJ4_BUGNE6.360e-831.97ANKRD16 n=1 Tax=Bugula neritina TaxID=10212 RepID=... [more]
A0A7N2KVD4_QUELO1.860e-731.20Uncharacterized protein n=3 Tax=Fagaceae TaxID=350... [more]
A0A093VQ33_TALMA2.160e-730.21Putative ankyrin repeat protein n=1 Tax=Talaromyce... [more]
UPI0010A095562.960e-729.37ankyrin repeat domain-containing protein 7-like n=... [more]
A0A6A4XP23_9STRA5.480e-724.07Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
UPI00180DEA976.430e-725.00Ankyrin repeat domain-containing protein n=1 Tax=R... [more]
A0A8C4RLC2_ERPCA6.650e-731.78Uncharacterized protein n=1 Tax=Erpetoichthys cala... [more]
A0A0F4Z5J5_TALEM6.770e-728.72NACHT and Ankyrin domain protein n=1 Tax=Rasamsoni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5778contigH-paniculata_contig5778:3739..10069 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score100.9
Seed ortholog evalue2.4e-18
Seed eggNOG ortholog2880.D7FVJ8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-15_003570.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size3377
Cds size2037
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5778.13368.1prot_H-paniculata_contig5778.13368.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5778 3807..8797 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930626.5618122-UTR-H-paniculata_contig5778:3738..38061622930626.5618122-UTR-H-paniculata_contig5778:3738..3806Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5778 3739..3806 +
1691481378.692973-UTR-H-paniculata_contig5778:3738..38061691481378.692973-UTR-H-paniculata_contig5778:3738..3806Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5778 3739..3806 +
1622930626.687958-UTR-H-paniculata_contig5778:8797..100691622930626.687958-UTR-H-paniculata_contig5778:8797..10069Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5778 8798..10069 +
1691481378.7727454-UTR-H-paniculata_contig5778:8797..100691691481378.7727454-UTR-H-paniculata_contig5778:8797..10069Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5778 8798..10069 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930626.5765991-CDS-H-paniculata_contig5778:3806..40171622930626.5765991-CDS-H-paniculata_contig5778:3806..4017Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 3807..4017 +
1691481378.7048473-CDS-H-paniculata_contig5778:3806..40171691481378.7048473-CDS-H-paniculata_contig5778:3806..4017Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 3807..4017 +
1622930626.5895667-CDS-H-paniculata_contig5778:4420..45331622930626.5895667-CDS-H-paniculata_contig5778:4420..4533Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 4421..4533 +
1691481378.7145019-CDS-H-paniculata_contig5778:4420..45331691481378.7145019-CDS-H-paniculata_contig5778:4420..4533Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 4421..4533 +
1622930626.6009614-CDS-H-paniculata_contig5778:5148..55741622930626.6009614-CDS-H-paniculata_contig5778:5148..5574Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 5149..5574 +
1691481378.7239645-CDS-H-paniculata_contig5778:5148..55741691481378.7239645-CDS-H-paniculata_contig5778:5148..5574Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 5149..5574 +
1622930626.6156971-CDS-H-paniculata_contig5778:6084..62581622930626.6156971-CDS-H-paniculata_contig5778:6084..6258Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 6085..6258 +
1691481378.7314627-CDS-H-paniculata_contig5778:6084..62581691481378.7314627-CDS-H-paniculata_contig5778:6084..6258Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 6085..6258 +
1622930626.6321177-CDS-H-paniculata_contig5778:6744..69581622930626.6321177-CDS-H-paniculata_contig5778:6744..6958Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 6745..6958 +
1691481378.7389567-CDS-H-paniculata_contig5778:6744..69581691481378.7389567-CDS-H-paniculata_contig5778:6744..6958Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 6745..6958 +
1622930626.6437917-CDS-H-paniculata_contig5778:7243..75421622930626.6437917-CDS-H-paniculata_contig5778:7243..7542Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 7244..7542 +
1691481378.7485597-CDS-H-paniculata_contig5778:7243..75421691481378.7485597-CDS-H-paniculata_contig5778:7243..7542Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 7244..7542 +
1622930626.66099-CDS-H-paniculata_contig5778:7767..81411622930626.66099-CDS-H-paniculata_contig5778:7767..8141Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 7768..8141 +
1691481378.7563567-CDS-H-paniculata_contig5778:7767..81411691481378.7563567-CDS-H-paniculata_contig5778:7767..8141Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 7768..8141 +
1622930626.675806-CDS-H-paniculata_contig5778:8571..87971622930626.675806-CDS-H-paniculata_contig5778:8571..8797Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 8572..8797 +
1691481378.7643664-CDS-H-paniculata_contig5778:8571..87971691481378.7643664-CDS-H-paniculata_contig5778:8571..8797Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5778 8572..8797 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5778.13368.1

>prot_H-paniculata_contig5778.13368.1 ID=prot_H-paniculata_contig5778.13368.1|Name=mRNA_H-paniculata_contig5778.13368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=679bp
MFWGKNPRDGRISWWLTRGKHRSRTTDLVDVRSWDRKTCNGKVPWWLAGD
EHRTDWVTSYLAAAARMNHTVIISQLLCAPVDVSILSFHGRPIGHHAAET
GSLDAIKMLVRSGVNPHAKDNCGRNMVHIASQFGQLQMLNYLLNIGVEHG
AVDKSGQTPLHLVGEKQPVKAAKYRSPNLDECSVKVGCERRDSVAGGYSV
TKTIVARLVDAGADVMVPNMSGQTPIEFWLHRGEHETALVILKSICKTVK
PDRFKQHGSKLLHTAACLGHLEFAEALVEQGVSVDAVNDNKESPLLMAIA
KGHTDMTKLLRRLGARADLVSHTGMSALHMAVVHSTPTIAAMVLKEYGIS
TCMRDSNGRTALDMAASKGRADMIRILLEGGAPVEHQGKGLTPLHHAADA
GQAHCVRMLLVAKATAGHCWNDMGRKTPLFLASCRGYVSVVKILTPELTK
RQIDMQDTVTMHTALTVAIAGGHATTVQALLTAGANPKARGINGELPLAL
AALRPSTPKSASIVEALLRAGADPNAYSTRGIPILHTACGAVRGDGSTVE
LLIKAGAGVNAPSPGDDFVTPLHVAARSNNAPAVRILTAINRCKLNIQSS
TLCRATPLGMAVQEGCSDVVQVLLEAGADIGAVPRNVLGQRHVDSLVNLA
MASGHRHVAYLLSQALRSRDKVAEAKKY*
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mRNA from alignment at H-paniculata_contig5778:3739..10069+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5778.13368.1 ID=mRNA_H-paniculata_contig5778.13368.1|Name=mRNA_H-paniculata_contig5778.13368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6331bp|location=Sequence derived from alignment at H-paniculata_contig5778:3739..10069+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTCTTGCTGCCATTTCTCTATCAGCTACAAGAACCACAACACTTCAATT
GACCGGCGCATCATATTTATGTTTTGGGGCAAAAATCCCCGTGATGGAAG
GATATCATGGTGGTTAACTCGAGGCAAACATAGGAGCAGGACGACGGACT
TGGTTGACGTTAGGTCCTGGGACAGAAAAACATGCAATGGAAAGGTACCA
TGGTGGCTTGCTGGAGACGAACATAGAACTGATTGGGTCACCTCCTACCT
CGCAGCTGCAGCTAGAATGAACCACACAGGTGCGTGCGATTCGATCTACA
GTCAGTACAGCTGTGTATGAGTTATAGGTACTTCTGCAAACAGACAGCTG
CTGTCGTATCATGTGCCTACAGGTAGAGCCATGTAGTACATGGCAGTTCG
TAGTGCTGTGTAAGATATGCGGGGTCAACGTATGCGCGTAGTGTGAAACG
TCACGTGGATCATCAAACAGATCTTCCTGAGGCCTAGCATATCTATTGTC
CGTGTTGTAATTGCTAGCATGTTTTACAATGATTGTATTTGCCACATCGC
GTTGTCCTCGTTCGGTGCTCAGCCTCCGCTCAGCAGGGACTATATATTAT
TTACTTACGCGACTCTATTCAACATACCCCTTCCAGCGCTGATGCCCTCG
TTATGTCAATAACTGCGTGTATCTGTTACCAGTGATTATATCACAGCTCC
TATGCGCTCCAGTGGATGTCTCAATTCTCTCCTTCCACGGCAGACCTATT
GGACATCACGCAGCGGAGACCGGGAGCCTGGATGCCATCAAAATGGTAAG
CGCCTGGCAACCCTTACACGACGGGGAGTAGAGTATGGCACATACGTTCA
CGATAGAAGAACTTTCGCCAATGCTTTATTCTTGATTACACTACAAAAAT
GAAGGGTACATTTGTCAAAACCAAGTCATTGTGTATGTGTAAATACTGTC
TCGGGGCTGGCTCCCAAGGCCACACAAAATACCAGGACTTGGACTGACAT
ACCGTTCGACAGCACCACTCGATCAGCCATGGGCATAGGCTACAAGGCAC
AAGAGTTTTGAGCGAGTGCGTGCGTTCCCCAGAACAGTGCCGTGGGCTCG
TTAGATGTGCGCTGCTATTAAACCTGAAACTGGAACACTGTCTCCTTCAA
CGTCGTGGCCTGTATCGAGCCTGAGCCAATTCATGCCTTGATCGCCACCT
ATAGTACAGTCCAAACGATTGCGGAATGACCACCAGGTTCACCTATGCTT
CTCATGCATGGGAACCTCTGTTTCTGTGCCCACCCCCTTCTCCGTACAAT
TCCTTATGGTAAAGGCGACGACCTTACGCATGATCTCCGAACGTCGTTGT
ACCGTGCCTGTCGCCACCGTTCCTCACTTTTCGCCTCAACCGATGCCCAC
GTACTCTTAGCTGGTGAGATCAGGGGTGAACCCCCACGCCAAAGACAACT
GCGGTCGAAACATGGTTCACATAGCCTCGCAGTTCGGCCAGCTTCAAATG
TTGAACTATCTGCTGAATATTGGAGTGGAGCACGGCGCAGTTGACAAATC
GGGTCAAACCCCGCTTCATCTCGTCGGGGAGAAACAGCCTGTGAAAGCTG
CAAAATATCGCAGCCCAAACCTCGACGAGTGCAGCGTCAAAGTTGGGTGT
GAACGCAGAGATAGCGTGGCTGGTGGTTATAGCGTGACGAAAACAATCGT
GGCTCGTCTTGTGGACGCAGGAGCTGACGTCATGGTGCCAAACATGTCAG
GGCAAACACCCATCGAGTTTTGGCTGCATCGTGGGGAGCACGAAACAGCG
CTTGTAATTCTCAAAAGCATCTGCAAGACGGTCAAAGTGAGTTGGTCACG
TGGATACCAGATGCAGCTTGCCCTTCATTGCTGGACGCTGATTTGTACTC
TCCGACTGGGGGAGAGGGGGGGAGTACAAATTAGTGCAAAATAATCTTGA
AAGCGTAGGGTTACTGTTGCAGACTGGCAACATGAGGCACAAGTATTACC
GTCAACACCAGCTAATGGCGGGACTAATCCTCGAGTCGGAAAAAGGCATG
CAAGTGCAGCTCGTGGATGCATGTGCAATAGCAGGGCTGAGCATGAGCGT
ACCGCGAACTTTCACGAGCTATTTTTCTCATGCTGCCAGCATCGCAGTTT
TCCACCATGCAGCAGAGATTCCACTTATTTTAGGATACCGTCACCCATCG
CTCTCTCCTTATGCATGCAGTCGAAAAGCTTACTAGTCAAATTTTGTAGA
TACGTTAAACAGAGAGGAGAGTGATTCGGTATCGAGGAAGGGGAATTCCA
TATACCATGCCGCCTCTCCCGTTCCGTCTGCATTTTCCTCCATCAGCCAG
ACAGGTTCAAACAGCACGGTTCCAAGCTTTTGCACACGGCTGCTTGCTTA
GGTCACCTGGAGTTTGCCGAAGCTTTAGTTGAGCAAGGAGTGTCTGTGGA
CGCTGTAAACGATAACAAGGAATCCCCTCTGCTGATGGCTATTGCCAAGG
GGCACACTGATATGACGAAGGTGGGATACTGCAGACCATGGGATATATAC
GTGGTTGGGGCCCGAGGCAAGCTGTAGTCCCCCTAGAAGATATATCACTA
GGGGAACCTGTTTTGTCCTACCAGTAGTGGCACCTGTCGCTGATTCTGTT
TTCGCTCCGGCTACCATACCTTTTGTGTATATCAGCTATCATGGTGGACT
TATCACAGTCGAATGCTGGTGTACTCTCGAGCCTAAAAGCCCCTGTTGAG
ATGGGTCGATCCAGATACCCCTAACCCACGCCCTCCAATACGCTTCACCA
TTTACAGTGTAGTCTCTTCGACGATTTGAGATCTGCATGTTCCCGGTGCT
AGCAGCTACCACCCGGGAAATGCACCTGGCCCGAAGAGAATCGATTTCGC
CACTCCACCGCCTCGAACGGGCGGCGTTTTCAGCTTTCATTCAAGTCCTT
CACCTTTGTAAAACTTCACGTTGCTTCGTTTTTTCCTTGGATCCCGCATG
GTACAGCTGTTGCGGCGCTTAGGTGCACGCGCCGATCTCGTATCACACAC
AGGCATGTCGGCATTGCATATGGCGGTGGTGCATTCAACGCCTACCATTG
CAGCCATGGTGTTGAAAGAGTATGGCATTTCCACTTGTATGCGGGACAGT
AACGGACGGACTGCGCTAGACATGGCCGCCTCCAAAGGGCGCGCCGACAT
GATCCGAATTCTGCTCGAAGGTGGGTCATGAATCACCCGTAAAATAATGT
TCAGTGCTCGAGTTTAATGTCCCGACTGGGGTGGGGAGCAAAGGCCGCTC
GCAGCCAGAGGACGAAAGGACCCCCTCGCAAGAAATATCTCCTCGTGGAA
CACGTTCAGATTACGAGACAACAAGATCTGAAAGAGCGGGATAATTATTG
ATATTGGCTATTTCAGCAACGATATCGCCTGAGTACAAATAACGTTTGCG
CTCGCACTCGTTGCCCCCCTCTTCGCGGCTCTCGTATTCTTTTGGATCTA
CGTAGGTGGTGCTCCAGTAGAGCATCAAGGCAAAGGGTTGACCCCTTTGC
ACCATGCGGCCGATGCTGGACAAGCACATTGCGTTAGAATGCTGCTGGTA
GCGAAGGCCACTGCTGGCCACTGCTGGAACGACATGGGGCGTAAGACTCC
GCTGTTTCTCGCGTCTTGTCGGGGCTATGTCTCCGTTGTTAAAATATTGA
CGCCAGAACTCACCAAAAGACAGATTGACATGCAAGACACGGTGACTATG
CACACGGCTCTTACTGTGGCCATCGCGGGGGGTCATGCCACAACAGTCCA
AGCGGTGAGAACACGATTTCGCATAGCACTCCTACACTGATTCCACGACG
AGCTGTTGTGTTGGGCGTGGAATGTGGTAGTAACAGTCCACTTGCATTTT
GACTGCGATTTTAGGAATGTACAGGACTGCATGGCGTTCCACTCATTGAG
GTTCAACAATGCAACTCGTCCGCGCTTCTCCCGTTGGTTATTGTTGCTCT
TTCCGAACGTGTGTGTGCCCTTTTCACAGTTACTCACGGCAGGGGCAAAT
CCGAAGGCCCGGGGAATCAACGGCGAGCTTCCGCTAGCGCTGGCAGCCCT
GCGTCCTTCGACACCGAAGTCTGCATCTATCGTTGAAGCGCTGCTGCGAG
CAGGCGCGGACCCAAATGCTTACAGCACCAGAGGTATTCCGATCCTACAC
ACGGCTTGTGGGGCTGTCCGTGGGGATGGATCGACGGTTGAATTGCTCAT
CAAGGCTGGCGCTGGAGTAAATGCTCCGTCCCCCGGAGATGATTTCGTGA
CGCCTCTGCATGTGGCCGCCCGCAGCAACAATGCCCCCGCTGTGCGCATC
CTGACGGCCATAAATCGATGCAAGCTCAACATTCAATCTTCTACCCTTTG
CAGGTTGGCGCCGTGCACGGTAGGCATGTATGCGTGATGCCAGGAACAAA
AGGGGCTTCAGTAGATGAATACTCGGGAGTATGATACATCTCAGTGTCTT
TTTGTTTGTTAGGTTCCGACTGCGTTTGTGGCGACGCTCGTGTCTTGACG
TCGCGGCACTGAAGAGTGGTTGATGGTATGTTTGCTGATCAATCATGTAT
AGCTTGAAGGGCGACTTGCTCTGCCTATACCACGCGTACATTGTGCCCGT
AATCGTGCGATATACATAGCGCTGCGCTAAATGGTTTGAAGGAGTGGGCC
CCTCGTCTAGTTCAATCGCCTATACAGCCCAAAATCGCGGGTGTTGATGT
GATGATGCCATCCATCATTTCCCCTTTGAACGTGTATCGAGCGCTTAACC
AATATAACGGGCCTCCTTTGCTCATGTGCGCAGGGCAACACCGCTGGGCA
TGGCCGTACAGGAAGGTTGTAGCGACGTCGTGCAAGTGCTGCTAGAAGCT
GGAGCCGACATCGGAGCCGTTCCTCGGAACGTCCTTGGGCAGAGACACGT
AGACTCTCTCGTCAATCTAGCCATGGCTAGTGGACACCGCCACGTGGCGT
ATCTGTTGTCCCAGGCACTCAGGTCACGTGATAAGGTAGCTGAGGCAAAG
AAGTACTAGCCAGAGCCGAATGTACCACCGTTCCTGCTCCCGGAGAGATT
GCCCAAAGTGTCATCTCTCAGAATTTAGAACCGCGATGGAGGCATCGAGG
GGCGTCGTACTGAAACCACGCCGTCAAGAGTGCTTTCGTAAATACTGGGC
ATGGTTCTCCAGGGACACGGGATTTGAGTTCGTCGTGGTGATGCTCGATG
GTTTGGCAGGTATTCACTCCAGAAAATGCTATGCTATGAGGAGACATCGC
CTCGGCCTGCTGGCGGATTGTTTCTTTATTGCTGAGGAGGGTGCTCGAAA
ACGTGCATATAGAAATAGACAAGTGGAAATTTCGTGCCCGCATTTCATTG
ATTGGTCGATCAGCCTCTTGGACAGGAGCGATCTGATTGGTGCGAAAATC
AACGGTTGAGAAATAATAATCGCTAACTGTAATTATTTTTTTTGTCGGTG
GGAGGTAGGACAGATCTTTTTTTGGAAGGAGTGGACGTTATCATGCTTGT
AAATACATGAAATAGTCGAGGGCACACACATGATTATTGCACATTATGGC
TATTTTGCACCGTAGATCAGACTGAAAATATAGGATTTGATCACATGTTG
GGCACGAGTCTGTGCAGGCTTCATTCATGGACTCATATCAACCTTGCAAA
CGGGCGTATGATTCTCGATGGAGCACCTGTCTCTTGCGAGCGAGATGCTA
TGGTATGGTGTGTGTGAAGTTTGTAGAGTGTGGAGTGATAAGATAGCCAG
CTGTATAGATAGGGCTCAGGGTAAGGTTTTGTTCACAGTATACTTCACTG
TACGAATGTACTCAACAAACAAGCACACGAGTGCGTACTGGAGAATATCG
TATGGAGTGGTCTGACACGGCGCAACATGATTGTCTTGATTAGGTATCTG
AAGATGCAGGCCAGGTTGGCCGTGACTGTTCTTTCCAACATCGGGAGAGA
GATTTCGCGATAGATAGAGGGAGATGTCTCCTGCTACTGCGTAGGAGGAT
CTGGGCATATGATTACTCTCGTCTTATTTGAGATCATTGCAACATGATGG
TTAGGTATTCATCTGGATAGTCGTGTGGATTGGGTTCTAGCAATGAATGG
TTTCGAGTATACGTAGTGGTTAGTTGGTTTAATGTGATGAAATATTAGTA
GAACAATGAGGATGAACATTTTGAAATAGTTGGTTTAATGTGATGTCAAT
TGAGGCAGGATACCTTGTATTGTGACACAAGGCTGCACGCGGTGAGCACG
GAGTCAACAGCATGATGGCGTTTGAAGTGCC
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Coding sequence (CDS) from alignment at H-paniculata_contig5778:3739..10069+

>mRNA_H-paniculata_contig5778.13368.1 ID=mRNA_H-paniculata_contig5778.13368.1|Name=mRNA_H-paniculata_contig5778.13368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4074bp|location=Sequence derived from alignment at H-paniculata_contig5778:3739..10069+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTTTGGGGCAAAAATCCCCGTGATGGAAGGATATCATGGTGGTTAAC
TCGAGGCAAACATAGGAGCAGGACGACGGACTTGGTTGACGTTAGGTCCT
GGGACAGAAAAACATGCAATGGAAAGGTACCATGGTGGCTTGCTGGAGAC
GAACATAGAACTGATTGGGTCACCTCCTACCTCGCAGCTGCAGCTAGAAT
GAACCACACAGATGTTTTGGGGCAAAAATCCCCGTGATGGAAGGATATCA
TGGTGGTTAACTCGAGGCAAACATAGGAGCAGGACGACGGACTTGGTTGA
CGTTAGGTCCTGGGACAGAAAAACATGCAATGGAAAGGTACCATGGTGGC
TTGCTGGAGACGAACATAGAACTGATTGGGTCACCTCCTACCTCGCAGCT
GCAGCTAGAATGAACCACACAGTGATTATATCACAGCTCCTATGCGCTCC
AGTGGATGTCTCAATTCTCTCCTTCCACGGCAGACCTATTGGACATCACG
CAGCGGAGACCGGGAGCCTGGATGCCATCAAAATGTGATTATATCACAGC
TCCTATGCGCTCCAGTGGATGTCTCAATTCTCTCCTTCCACGGCAGACCT
ATTGGACATCACGCAGCGGAGACCGGGAGCCTGGATGCCATCAAAATGCT
GGTGAGATCAGGGGTGAACCCCCACGCCAAAGACAACTGCGGTCGAAACA
TGGTTCACATAGCCTCGCAGTTCGGCCAGCTTCAAATGTTGAACTATCTG
CTGAATATTGGAGTGGAGCACGGCGCAGTTGACAAATCGGGTCAAACCCC
GCTTCATCTCGTCGGGGAGAAACAGCCTGTGAAAGCTGCAAAATATCGCA
GCCCAAACCTCGACGAGTGCAGCGTCAAAGTTGGGTGTGAACGCAGAGAT
AGCGTGGCTGGTGGTTATAGCGTGACGAAAACAATCGTGGCTCGTCTTGT
GGACGCAGGAGCTGACGTCATGGTGCCAAACATGTCAGGGCAAACACCCA
TCGAGTTTTGGCTGCATCGTGGGGAGCACGAAACAGCGCTTGTAATTCTC
AAAAGCATCTGCAAGACGGTCAAACTGGTGAGATCAGGGGTGAACCCCCA
CGCCAAAGACAACTGCGGTCGAAACATGGTTCACATAGCCTCGCAGTTCG
GCCAGCTTCAAATGTTGAACTATCTGCTGAATATTGGAGTGGAGCACGGC
GCAGTTGACAAATCGGGTCAAACCCCGCTTCATCTCGTCGGGGAGAAACA
GCCTGTGAAAGCTGCAAAATATCGCAGCCCAAACCTCGACGAGTGCAGCG
TCAAAGTTGGGTGTGAACGCAGAGATAGCGTGGCTGGTGGTTATAGCGTG
ACGAAAACAATCGTGGCTCGTCTTGTGGACGCAGGAGCTGACGTCATGGT
GCCAAACATGTCAGGGCAAACACCCATCGAGTTTTGGCTGCATCGTGGGG
AGCACGAAACAGCGCTTGTAATTCTCAAAAGCATCTGCAAGACGGTCAAA
CCAGACAGGTTCAAACAGCACGGTTCCAAGCTTTTGCACACGGCTGCTTG
CTTAGGTCACCTGGAGTTTGCCGAAGCTTTAGTTGAGCAAGGAGTGTCTG
TGGACGCTGTAAACGATAACAAGGAATCCCCTCTGCTGATGGCTATTGCC
AAGGGGCACACTGATATGACGAAGCCAGACAGGTTCAAACAGCACGGTTC
CAAGCTTTTGCACACGGCTGCTTGCTTAGGTCACCTGGAGTTTGCCGAAG
CTTTAGTTGAGCAAGGAGTGTCTGTGGACGCTGTAAACGATAACAAGGAA
TCCCCTCTGCTGATGGCTATTGCCAAGGGGCACACTGATATGACGAAGCT
GTTGCGGCGCTTAGGTGCACGCGCCGATCTCGTATCACACACAGGCATGT
CGGCATTGCATATGGCGGTGGTGCATTCAACGCCTACCATTGCAGCCATG
GTGTTGAAAGAGTATGGCATTTCCACTTGTATGCGGGACAGTAACGGACG
GACTGCGCTAGACATGGCCGCCTCCAAAGGGCGCGCCGACATGATCCGAA
TTCTGCTCGAAGCTGTTGCGGCGCTTAGGTGCACGCGCCGATCTCGTATC
ACACACAGGCATGTCGGCATTGCATATGGCGGTGGTGCATTCAACGCCTA
CCATTGCAGCCATGGTGTTGAAAGAGTATGGCATTTCCACTTGTATGCGG
GACAGTAACGGACGGACTGCGCTAGACATGGCCGCCTCCAAAGGGCGCGC
CGACATGATCCGAATTCTGCTCGAAGGTGGTGCTCCAGTAGAGCATCAAG
GCAAAGGGTTGACCCCTTTGCACCATGCGGCCGATGCTGGACAAGCACAT
TGCGTTAGAATGCTGCTGGTAGCGAAGGCCACTGCTGGCCACTGCTGGAA
CGACATGGGGCGTAAGACTCCGCTGTTTCTCGCGTCTTGTCGGGGCTATG
TCTCCGTTGTTAAAATATTGACGCCAGAACTCACCAAAAGACAGATTGAC
ATGCAAGACACGGTGACTATGCACACGGCTCTTACTGTGGCCATCGCGGG
GGGTCATGCCACAACAGTCCAAGCGGTGGTGCTCCAGTAGAGCATCAAGG
CAAAGGGTTGACCCCTTTGCACCATGCGGCCGATGCTGGACAAGCACATT
GCGTTAGAATGCTGCTGGTAGCGAAGGCCACTGCTGGCCACTGCTGGAAC
GACATGGGGCGTAAGACTCCGCTGTTTCTCGCGTCTTGTCGGGGCTATGT
CTCCGTTGTTAAAATATTGACGCCAGAACTCACCAAAAGACAGATTGACA
TGCAAGACACGGTGACTATGCACACGGCTCTTACTGTGGCCATCGCGGGG
GGTCATGCCACAACAGTCCAAGCGTTACTCACGGCAGGGGCAAATCCGAA
GGCCCGGGGAATCAACGGCGAGCTTCCGCTAGCGCTGGCAGCCCTGCGTC
CTTCGACACCGAAGTCTGCATCTATCGTTGAAGCGCTGCTGCGAGCAGGC
GCGGACCCAAATGCTTACAGCACCAGAGGTATTCCGATCCTACACACGGC
TTGTGGGGCTGTCCGTGGGGATGGATCGACGGTTGAATTGCTCATCAAGG
CTGGCGCTGGAGTAAATGCTCCGTCCCCCGGAGATGATTTCGTGACGCCT
CTGCATGTGGCCGCCCGCAGCAACAATGCCCCCGCTGTGCGCATCCTGAC
GGCCATAAATCGATGCAAGCTCAACATTCAATCTTCTACCCTTTGCAGTT
ACTCACGGCAGGGGCAAATCCGAAGGCCCGGGGAATCAACGGCGAGCTTC
CGCTAGCGCTGGCAGCCCTGCGTCCTTCGACACCGAAGTCTGCATCTATC
GTTGAAGCGCTGCTGCGAGCAGGCGCGGACCCAAATGCTTACAGCACCAG
AGGTATTCCGATCCTACACACGGCTTGTGGGGCTGTCCGTGGGGATGGAT
CGACGGTTGAATTGCTCATCAAGGCTGGCGCTGGAGTAAATGCTCCGTCC
CCCGGAGATGATTTCGTGACGCCTCTGCATGTGGCCGCCCGCAGCAACAA
TGCCCCCGCTGTGCGCATCCTGACGGCCATAAATCGATGCAAGCTCAACA
TTCAATCTTCTACCCTTTGCAGGGCAACACCGCTGGGCATGGCCGTACAG
GAAGGTTGTAGCGACGTCGTGCAAGTGCTGCTAGAAGCTGGAGCCGACAT
CGGAGCCGTTCCTCGGAACGTCCTTGGGCAGAGACACGTAGACTCTCTCG
TCAATCTAGCCATGGCTAGTGGACACCGCCACGTGGCGTATCTGTTGTCC
CAGGCACTCAGGTCACGTGATAAGGTAGCTGAGGCAAAGAAGTACTAGGG
CAACACCGCTGGGCATGGCCGTACAGGAAGGTTGTAGCGACGTCGTGCAA
GTGCTGCTAGAAGCTGGAGCCGACATCGGAGCCGTTCCTCGGAACGTCCT
TGGGCAGAGACACGTAGACTCTCTCGTCAATCTAGCCATGGCTAGTGGAC
ACCGCCACGTGGCGTATCTGTTGTCCCAGGCACTCAGGTCACGTGATAAG
GTAGCTGAGGCAAAGAAGTACTAG
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