prot_H-paniculata_contig5777.13367.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5777.13367.1
Unique Nameprot_H-paniculata_contig5777.13367.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length128
Homology
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BLAST of mRNA_H-paniculata_contig5777.13367.1 vs. uniprot
Match: D7FKA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKA4_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 6.080e-20
Identity = 40/72 (55.56%), Postives = 54/72 (75.00%), Query Frame = 0 
Query:    1 LFQDDLRHPDVQKALQHWTGHQRLPNDEADELMQDNYRVHAVFKKMAALQACCRAGGIGTPLAQVLSGTGLH 72
            L QDDLR+ DV++AL+HWTG  R+  D ADELM+DNYR+ +V  +MA LQ+ C+   IG PL+ VL+G GL+
Sbjct:   38 LLQDDLRNTDVKRALEHWTGQNRMSQDHADELMEDNYRIQSVCSRMAELQSLCKQASIGLPLSHVLAGKGLY 109
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5777.13367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKA4_ECTSI6.080e-2055.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5777contigH-paniculata_contig5777:9617..11275 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5777.13367.1mRNA_H-paniculata_contig5777.13367.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5777 9617..11275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5777.13367.1 ID=prot_H-paniculata_contig5777.13367.1|Name=mRNA_H-paniculata_contig5777.13367.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=128bp
LFQDDLRHPDVQKALQHWTGHQRLPNDEADELMQDNYRVHAVFKKMAALQ
ACCRAGGIGTPLAQVLSGTGLHPANPITAQQQSPTNTSLRHAASLGANHN
TGKAGRDFFQSAESRPNRGQRRTSTGVR
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