mRNA_H-paniculata_contig57744.13361.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig57744.13361.1
Unique NamemRNA_H-paniculata_contig57744.13361.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig57744.13361.1 vs. uniprot
Match: A0A6B7F1L2_9PHAE (ATP-dependent zinc metalloprotease FtsH n=5 Tax=Ectocarpales TaxID=2877 RepID=A0A6B7F1L2_9PHAE)

HSP 1 Score: 568 bits (1463), Expect = 2.490e-198
Identity = 296/308 (96.10%), Postives = 296/308 (96.10%), Query Frame = 1
Query:    1 MKNQTLRNFIIVLVGVALISGFVYLKWDNFTDLGTNLINFKNSHPISIVSYDTFLRYLENGGIKKVDLYENAEIAVFNTFDSLDLNLIKSDTSFAFLNNFLSSDGLQHVGVKIPVRNSSLILTLREYKIDFTAYPIVSFDSVWPILSVLLIPVLLIVVYRLFFSEGSNYDFFGNLRKARAKIQLDADTGVLFSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRVTGVGWT 924
            MKNQTLRNFIIVLVGVALISGFVYLKWDNFTDL TNLINFKNSHP  IVSYDTFLRYLENG IKKVDLYENAEIAVFN FDSLD NLIKSDT  A LNNFLSSD LQHVGVKIPVRNSSLILTLREYKIDFTAYPIVSFDSVWPILSVLLIPVLLIVVYRLFFSEGSNYDFFGNLRKARAKIQLDADTGVLFSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQR TGVG T
Sbjct:    1 MKNQTLRNFIIVLVGVALISGFVYLKWDNFTDLATNLINFKNSHPTKIVSYDTFLRYLENGDIKKVDLYENAEIAVFNAFDSLDKNLIKSDTGIAVLNNFLSSDDLQHVGVKIPVRNSSLILTLREYKIDFTAYPIVSFDSVWPILSVLLIPVLLIVVYRLFFSEGSNYDFFGNLRKARAKIQLDADTGVLFSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRGTGVGGT 308          
BLAST of mRNA_H-paniculata_contig57744.13361.1 vs. uniprot
Match: FTSH_ECTSI (ATP-dependent zinc metalloprotease FtsH n=3 Tax=Ectocarpales TaxID=2877 RepID=FTSH_ECTSI)

HSP 1 Score: 519 bits (1337), Expect = 2.620e-179
Identity = 271/314 (86.31%), Postives = 286/314 (91.08%), Query Frame = 1
Query:    1 MKNQTLRNFIIVLVGVALISGFVYLKWDNFTDLGTNLINFKNSHPISIVSYDTFLRYLENGGIKKVDLYENAEIAVFNTFDSLDLNLIK------SDTSFAFLNNFLSSDGLQHVGVKIPVRNSSLILTLREYKIDFTAYPIVSFDSVWPILSVLLIPVLLIVVYRLFFSEGSNYDFFGNLRKARAKIQLDADTGVLFSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRVTGVGWT 924
            MKNQT +N I+V VG+AL+SGFVYLKWDNFTD+GTNLIN KNSHP  +VSYDTFL YLENG IKKVDLYENAE+AVF+ F+SLD NL+K      SDT F  LN    SD  + +GVKIPVRNSSLILTLR+YKIDFTAYPIV+FDS+WPILSVLLIPVLLIVVYRLFFSEGSNYDFFGNLRKARAKIQLDADTGVLFSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQR TGVG T
Sbjct:    1 MKNQTTKNIILVFVGLALLSGFVYLKWDNFTDVGTNLINLKNSHPTQMVSYDTFLHYLENGAIKKVDLYENAELAVFDAFESLDQNLLKPVPLLSSDTLFGILN----SDEFRPIGVKIPVRNSSLILTLRDYKIDFTAYPIVNFDSIWPILSVLLIPVLLIVVYRLFFSEGSNYDFFGNLRKARAKIQLDADTGVLFSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRGTGVGGT 310          
BLAST of mRNA_H-paniculata_contig57744.13361.1 vs. uniprot
Match: A0A516ICZ0_9PHAE (ATP-dependent zinc metalloprotease FtsH n=46 Tax=Phaeophyceae TaxID=2870 RepID=A0A516ICZ0_9PHAE)

HSP 1 Score: 466 bits (1199), Expect = 7.040e-159
Identity = 241/308 (78.25%), Postives = 265/308 (86.04%), Query Frame = 1
Query:    1 MKNQTLRNFIIVLVGVALISGFVYLKWDNFTDLGTNLINFKNSHPISIVSYDTFLRYLENGGIKKVDLYENAEIAVFNTFDSLDLNLIKSDTSFAFLNNFLSSDGLQHVGVKIPVRNSSLILTLREYKIDFTAYPIVSFDSVWPILSVLLIPVLLIVVYRLFFSEGSNYDFFGNLRKARAKIQLDADTGVLFSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRVTGVGWT 924
            MKN+T + F I+L+G+A+ISGFVY KWDNF DLG+NLIN+K SHP  ++S+D FL YLENG IKKVDLYENAEI VF+ F SL                    D LQH+GVK+P+RNSSLIL LREY+IDFTA+P V+F+S W ILS LL+PVLL+VV++LFFSEGSNYDFFGNLRKARAKIQLDA+TGV FSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQR TGVG T
Sbjct:    1 MKNETPKIFYILLIGLAVISGFVYFKWDNFLDLGSNLINYKESHPSEMISFDKFLSYLENGDIKKVDLYENAEIVVFDAFGSL-------------------GDKLQHIGVKVPIRNSSLILKLREYQIDFTAHPAVTFESAWSILSALLVPVLLLVVFQLFFSEGSNYDFFGNLRKARAKIQLDANTGVSFSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRGTGVGGT 289          
BLAST of mRNA_H-paniculata_contig57744.13361.1 vs. uniprot
Match: A0A8F0F796_9PHAE (ATP-dependent zinc metalloprotease FtsH n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F796_9PHAE)

HSP 1 Score: 440 bits (1131), Expect = 1.710e-148
Identity = 227/308 (73.70%), Postives = 257/308 (83.44%), Query Frame = 1
Query:    1 MKNQTLRNFIIVLVGVALISGFVYLKWDNFTDLGTNLINFKNSHPISIVSYDTFLRYLENGGIKKVDLYENAEIAVFNTFDSLDLNLIKSDTSFAFLNNFLSSDGLQHVGVKIPVRNSSLILTLREYKIDFTAYPIVSFDSVWPILSVLLIPVLLIVVYRLFFSEGSNYDFFGNLRKARAKIQLDADTGVLFSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRVTGVGWT 924
            MK++T R F ++L+G+ L + FVYLKWD+F DL +NLIN+KNSHP  ++ +D F   LENG IKKVDLYENAEIA+F+ FD++D  L                   +HVGVKIP+RNSSLIL LRE+KIDFT+YP V FDS W I+S LLIP L++ +++L FSEGSNYDFF N+RKARAKIQLDADTGV F+DVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIG+QR TGVG T
Sbjct:    1 MKSETPRIFYLILIGLGLTAVFVYLKWDDFLDLTSNLINYKNSHPSEMIPFDQFASSLENGDIKKVDLYENAEIAIFDVFDTMDQKL-------------------KHVGVKIPIRNSSLILKLREFKIDFTSYPNVVFDSAWSIISALLIPFLILFIFQLLFSEGSNYDFFSNIRKARAKIQLDADTGVSFNDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGQQRGTGVGGT 289          
BLAST of mRNA_H-paniculata_contig57744.13361.1 vs. uniprot
Match: A0A2I4Q2K0_9PHAE (ATP-dependent zinc metalloprotease FtsH n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2K0_9PHAE)

HSP 1 Score: 397 bits (1020), Expect = 7.660e-132
Identity = 208/309 (67.31%), Postives = 246/309 (79.61%), Query Frame = 1
Query:    1 MKNQTLRNFIIVLVGVAL-ISGFVYLKWDNFTDLGTNLINFKNSHPISIVSYDTFLRYLENGGIKKVDLYENAEIAVFNTFDSLDLNLIKSDTSFAFLNNFLSSDGLQHVGVKIPVRNSSLILTLREYKIDFTAYPIVSFDSVWPILSVLLIPVLLIVVYRLFFSEGSNYDFFGNLRKARAKIQLDADTGVLFSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRVTGVGWT 924
            M+N  LR F + L+ V +  SGFV++KWD F DL  NLI +++SHP+ IVS++  L  L+   + K D YENAEI VF+ FDS+D  L                   +HVGVKIP+RNS+LI+ L+E+++DFT++    FDSVW ILS L+IP++++V+  L FS+G+NYD FGNLRKARA IQLDADTGV F+DVAGID+AKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEF+EMFVGIGASRVRDLF+TAERNSPCILFIDEIDAIGRQR TGVG T
Sbjct:    1 MENNFLRVFFVRLILVLIPTSGFVFVKWDAFVDLAKNLIKYRDSHPLQIVSFEKLLDSLDKKEVIKADFYENAEIVVFDLFDSVDQKL-------------------KHVGVKIPIRNSALIMKLKEFQVDFTSHSGAVFDSVWSILSALIIPIIILVILFLVFSDGNNYDVFGNLRKARATIQLDADTGVSFADVAGIDDAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFIEMFVGIGASRVRDLFQTAERNSPCILFIDEIDAIGRQRGTGVGGT 290          
BLAST of mRNA_H-paniculata_contig57744.13361.1 vs. uniprot
Match: A0A8E6D6D3_9PHAE (ATP-dependent zinc metalloprotease FtsH n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D6D3_9PHAE)

HSP 1 Score: 373 bits (958), Expect = 3.720e-122
Identity = 203/319 (63.64%), Postives = 241/319 (75.55%), Query Frame = 1
Query:    1 MKNQTLRNFIIVLVGVALISGFVYLKWDNFTDLGTNLINFKNSHPISIVSYDTFLRYLENGGIKKVDLYENAEIAVFNTFDSLDLNLIKSDTSFAFLNNFLSSDGLQHVGVKIPVRNSSLILTLREYKIDFTAYPIVSFDSVWPILSVLLIPVLLI----VVYRLFFSEGSNYDFFGNL-------RKARAKIQLDADTGVLFSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRVTGVGWT 924
            MK +  R F I+L+ + + S F+Y K ++F DL  N+IN++ SHP ++VS++ F   L+ G I K+DLYEN  +AVF+  DSL                    +  + +GV IPVR SS+I+ LRE  +DFTA+P VSFDS+  ILS L IP LL+    +++++F S+G N DFF NL       RKARAK+QLDA+TGVLF+DVAGIDEAKQEFEEFV+FLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQR TGVG T
Sbjct:    1 MKFEISRVFYIILIVLLICSAFIYFKREDFLDLANNIINYRASHPNNMVSFEDFSDRLQRGEITKLDLYENGRVAVFDAIDSL-------------------GNSFKQLGVSIPVRGSSVIVKLREANVDFTAHPAVSFDSILSILSALFIPFLLLGVPFLIFQIFASQGGNSDFFSNLTNQFMNVRKARAKVQLDAETGVLFTDVAGIDEAKQEFEEFVTFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRGTGVGGT 300          
BLAST of mRNA_H-paniculata_contig57744.13361.1 vs. uniprot
Match: A0A7S6U9Z9_9STRA (ATP-dependent zinc metalloprotease FtsH n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9Z9_9STRA)

HSP 1 Score: 294 bits (753), Expect = 2.220e-91
Identity = 169/307 (55.05%), Postives = 208/307 (67.75%), Query Frame = 1
Query:   46 VALISGFVYLKWDNFTDLGTNLINFKNSHPISIVSYDTFLRYLENGGIKKVDLYENAEIAVFNTFDSLDLNLIKSDTSFAFLNNFLSSDGLQHVGVKIPVRNSSLILTLREYKIDFTAYPIVSFDSVWPILSVLLIPVLLIVVYRLFFS-----EGSNYDFFG---------NLRKARAKIQLDADTGVLFSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRVTGVGWT 924
            + LIS   YLK DN  +LG NL ++++      + YD F  YLE   IK+VD YEN +IA+ +  +              F  N L S     V + +    S LI+ LR+ K DFT +P  S++++W ++   + P+L++ +  L  +     E  + DFF          N RKAR KIQLDA+TGVLF DVAGIDEAKQEFEE V+FL+ PQLFTAVGANPPKGVI+VGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLF+ A++NSPCILFIDEIDA+GR+R TGVG T
Sbjct:    9 ILLISLIGYLKRDNIAELGINLADWRDRQIKESIEYDKFKEYLEKDRIKRVDFYENEQIAIVDIANP------------EFGTNSLKS----RVELPLGPSPSDLIVKLRKLKTDFTVHPSFSYETLWSVIGAFVFPLLILGLMSLILNFSNSNEWGDNDFFSGFGGPGQLMNFRKARVKIQLDANTGVLFKDVAGIDEAKQEFEEVVTFLQQPQLFTAVGANPPKGVILVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFKIAQQNSPCILFIDEIDAVGRKRGTGVGGT 299          
BLAST of mRNA_H-paniculata_contig57744.13361.1 vs. uniprot
Match: FTSH_VAULI (ATP-dependent zinc metalloprotease FtsH n=1 Tax=Vaucheria litorea TaxID=109269 RepID=FTSH_VAULI)

HSP 1 Score: 257 bits (657), Expect = 1.960e-77
Identity = 148/282 (52.48%), Postives = 193/282 (68.44%), Query Frame = 1
Query:   97 LGTNLINF----KNSHPISIVSYDTFLRYLENGGIKKVDLYENAEIAVFNTFDSLDLNLIKSDTSFAFLNNFLSSDGLQHVGVKIPVRNSSLILTLREYKIDFTAYPIVSFDSVWPILSVLLIPVLLIVVYRLFFSEGSNY----DFFGNLRKARAKIQLDADTGVLFSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRVTGVG 918
            +  N+IN     +NS+ I + +Y  FL YL+ G IKKVD Y+N  IA+     S +L                  D LQ + V+IPV +S LI+ LR  K+DFTA+  ++   ++  LS + IP+++I+     F   +N+        + RKARAK+Q + +T V+F DVAGIDE K+EFEE V+FL+ PQ F +VGA  PKGVI++GPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLF+TA++N+PCI+FIDEIDA+GRQR  G+G
Sbjct:   26 ISNNIINNFNTKQNSNNIKM-TYGRFLEYLDMGWIKKVDFYDNGRIAIIEA-SSPELG-----------------DRLQKIRVEIPVGDSPLIVKLRTAKVDFTAHSTINSKGIFTQLSNIFIPLIIIIGLIFLFRRSTNFMSGPGQLMSFRKARAKVQTEINTDVVFDDVAGIDEVKEEFEEVVTFLRKPQRFLSVGAKIPKGVILIGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFKTAQQNAPCIVFIDEIDAVGRQRGAGIG 288          
BLAST of mRNA_H-paniculata_contig57744.13361.1 vs. uniprot
Match: A0A1C9CDI0_CERJP (ATP-dependent zinc metalloprotease FtsH n=6 Tax=Ceramiaceae TaxID=31377 RepID=A0A1C9CDI0_CERJP)

HSP 1 Score: 254 bits (648), Expect = 2.600e-76
Identity = 151/307 (49.19%), Postives = 195/307 (63.52%), Query Frame = 1
Query:   19 RNFIIVLVGVALISGFVYLKWDNFTDLGTNLINFKNSHPISIVSYDTFLRYLENGGIKKVDLYENAEIAVFNTFDSLDLNLIKSDTSFAFLNNFLSSDGLQHVGVKIPVRNSSLILTLREYKIDFTAYPIVSFDSVWPILSVLLIPVLLIVVYRLFFSEGSNYD-------FFGNLRKARAKIQLDADTGVLFSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRVTGVG 918
            +NF++  + + +I   V+  W  F    TN +N  N+   S ++Y  FL YL  G +KKVD+Y+N   A+         N I                  Q + V++P     LI  L+E  +D  A+PI S +S+W ++S LL P+LLI    L F   +N          FG   K++A  Q++A TG++F DVAGIDEAK+EFEE V+FLK P+ FTAVGA  PKGV++VGPPGTGKTLLAKAIAGEA VPF SISGSEFVEMFVG+GASRVRDLF+ A+ N+PCI+FIDEIDA+GRQR TGVG
Sbjct:    6 KNFLLWSLPILVI---VFFVWQGFFAPTTNEVN--NNIANSRMTYGRFLEYLNMGWVKKVDIYDNGHTAIVEAIGPELGNRI------------------QKIRVELPASAPELISKLKENHVDVNAHPIKSSNSLWNLISNLLFPLLLITGLALLFRRSNNSAGGPGQTMSFG---KSKALFQMEAKTGIVFDDVAGIDEAKEEFEEIVTFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEANVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFIDEIDAVGRQRGTGVG 286          
BLAST of mRNA_H-paniculata_contig57744.13361.1 vs. uniprot
Match: A0A1Z1M7J4_BOSMO (ATP-dependent zinc metalloprotease FtsH n=2 Tax=Rhodomelaceae TaxID=2803 RepID=A0A1Z1M7J4_BOSMO)

HSP 1 Score: 250 bits (638), Expect = 7.770e-75
Identity = 149/307 (48.53%), Postives = 193/307 (62.87%), Query Frame = 1
Query:   19 RNFIIVLVGVALISGFVYLKWDNFTDLGTNLINFKNSHPISIVSYDTFLRYLENGGIKKVDLYENAEIAVFNTFDSLDLNLIKSDTSFAFLNNFLSSDGLQHVGVKIPVRNSSLILTLREYKIDFTAYPIVSFDSVWPILSVLLIPVLLIVVYRLFFSEGSNYD-------FFGNLRKARAKIQLDADTGVLFSDVAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRVTGVG 918
            +N ++  + + +IS FV   W  F    TN  N  NS+  S ++Y  FL YL+ G +KKVD+Y+N   A+         N I                  Q + V++P     LI  LR+ KID  A+P  +  ++W I+  L  P+LLIV     F   +N          FG   K++A  Q++A TG++F DVAGIDEAK+EFEE V+FLK P+ FTAVGA  PKGV+++GPPGTGKTLLAKAIAGEA VPF SISGSEFVEMFVG+GASRVRDLF+ A+ N+PCI+FIDEIDA+GRQR TG+G
Sbjct:    6 KNLLLWSLPLLVISFFV---WQGFFAPVTNESN--NSNSNSRMTYGRFLEYLDMGWVKKVDIYDNGHTAIIEAIGPELGNRI------------------QKIRVELPTSAPELITQLRKNKIDLNAHPTKNNTALWNIIGNLFFPLLLIVSLAFLFRRSNNTTGGPGQAMSFG---KSKALFQIEAKTGIVFDDVAGIDEAKEEFEEIVTFLKKPEYFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEANVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFIDEIDAVGRQRGTGIG 286          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig57744.13361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B7F1L2_9PHAE2.490e-19896.10ATP-dependent zinc metalloprotease FtsH n=5 Tax=Ec... [more]
FTSH_ECTSI2.620e-17986.31ATP-dependent zinc metalloprotease FtsH n=3 Tax=Ec... [more]
A0A516ICZ0_9PHAE7.040e-15978.25ATP-dependent zinc metalloprotease FtsH n=46 Tax=P... [more]
A0A8F0F796_9PHAE1.710e-14873.70ATP-dependent zinc metalloprotease FtsH n=1 Tax=Pr... [more]
A0A2I4Q2K0_9PHAE7.660e-13267.31ATP-dependent zinc metalloprotease FtsH n=1 Tax=Di... [more]
A0A8E6D6D3_9PHAE3.720e-12263.64ATP-dependent zinc metalloprotease FtsH n=1 Tax=Is... [more]
A0A7S6U9Z9_9STRA2.220e-9155.05ATP-dependent zinc metalloprotease FtsH n=1 Tax=Sc... [more]
FTSH_VAULI1.960e-7752.48ATP-dependent zinc metalloprotease FtsH n=1 Tax=Va... [more]
A0A1C9CDI0_CERJP2.600e-7649.19ATP-dependent zinc metalloprotease FtsH n=6 Tax=Ce... [more]
A0A1Z1M7J4_BOSMO7.770e-7548.53ATP-dependent zinc metalloprotease FtsH n=2 Tax=Rh... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig57744contigH-paniculata_contig57744:3..926 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score528.1
Seed ortholog evalue2.8e-147
Seed eggNOG ortholog2880.D1J722
Preferred nameftsH
KEGG koko:K03798
KEGG ModuleM00742
Hectar predicted targeting categorysignal anchor
GOsGO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0006508,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0009314,GO:0009416,GO:0009507,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009628,GO:0009642,GO:0009644,GO:0009657,GO:0009658,GO:0009668,GO:0009719,GO:0009725,GO:0009735,GO:0009765,GO:0009892,GO:0009941,GO:0009987,GO:0010027,GO:0010033,GO:0010109,GO:0010205,GO:0010206,GO:0010304,GO:0015979,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019538,GO:0019684,GO:0022607,GO:0030091,GO:0030163,GO:0031323,GO:0031324,GO:0031967,GO:0031975,GO:0031976,GO:0031977,GO:0031984,GO:0034357,GO:0034622,GO:0042221,GO:0042548,GO:0042623,GO:0042651,GO:0043155,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043467,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0048564,GO:0050789,GO:0050794,GO:0050896,GO:0055035,GO:0061024,GO:0065003,GO:0065007,GO:0070011,GO:0071704,GO:0071840,GO:0072593,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1905156
EggNOG free text desc.metalloendopeptidase activity
EggNOG OGsCOG0465@1,KOG0731@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00002,ko01000,ko01002,ko03110
Exons1
Model size924
Cds size924
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930625.9768124-CDS-H-paniculata_contig57744:2..9261622930625.9768124-CDS-H-paniculata_contig57744:2..926Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig57744 3..926 -
1691481378.3570826-CDS-H-paniculata_contig57744:2..9261691481378.3570826-CDS-H-paniculata_contig57744:2..926Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig57744 3..926 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig57744.13361.1prot_H-paniculata_contig57744.13361.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig57744 3..926 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig57744.13361.1

>prot_H-paniculata_contig57744.13361.1 ID=prot_H-paniculata_contig57744.13361.1|Name=mRNA_H-paniculata_contig57744.13361.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=308bp
MKNQTLRNFIIVLVGVALISGFVYLKWDNFTDLGTNLINFKNSHPISIVS
YDTFLRYLENGGIKKVDLYENAEIAVFNTFDSLDLNLIKSDTSFAFLNNF
LSSDGLQHVGVKIPVRNSSLILTLREYKIDFTAYPIVSFDSVWPILSVLL
IPVLLIVVYRLFFSEGSNYDFFGNLRKARAKIQLDADTGVLFSDVAGIDE
AKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEA
GVPFISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQ
RVTGVGWT
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mRNA from alignment at H-paniculata_contig57744:3..926-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig57744.13361.1 ID=mRNA_H-paniculata_contig57744.13361.1|Name=mRNA_H-paniculata_contig57744.13361.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=924bp|location=Sequence derived from alignment at H-paniculata_contig57744:3..926- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAAATCAAACTTTAAGGAATTTTATTATAGTTTTAGTTGGAGTAGC ACTGATTTCAGGTTTTGTTTATTTAAAATGGGATAATTTTACTGATTTAG GAACTAATTTAATTAATTTTAAAAACAGTCATCCAATAAGCATCGTTTCA TATGATACATTTTTACGTTATTTAGAAAATGGTGGTATAAAAAAAGTAGA TTTATATGAAAATGCTGAAATAGCAGTGTTTAATACTTTTGATTCGCTAG ATCTGAATCTTATAAAATCAGATACAAGCTTTGCATTCTTAAATAATTTT TTGTCTAGTGATGGGTTACAACATGTAGGTGTAAAAATACCTGTTAGAAA TTCTTCTTTAATTTTAACATTACGCGAATATAAAATAGATTTTACAGCTT ACCCAATTGTAAGTTTTGATTCAGTCTGGCCTATTCTAAGTGTTTTATTA ATTCCAGTTTTACTTATAGTTGTTTACCGACTTTTTTTTTCTGAAGGTAG TAATTACGATTTTTTTGGGAACTTACGTAAAGCTAGAGCAAAAATCCAAT TAGATGCTGACACTGGAGTTTTATTTAGTGATGTTGCTGGGATTGATGAG GCTAAACAAGAATTTGAAGAGTTTGTTTCTTTCTTAAAAATGCCACAGTT GTTCACAGCCGTGGGAGCTAATCCACCTAAAGGGGTAATAATTGTTGGGC CTCCTGGTACTGGAAAAACTTTATTAGCAAAAGCAATTGCTGGAGAAGCA GGAGTACCATTTATTAGTATTTCTGGGTCTGAGTTTGTAGAAATGTTTGT TGGGATTGGTGCTTCGCGTGTTCGTGACTTATTTGAGACTGCTGAACGAA ATTCCCCTTGTATTTTATTTATCGATGAAATTGATGCGATTGGAAGACAA CGTGTTACAGGTGTGGGATGGACG
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Coding sequence (CDS) from alignment at H-paniculata_contig57744:3..926-

>mRNA_H-paniculata_contig57744.13361.1 ID=mRNA_H-paniculata_contig57744.13361.1|Name=mRNA_H-paniculata_contig57744.13361.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1848bp|location=Sequence derived from alignment at H-paniculata_contig57744:3..926- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAAATCAAACTTTAAGGAATTTTATTATAGTTTTAGTTGGAGTAGC
ACTGATTTCAGGTTTTGTTTATTTAAAATGGGATAATTTTACTGATTTAG
GAACTAATTTAATTAATTTTAAAAACAGTCATCCAATAAGCATCGTTTCA
TATGATACATTTTTACGTTATTTAGAAAATGGTGGTATAAAAAAAGTAGA
TTTATATGAAAATGCTGAAATAGCAGTGTTTAATACTTTTGATTCGCTAG
ATCTGAATCTTATAAAATCAGATACAAGCTTTGCATTCTTAAATAATTTT
TTGTCTAGTGATGGGTTACAACATGTAGGTGTAAAAATACCTGTTAGAAA
TTCTTCTTTAATTTTAACATTACGCGAATATAAAATAGATTTTACAGCTT
ACCCAATTGTAAGTTTTGATTCAGTCTGGCCTATTCTAAGTGTTTTATTA
ATTCCAGTTTTACTTATAGTTGTTTACCGACTTTTTTTTTCTGAAGGTAG
TAATTACGATTTTTTTGGGAACTTACGTAAAGCTAGAGCAAAAATCCAAT
TAGATGCTGACACTGGAGTTTTATTTAGTGATGTTGCTGGGATTGATGAG
GCTAAACAAGAATTTGAAGAGTTTGTTTCTTTCTTAAAAATGCCACAGTT
GTTCACAGCCGTGGGAGCTAATCCACCTAAAGGGGTAATAATTGTTGGGC
CTCCTGGTACTGGAAAAACTTTATTAGCAAAAGCAATTGCTGGAGAAGCA
GGAGTACCATTTATTAGTATTTCTGGGTCTGAGTTTGTAGAAATGTTTGT
TGGGATTGGTGCTTCGCGTGTTCGTGACTTATTTGAGACTGCTGAACGAA
ATTCCCCTTGTATTTTATTTATCGATGAAATTGATGCGATTGGAAGACAA
CGTGTTACAGGTGTGGGATGGACGATGAAAAATCAAACTTTAAGGAATTT
TATTATAGTTTTAGTTGGAGTAGCACTGATTTCAGGTTTTGTTTATTTAA
AATGGGATAATTTTACTGATTTAGGAACTAATTTAATTAATTTTAAAAAC
AGTCATCCAATAAGCATCGTTTCATATGATACATTTTTACGTTATTTAGA
AAATGGTGGTATAAAAAAAGTAGATTTATATGAAAATGCTGAAATAGCAG
TGTTTAATACTTTTGATTCGCTAGATCTGAATCTTATAAAATCAGATACA
AGCTTTGCATTCTTAAATAATTTTTTGTCTAGTGATGGGTTACAACATGT
AGGTGTAAAAATACCTGTTAGAAATTCTTCTTTAATTTTAACATTACGCG
AATATAAAATAGATTTTACAGCTTACCCAATTGTAAGTTTTGATTCAGTC
TGGCCTATTCTAAGTGTTTTATTAATTCCAGTTTTACTTATAGTTGTTTA
CCGACTTTTTTTTTCTGAAGGTAGTAATTACGATTTTTTTGGGAACTTAC
GTAAAGCTAGAGCAAAAATCCAATTAGATGCTGACACTGGAGTTTTATTT
AGTGATGTTGCTGGGATTGATGAGGCTAAACAAGAATTTGAAGAGTTTGT
TTCTTTCTTAAAAATGCCACAGTTGTTCACAGCCGTGGGAGCTAATCCAC
CTAAAGGGGTAATAATTGTTGGGCCTCCTGGTACTGGAAAAACTTTATTA
GCAAAAGCAATTGCTGGAGAAGCAGGAGTACCATTTATTAGTATTTCTGG
GTCTGAGTTTGTAGAAATGTTTGTTGGGATTGGTGCTTCGCGTGTTCGTG
ACTTATTTGAGACTGCTGAACGAAATTCCCCTTGTATTTTATTTATCGAT
GAAATTGATGCGATTGGAAGACAACGTGTTACAGGTGTGGGATGGACG
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