prot_H-paniculata_contig5774.13358.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5774.13358.1
Unique Nameprot_H-paniculata_contig5774.13358.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length127
Homology
BLAST of mRNA_H-paniculata_contig5774.13358.1 vs. uniprot
Match: D8LNH2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNH2_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 2.170e-22
Identity = 64/120 (53.33%), Postives = 73/120 (60.83%), Query Frame = 0
Query:    1 MVRIINGEIVSDDDPRVKRVQRRSGTGRGDTGGGGGQSRAGYGRVVSLLDSPAPSD--GSSSRGRGQGGEEAGQVEQRGVLKAVAEAIGVHGRFVRVPGALGVPEKQVPVVNFIICAIAV 118
            MVRIINGEIVSDDDPRV   QRR   G         Q RAGYG V SLLD P+ ++  G  +RG   GG  AG     G L  +AE IGV GR V +PGALGV E+QVP V  +I A+ V
Sbjct:    1 MVRIINGEIVSDDDPRVAGPQRR---GXXXXXXXXXQGRAGYGHVASLLDPPSTAEATGGGARGPAAGGRGAGA--STGPLDKLAEMIGVQGRTVTIPGALGVQEQQVPFVYLMIAALVV 115          
BLAST of mRNA_H-paniculata_contig5774.13358.1 vs. uniprot
Match: A0A836CLX7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX7_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 8.920e-7
Identity = 38/115 (33.04%), Postives = 58/115 (50.43%), Query Frame = 0
Query:    2 VRIINGEIVSDDDPRVK-RVQRRSGTGRGDTGGGGGQSRAGYGRVVSLLDSPAPSDGSSSRGRGQGGEEAGQVEQRGVLKAVAEAIGVHGRFVRVPGALGVPEKQVPVVNFIICA 115
            VRIINGEIV D+DPR++ R Q  + T RG  G G G +R            P PS  + + G  +             L+ +A+ +GV G+ + +P   GVP + V V++ ++ A
Sbjct:    1 VRIINGEIVQDNDPRLRQRTQSAATTARGGFGAGDGAAR------------PTPSAAAMAGGAAES-----------PLQRLADMLGVKGKTITIPAVFGVPSRDVEVIHLLLVA 92          
BLAST of mRNA_H-paniculata_contig5774.13358.1 vs. uniprot
Match: A0A7S2C2E5_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C2E5_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 1.380e-5
Identity = 41/127 (32.28%), Postives = 63/127 (49.61%), Query Frame = 0
Query:    1 MVRIINGEIVSDDDPRVKRVQRRSGTGRG------DTGGGGGQ----SRAGYGRVVSLLDS-PAPSDGSSSRGRGQGGEEAGQVEQRGVLKAVAEAIGVHGRFVRVPGALGVPEKQVPVVNFIICAI 116
            MV+IINGEIV DDDPR +R+++R+   +       + GG GG+    SR G G       S P  SD             A Q     +++ +A+ + + GR V +P   GVP+ +V ++  II  +
Sbjct:    6 MVKIINGEIVQDDDPRAQRLRQRASAAQRPIPTSVNFGGSGGRAHSSSRGGNGGFGGTPPSTPVASD------------PAQQNPLMKIVQQLAKFLNIEGRLVTIPAVFGVPQSEVELIYLIIIGV 120          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5774.13358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LNH2_ECTSI2.170e-2253.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLX7_9STRA8.920e-733.04Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S2C2E5_9STRA1.380e-532.28Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5774contigH-paniculata_contig5774:717..10018 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5774.13358.1mRNA_H-paniculata_contig5774.13358.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5774 594..10018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5774.13358.1 ID=prot_H-paniculata_contig5774.13358.1|Name=mRNA_H-paniculata_contig5774.13358.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp
MVRIINGEIVSDDDPRVKRVQRRSGTGRGDTGGGGGQSRAGYGRVVSLLD
SPAPSDGSSSRGRGQGGEEAGQVEQRGVLKAVAEAIGVHGRFVRVPGALG
VPEKQVPVVNFIICAIAVSSFPFCLV*
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