prot_H-paniculata_contig57664.13349.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig57664.13349.1
Unique Nameprot_H-paniculata_contig57664.13349.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
BLAST of mRNA_H-paniculata_contig57664.13349.1 vs. uniprot
Match: UPI001CB79F24 (hypothetical protein n=1 Tax=Blastococcus sp. CPCC 205250 TaxID=2732513 RepID=UPI001CB79F24)

HSP 1 Score: 85.1 bits (209), Expect = 1.220e-18
Identity = 40/86 (46.51%), Postives = 61/86 (70.93%), Query Frame = 0
Query:    1 DLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQAFSQVEVEDFFEISAPVACMSTLRTVFSLASEYDFELEGMDLDAAYLN 86
            +L +LP   KA   KW+FKRK   +G + +YKARLVA+ ++Q+E  D+ EI +PVA ++++RTV S A+ YD E+E MD+  A+L+
Sbjct:  111 NLVKLPKDRKAIGCKWVFKRKQDAEGKIGKYKARLVAKGYAQIEGVDYAEIFSPVAKLTSIRTVLSAAAAYDLEIEQMDVKTAFLH 196          
BLAST of mRNA_H-paniculata_contig57664.13349.1 vs. uniprot
Match: UPI001CA468C4 (hypothetical protein n=1 Tax=Xylella fastidiosa TaxID=2371 RepID=UPI001CA468C4)

HSP 1 Score: 82.0 bits (201), Expect = 3.850e-18
Identity = 40/85 (47.06%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    2 LGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQAFSQVEVEDFFEISAPVACMSTLRTVFSLASEYDFELEGMDLDAAYLN 86
            L  LP G KA   KWIFK+K+K DG++ ++KARLVA+ F+Q E  D+F+  APVA +ST+R + ++AS +   +  MD+  A+LN
Sbjct:    8 LADLPPGSKAIGCKWIFKKKMKVDGTIDKFKARLVAKGFTQKEGIDYFDTYAPVARISTIRVLLAIASIHKLHIHQMDVKTAFLN 92          
BLAST of mRNA_H-paniculata_contig57664.13349.1 vs. uniprot
Match: A0A4Y1R7U6_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R7U6_PRUDU)

HSP 1 Score: 84.0 bits (206), Expect = 5.070e-18
Identity = 40/85 (47.06%), Postives = 62/85 (72.94%), Query Frame = 0
Query:    2 LGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQAFSQVEVEDFFEISAPVACMSTLRTVFSLASEYDFELEGMDLDAAYLN 86
            L  LPAG KA   KW+F++KLK DGS+ +YKARLVA+ F+Q +  D+F+  +PV+ ++T+RT+ +LAS ++  +  MD+  A+LN
Sbjct:   27 LTNLPAGNKAIGCKWVFRKKLKPDGSIDKYKARLVAKGFTQKKGIDYFDTYSPVSRITTIRTLIALASVHNLVIHQMDVKTAFLN 111          
BLAST of mRNA_H-paniculata_contig57664.13349.1 vs. uniprot
Match: A0A5E8C1W8_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1W8_9ASCO)

HSP 1 Score: 84.7 bits (208), Expect = 7.680e-18
Identity = 42/86 (48.84%), Postives = 59/86 (68.60%), Query Frame = 0
Query:    1 DLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQAFSQVEVEDFFEISAPVACMSTLRTVFSLASEYDFELEGMDLDAAYLN 86
            +L  LP G KA ++KW+FK K K DGS+ RYKARLV   FSQVE  D+ E  APV    T+R V ++A+++ F++  MD++ A+LN
Sbjct:  100 ELVDLPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLN 185          
BLAST of mRNA_H-paniculata_contig57664.13349.1 vs. uniprot
Match: A0A6L2LJ48_TANCI (Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2LJ48_TANCI)

HSP 1 Score: 85.9 bits (211), Expect = 1.050e-17
Identity = 44/86 (51.16%), Postives = 58/86 (67.44%), Query Frame = 0
Query:    1 DLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQAFSQVEVEDFFEISAPVACMSTLRTVFSLASEYDFELEGMDLDAAYLN 86
            +L  LP G KA   KWI KRK+K DGS+ +YKARLV Q F Q E  DFF+  APVA +ST+R + +LA+ +D  +  MD+  A+LN
Sbjct:    7 ELTDLPPGCKALRCKWIIKRKMKVDGSIDKYKARLVIQGFRQNEGIDFFDTYAPVARISTIRLLLALAAIHDLVIHQMDVKTAFLN 92          
BLAST of mRNA_H-paniculata_contig57664.13349.1 vs. uniprot
Match: A0A392SCS1_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392SCS1_9FABA)

HSP 1 Score: 79.7 bits (195), Expect = 1.290e-17
Identity = 38/85 (44.71%), Postives = 61/85 (71.76%), Query Frame = 0
Query:    1 DLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQAFSQVEVEDFFEISAPVACMSTLRTVFSLASEYDFELEGMDLDAAYL 85
            D+  LP G+K   +KW++K K K  G++ RYKARLVA+ ++QVE  D+F+  +PVA M+T+RTV ++AS  ++ +  +D+D A+L
Sbjct:   15 DIVDLPEGVKPIGSKWVYKLKRKAYGTIDRYKARLVAKGYNQVEGVDYFQSFSPVAKMTTIRTVLAIASIQNWHIHQLDVDNAFL 99          
BLAST of mRNA_H-paniculata_contig57664.13349.1 vs. uniprot
Match: Q8LSK0_MAIZE (Gag and Pol n=2 Tax=Zea mays TaxID=4577 RepID=Q8LSK0_MAIZE)

HSP 1 Score: 85.5 bits (210), Expect = 1.560e-17
Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    6 PAGLKATHTKWIFKRKLKEDGSVARYKARLVAQAFSQVEVEDFFEISAPVACMSTLRTVFSLASEYDFELEGMDLDAAYLN 86
            P G K    KW+FK+KLK DG++ +YKARLVA+ ++Q E EDFF+  +PVA M+T+R + SLA+ Y   +  MD+  A+LN
Sbjct:  791 PYGCKPVGCKWVFKKKLKPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARMTTIRVLLSLAASYGLLVHQMDVKTAFLN 871          
BLAST of mRNA_H-paniculata_contig57664.13349.1 vs. uniprot
Match: A0A392PGT3_9FABA (Putative retroelement pol polyprotein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392PGT3_9FABA)

HSP 1 Score: 83.2 bits (204), Expect = 1.810e-17
Identity = 40/82 (48.78%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    5 LPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQAFSQVEVEDFFEISAPVACMSTLRTVFSLASEYDFELEGMDLDAAYLN 86
            LP G KA   KW++K K K DGS+ RYKARLVA+ ++QVE  D+FE  +PVA M+T+R V ++AS  ++ +  +D+D A+L+
Sbjct:  164 LPVGAKAIGRKWVYKIKRKSDGSIERYKARLVAKGYNQVEGIDYFETFSPVAKMTTIRVVLAIASSKNWFIHQLDVDNAFLH 245          
BLAST of mRNA_H-paniculata_contig57664.13349.1 vs. uniprot
Match: A0A5N6Q4G6_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6Q4G6_9ASTR)

HSP 1 Score: 83.6 bits (205), Expect = 1.830e-17
Identity = 43/82 (52.44%), Postives = 55/82 (67.07%), Query Frame = 0
Query:    5 LPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQAFSQVEVEDFFEISAPVACMSTLRTVFSLASEYDFELEGMDLDAAYLN 86
            LP G K    KWIFKRK+K DGS+ +YKARLV Q F Q E  DFF+  APVA +ST+R + +LAS +   +  MD+  A+LN
Sbjct:   15 LPPGCKPLGCKWIFKRKMKVDGSIDKYKARLVIQGFRQKEGTDFFDTYAPVARISTIRLLIALASIHKLLIHQMDVKTAFLN 96          
BLAST of mRNA_H-paniculata_contig57664.13349.1 vs. uniprot
Match: A0A177TL22_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TL22_9BASI)

HSP 1 Score: 85.1 bits (209), Expect = 2.120e-17
Identity = 42/86 (48.84%), Postives = 59/86 (68.60%), Query Frame = 0
Query:    1 DLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQAFSQVEVEDFFEISAPVACMSTLRTVFSLASEYDFELEGMDLDAAYLN 86
            DL  LPAG KA  ++W++K KL EDG   R+KARLVAQ F+QV   D+FE  APVA + +LR + +LA+ + + +  +D+  AYLN
Sbjct:  666 DLVELPAGRKAIGSRWVYKLKLNEDGMADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVDVVTAYLN 751          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig57664.13349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001CB79F241.220e-1846.51hypothetical protein n=1 Tax=Blastococcus sp. CPCC... [more]
UPI001CA468C43.850e-1847.06hypothetical protein n=1 Tax=Xylella fastidiosa Ta... [more]
A0A4Y1R7U6_PRUDU5.070e-1847.06Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A5E8C1W8_9ASCO7.680e-1848.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6L2LJ48_TANCI1.050e-1751.16Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerarii... [more]
A0A392SCS1_9FABA1.290e-1744.71Retrovirus-related Pol polyprotein from transposon... [more]
Q8LSK0_MAIZE1.560e-1749.38Gag and Pol n=2 Tax=Zea mays TaxID=4577 RepID=Q8LS... [more]
A0A392PGT3_9FABA1.810e-1748.78Putative retroelement pol polyprotein (Fragment) n... [more]
A0A5N6Q4G6_9ASTR1.830e-1752.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177TL22_9BASI2.120e-1748.84Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..86
e-value: 4.8E-19
score: 69.0
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..86
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 2..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig57664contigH-paniculata_contig57664:247..504 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig57664.13349.1mRNA_H-paniculata_contig57664.13349.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig57664 247..504 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig57664.13349.1 ID=prot_H-paniculata_contig57664.13349.1|Name=mRNA_H-paniculata_contig57664.13349.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
DLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQAFSQVEVEDFFE
ISAPVACMSTLRTVFSLASEYDFELEGMDLDAAYLN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like