mRNA_H-paniculata_contig5766.13346.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5766.13346.1 vs. uniprot
Match: A0A6H5KHK7_9PHAE (HSP70 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK7_9PHAE) HSP 1 Score: 131 bits (330), Expect = 8.560e-30 Identity = 61/80 (76.25%), Postives = 70/80 (87.50%), Query Frame = 3
Query: 255 GSASGRSSLVWGLDLGNDNIVMAIASRNGVDVVTNDVSGRQTPSAIYFAGDHRLIGEHSAGHAGSNPRNLINHLKYLLQD 494
G +GR LVWGLDLGNDNIVMA+ASR GVDVV NDVSGRQTP+A+YFAGDHRLIGEH+ GHAGS+P NL++HLK LL +
Sbjct: 23 GPPAGRRPLVWGLDLGNDNIVMAVASRTGVDVVANDVSGRQTPTAVYFAGDHRLIGEHTTGHAGSDPSNLVHHLKSLLSN 102
BLAST of mRNA_H-paniculata_contig5766.13346.1 vs. uniprot
Match: D7G638_ECTSI (Weakly similar to heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G638_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 1.600e-18 Identity = 44/57 (77.19%), Postives = 51/57 (89.47%), Query Frame = 3
Query: 318 MAIASRNGVDVVTNDVSGRQTPSAIYFAGDHRLIGEHSAGHAGSNPRNLINHLKYLL 488
MA+ASR GVDVV NDVSGRQTP+A+YFAGDHRLIGEH+ GHAG +P NL++HLK LL
Sbjct: 1 MAVASRTGVDVVANDVSGRQTPTAVYFAGDHRLIGEHTTGHAGGDPSNLVHHLKSLL 57
BLAST of mRNA_H-paniculata_contig5766.13346.1 vs. uniprot
Match: A0A7S4ULR9_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4ULR9_GUITH) HSP 1 Score: 64.7 bits (156), Expect = 1.840e-9 Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 3
Query: 270 RSSLVWGLDLGNDNIVMAIASRNGVDVVTNDVSGRQTPSAIYFAGDHRLIGEHSAGHAGSNPRNLINHLKYLLQDR 497
R WGLD GN N V+AIA + G+DV+ N+ S R+TP + G R +G+ + SN +N + LK L+ R
Sbjct: 11 RMGFPWGLDFGNQNCVIAIARKGGIDVIDNEASSRKTPCMVGLGGKERSLGQAAVAKINSNIKNTASELKRLIARR 86
BLAST of mRNA_H-paniculata_contig5766.13346.1 vs. uniprot
Match: J8TQW6_SACK1 (SSE2-like protein n=1 Tax=Saccharomyces kudriavzevii (strain ATCC MYA-4449 / AS 2.2408 / CBS 8840 / NBRC 1802 / NCYC 2889) TaxID=226230 RepID=J8TQW6_SACK1) HSP 1 Score: 64.3 bits (155), Expect = 5.230e-9 Identity = 30/71 (42.25%), Postives = 45/71 (63.38%), Query Frame = 3
Query: 276 SLVWGLDLGNDNIVMAIASRNGVDVVTNDVSGRQTPSAIYFAGDHRLIGEHSAGHAGSNPRNLINHLKYLL 488
S +GLDLGN+N V+A+A G+D+V N+VS R TPS + F +R +GE SN +N + +LK ++
Sbjct: 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRCTPSLVGFGSQNRYLGESGKTKQTSNVKNTVENLKRII 72
BLAST of mRNA_H-paniculata_contig5766.13346.1 vs. uniprot
Match: W0T4W1_KLUMD (Heat shock protein homolog SSE1 n=4 Tax=Kluyveromyces TaxID=4910 RepID=W0T4W1_KLUMD) HSP 1 Score: 67.0 bits (162), Expect = 2.250e-8 Identity = 30/71 (42.25%), Postives = 47/71 (66.20%), Query Frame = 3
Query: 276 SLVWGLDLGNDNIVMAIASRNGVDVVTNDVSGRQTPSAIYFAGDHRLIGEHSAGHAGSNPRNLINHLKYLL 488
S+ +GLDLGN+N V+A+A G+DVV N+VS R TP+ + F +R +GE SN +N +++LK ++
Sbjct: 2 SIPFGLDLGNNNAVLAVARNRGIDVVVNEVSNRSTPALVSFGPKNRFVGESGKNKQTSNIKNTVDNLKRII 72
BLAST of mRNA_H-paniculata_contig5766.13346.1 vs. uniprot
Match: A0A1L0BR22_9ASCO (CIC11C00000000437 n=2 Tax=[Candida] intermedia TaxID=45354 RepID=A0A1L0BR22_9ASCO) HSP 1 Score: 66.6 bits (161), Expect = 2.980e-8 Identity = 30/71 (42.25%), Postives = 47/71 (66.20%), Query Frame = 3
Query: 276 SLVWGLDLGNDNIVMAIASRNGVDVVTNDVSGRQTPSAIYFAGDHRLIGEHSAGHAGSNPRNLINHLKYLL 488
S+ +G+DLGNDN V+A A G+D++ N+VS R TPS + F +R IGE + SN +N +++LK ++
Sbjct: 2 SVPFGVDLGNDNTVIACARNRGIDIIVNEVSNRSTPSLVGFGSKNRFIGEAAKNQQTSNIKNTVDNLKRIV 72
BLAST of mRNA_H-paniculata_contig5766.13346.1 vs. uniprot
Match: A0A875S8K7_EENNA (Adenyl-nucleotide exchange factor sse1 n=1 Tax=Eeniella nana TaxID=13502 RepID=A0A875S8K7_EENNA) HSP 1 Score: 66.6 bits (161), Expect = 3.060e-8 Identity = 32/72 (44.44%), Postives = 48/72 (66.67%), Query Frame = 3
Query: 273 SSLVWGLDLGNDNIVMAIASRNGVDVVTNDVSGRQTPSAIYFAGDHRLIGEHSAGHAGSNPRNLINHLKYLL 488
+++ +G+DLGN++ V+A+A G+D+V NDVS R TPS + F +R IGE SN +N I++LK LL
Sbjct: 3 ATIPFGVDLGNNSSVVAVARNRGIDIVVNDVSNRSTPSVVGFGRKNRAIGEAGENQKTSNLKNTISNLKRLL 74
BLAST of mRNA_H-paniculata_contig5766.13346.1 vs. uniprot
Match: C4Y1D4_CLAL4 (Uncharacterized protein n=2 Tax=Clavispora lusitaniae TaxID=36911 RepID=C4Y1D4_CLAL4) HSP 1 Score: 66.2 bits (160), Expect = 3.960e-8 Identity = 31/71 (43.66%), Postives = 46/71 (64.79%), Query Frame = 3
Query: 276 SLVWGLDLGNDNIVMAIASRNGVDVVTNDVSGRQTPSAIYFAGDHRLIGEHSAGHAGSNPRNLINHLKYLL 488
S +G+DLGNDN V+A A G+D++ N+VS R TPS + F +R IGE + SN +N +++LK +L
Sbjct: 2 STPFGVDLGNDNTVIACARNRGIDIIVNEVSNRSTPSLVGFGMKNRFIGESAKNQQTSNIKNTVDNLKRIL 72
BLAST of mRNA_H-paniculata_contig5766.13346.1 vs. uniprot
Match: A0A8H6BIU8_DEKBR (Adenyl-nucleotide exchange factor n=3 Tax=Dekkera bruxellensis TaxID=5007 RepID=A0A8H6BIU8_DEKBR) HSP 1 Score: 66.2 bits (160), Expect = 4.050e-8 Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 3
Query: 273 SSLVWGLDLGNDNIVMAIASRNGVDVVTNDVSGRQTPSAIYFAGDHRLIGEHSAGHAGSNPRNLINHLKYLL 488
+S+ +G+DLGN++ V+A+A G+D+V N+VS R TPS + F +R IGE SN +N I +LK LL
Sbjct: 3 ASIPFGVDLGNNSSVIAVARNRGIDIVVNEVSSRSTPSVVGFGRKNRAIGESGENQRNSNLKNTIANLKRLL 74
BLAST of mRNA_H-paniculata_contig5766.13346.1 vs. uniprot
Match: A0A1E4SPD1_9ASCO (Heat shock protein of HSP70 family n=1 Tax=Suhomyces tanzawaensis NRRL Y-17324 TaxID=984487 RepID=A0A1E4SPD1_9ASCO) HSP 1 Score: 65.9 bits (159), Expect = 5.290e-8 Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 3
Query: 276 SLVWGLDLGNDNIVMAIASRNGVDVVTNDVSGRQTPSAIYFAGDHRLIGEHSAGHAGSNPRNLINHLKYLL 488
S +G+DLGNDN V+A A G+D++ N+VS R TPS I F +R IGE SN +N +++LK +L
Sbjct: 2 STPFGVDLGNDNTVIACARNRGIDIIVNEVSNRSTPSLIGFGPRNRFIGESGKNQQTSNLKNSVDNLKRIL 72 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5766.13346.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5766.13346.1 >prot_H-paniculata_contig5766.13346.1 ID=prot_H-paniculata_contig5766.13346.1|Name=mRNA_H-paniculata_contig5766.13346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=314bp MFWICLGIVGLTLQLPLLGVAAARAGSASGRSSLVWGLDLGNDNIVMAIAback to top mRNA from alignment at H-paniculata_contig5766:1130..3047+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5766.13346.1 ID=mRNA_H-paniculata_contig5766.13346.1|Name=mRNA_H-paniculata_contig5766.13346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1918bp|location=Sequence derived from alignment at H-paniculata_contig5766:1130..3047+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5766:1130..3047+ >mRNA_H-paniculata_contig5766.13346.1 ID=mRNA_H-paniculata_contig5766.13346.1|Name=mRNA_H-paniculata_contig5766.13346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1884bp|location=Sequence derived from alignment at H-paniculata_contig5766:1130..3047+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |