prot_H-paniculata_contig5757.13327.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5757.13327.1
Unique Nameprot_H-paniculata_contig5757.13327.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length227
Homology
BLAST of mRNA_H-paniculata_contig5757.13327.1 vs. uniprot
Match: A0A177TL22_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TL22_9BASI)

HSP 1 Score: 89.7 bits (221), Expect = 5.630e-17
Identity = 57/152 (37.50%), Postives = 76/152 (50.00%), Query Frame = 0
Query:  105 QQLGALVDNRTWESEDLGRLPAGRKAIRMKWIFK---------------------------DFFETSAAVARTSTLRTVFSLAAE----LEGMDVDAAYLNAPVEEEPFVKLPPEFSPFSRDIPFVRRLRQSLYGLRQSGRNWNNTLTISLL 225
            +Q+ ALV   TW   DL  LPAGRKAI  +W++K                           D+FET A VAR  +LR + +LAA     +  +DV  AYLN  +EEE +++ PP +     +   V RLR  LYGL+QSGR WN      L+
Sbjct:  654 EQMNALVGMHTW---DLVELPAGRKAIGSRWVYKLKLNEDGMADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVDVVTAYLNGDLEEEVYIRQPPGYEKKGPNRNLVCRLRLPLYGLKQSGRQWNTKFHKQLI 802          
BLAST of mRNA_H-paniculata_contig5757.13327.1 vs. uniprot
Match: A0A177U0N4_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U0N4_9BASI)

HSP 1 Score: 89.4 bits (220), Expect = 7.640e-17
Identity = 56/144 (38.89%), Postives = 74/144 (51.39%), Query Frame = 0
Query:  105 QQLGALVDNRTWESEDLGRLPAGRKAIRMKWIFK---------------------------DFFETSAAVARTSTLRTVFSLAAE----LEGMDVDAAYLNAPVEEEPFVKLPPEFSPFSRDIPFVRRLRQSLYGLRQSGRNWN 217
            +Q+ ALV   TW   DL  LPAGRKAI  +W++K                           D+FET A VAR  +LR + +LAA     +  +DV  AYLN  +EEE +++ PP +     +   V RLR  LYGL+QSGR WN
Sbjct:  655 EQMNALVGMHTW---DLVELPAGRKAIGSRWVYKLKLNEDGMADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVDVVTAYLNGDLEEEVYIRQPPGYEKGGPNKNLVCRLRLPLYGLKQSGRQWN 795          
BLAST of mRNA_H-paniculata_contig5757.13327.1 vs. uniprot
Match: A0A328L1K5_9BACI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Bacillus sp. SRB_331 TaxID=1969379 RepID=A0A328L1K5_9BACI)

HSP 1 Score: 80.5 bits (197), Expect = 2.370e-14
Identity = 54/148 (36.49%), Postives = 78/148 (52.70%), Query Frame = 0
Query:  106 QLGALVDNRTWESEDLGRLPAGRKAIRMKWIFK---------------------------DFFETSAAVARTSTLRTVFSLAAELE----GMDVDAAYLNAPVEEEPFVKLPPEFSPFSRDIPFVRRLRQSLYGLRQSGRNWNNTLTI 222
            +  +L  N+TWE   L RLP+GR AI+ KW+FK                           DF ET + VA  +++R VF+LAA L+     +DV  A+L A + EE ++  P  +   S D   V RL++SLYGL+Q+G  WNNT+ +
Sbjct:  135 EFDSLQHNKTWE---LVRLPSGRNAIQNKWVFKVKSDEKGLVNKFKARLVVKGYSQRPGIDFDETFSPVAHLASVRLVFALAASLKLKLRQLDVVGAFLQAELHEEIYMVQPKGY--ISHDPSLVCRLKKSLYGLKQAGLVWNNTINL 277          
BLAST of mRNA_H-paniculata_contig5757.13327.1 vs. uniprot
Match: A0A328KU84_9BACI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Bacillus sp. SRB_8 TaxID=1969377 RepID=A0A328KU84_9BACI)

HSP 1 Score: 80.5 bits (197), Expect = 2.690e-14
Identity = 54/148 (36.49%), Postives = 78/148 (52.70%), Query Frame = 0
Query:  106 QLGALVDNRTWESEDLGRLPAGRKAIRMKWIFK---------------------------DFFETSAAVARTSTLRTVFSLAAELE----GMDVDAAYLNAPVEEEPFVKLPPEFSPFSRDIPFVRRLRQSLYGLRQSGRNWNNTLTI 222
            +  +L  N+TWE   L RLP+GR AI+ KW+FK                           DF ET + VA  +++R VF+LAA L+     +DV  A+L A + EE ++  P  +   S D   V RL++SLYGL+Q+G  WNNT+ +
Sbjct:   47 EFDSLQHNKTWE---LVRLPSGRNAIQNKWVFKVKSDEKGLVNKFKARLVVKGYSQRPGIDFDETFSPVAHLASVRLVFALAASLKLKLRQLDVVGAFLQAELHEEIYMVQPKGY--ISHDPSLVCRLKKSLYGLKQAGLVWNNTINL 189          
BLAST of mRNA_H-paniculata_contig5757.13327.1 vs. uniprot
Match: A0A177TV96_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TV96_9BASI)

HSP 1 Score: 79.7 bits (195), Expect = 1.560e-13
Identity = 50/152 (32.89%), Postives = 79/152 (51.97%), Query Frame = 0
Query:  105 QQLGALVDNRTWESEDLGRLPAGRKAIRMKWIFK---------------------------DFFETSAAVARTSTLRTVFSLAAELE----GMDVDAAYLNAPVEEEPFVKLPPEFSPFSRDIPFVRRLRQSLYGLRQSGRNWNNTLTISLL 225
            +++G+LV+ +TWE   L  LP GR  +  +W++K                           DF +T A VAR ST+R + SLA  L      +D+  AYLN  ++EE +++ PPE+   +  +  +RR   ++YGL+Q+GR W +TL   LL
Sbjct:  714 EEIGSLVEMKTWE---LVELPKGRDVVGSRWVYKLKLDRDGRASRYKGRLVAQGFTQRDGIDFSDTFAPVARLSTIRIIISLALALSLNLGSIDIKTAYLNGKLQEEVYMQQPPEYDDGTGRVCLLRR---AIYGLKQAGRAWFDTLKGKLL 859          
BLAST of mRNA_H-paniculata_contig5757.13327.1 vs. uniprot
Match: A0A8H6Z6T5_9AGAR (Polyprotein n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H6Z6T5_9AGAR)

HSP 1 Score: 78.6 bits (192), Expect = 3.860e-13
Identity = 53/137 (38.69%), Postives = 69/137 (50.36%), Query Frame = 0
Query:  115 TWESEDLGRLPAGRKAIRMKWIFK---------------------------DFFETSAAVARTSTLRTVFSLAA----ELEGMDVDAAYLNAPVEEEPFVKLPPEFSPFSRDIPFVRRLRQSLYGLRQSGRNWNNTL 220
            TW   DL  LPAGRKAI  KW+++                           DF ET +   R  T R + +LAA    ++ G+DV AAYLN  +EE  ++K PP+F         V +L+ S+YGLRQSGRNWN  L
Sbjct:  725 TW---DLVELPAGRKAIASKWVWRRKRDATGKVAKHKARLVADGSRQIPGIDFHETYSPTIRLETFRFLLALAARYQLKVHGIDVVAAYLNGKLEETVYMKQPPDFDD---GTGCVCKLKLSIYGLRQSGRNWNQKL 855          
BLAST of mRNA_H-paniculata_contig5757.13327.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA)

HSP 1 Score: 77.4 bits (189), Expect = 9.720e-13
Identity = 50/147 (34.01%), Postives = 78/147 (53.06%), Query Frame = 0
Query:  106 QLGALVDNRTWESEDLGRLPAGRKAIRMKWIFK---------------------------DFFETSAAVARTSTLRTVFSLAAE----LEGMDVDAAYLNAPVEEEPFVKLPPEFSPFSRDIPF-VRRLRQSLYGLRQSGRNWNNTL 220
            +  AL+ N TW   DL   PAG K I  KW+F+                           +++ET + V R  T+R +F++AAE    +  +D+  AYLN+ ++EE +++ P  F   S + P  V +L++++YGL+QSGR WNNTL
Sbjct:  840 EYNALLSNDTWSLVDL---PAGAKTIGSKWVFRIKRDKNGEIERFKSRLVAKGCGQQFGVNYWETFSPVIRYETIRMLFAIAAEKQLFMHQIDISNAYLNSSLDEEVYMRQPQNF--ISTEHPNKVLKLKKAIYGLKQSGRAWNNTL 981          
BLAST of mRNA_H-paniculata_contig5757.13327.1 vs. uniprot
Match: A0A0A1X768_ZEUCU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1X768_ZEUCU)

HSP 1 Score: 77.0 bits (188), Expect = 1.310e-12
Identity = 49/150 (32.67%), Postives = 78/150 (52.00%), Query Frame = 0
Query:  106 QLGALVDNRTWESEDLGRLPAGRKAIRMKWIFK---------------------------DFFETSAAVARTSTLRTVFSLAAE----LEGMDVDAAYLNAPVEEEPFVKLPPEFSPFSRDIPFVRRLRQSLYGLRQSGRNWNNTLTISL 224
            +  ALV N TW + DL   P G+K I  KW+F+                           +++ET + V R  T+R + ++A E    L  +D+  AYLN+ + EE +++ P  F   S++   V +L +++YGL+QSGR WN+TL I+L
Sbjct:  811 EYAALVANNTWSAVDL---PRGQKVIGSKWVFRIKRNPDGNIEKFKSRLVAKGCSQQLGLNYWETFSPVIRYETIRMLLAIAVEKELHLHQIDISNAYLNSDLTEEVYIRQPEGFID-SKNPDKVLKLNKAIYGLKQSGREWNSTLDIAL 956          
BLAST of mRNA_H-paniculata_contig5757.13327.1 vs. uniprot
Match: A0A4C1SXU4_EUMVA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1SXU4_EUMVA)

HSP 1 Score: 75.9 bits (185), Expect = 3.050e-12
Identity = 51/140 (36.43%), Postives = 70/140 (50.00%), Query Frame = 0
Query:  109 ALVDNRTWESEDLGRLPAGRKAIRMKWIFK---------------------------DFFETSAAVARTSTLRTVFSLAAE----LEGMDVDAAYLNAPVEEEPFVKLPPEFSPFSRDIPFVRRLRQSLYGLRQSGRNWN 217
            AL +N TW    L  LP G+KAI  KW+F                            DF +T + V R STLR + +LA +    L  MDVD AYLN+ + +E ++K PP F   +     V RL +++YGL+QSG+ WN
Sbjct:  521 ALENNSTWS---LANLPEGKKAIPCKWVFALKRDVNGEIERYKARLVAKGCNQRFGIDFTDTFSPVVRYSTLRLLLALAVKNKMHLHQMDVDTAYLNSDLHDEIYLKQPPHFVDETSPRK-VLRLHKAIYGLKQSGKEWN 656          
BLAST of mRNA_H-paniculata_contig5757.13327.1 vs. uniprot
Match: W8AQS8_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8AQS8_CERCA)

HSP 1 Score: 75.5 bits (184), Expect = 3.400e-12
Identity = 54/147 (36.73%), Postives = 75/147 (51.02%), Query Frame = 0
Query:  109 ALVDNRTWESEDLGRLPAGRKAIRMKWIF-----KD----------------------FFETSAAVARTSTLRTVFSLAAE----LEGMDVDAAYLNAPVEEEPFVKLPPEFSPFSRDIPFVRRLRQSLYGLRQSGRNWNNTLTISL 224
            AL+ N+TWE   L  LP G+K +R KWIF     KD                      + ET + V R +T+R +F+LAAE    L  MDV  AYLN+ + E+ ++   PE     R   +  +L+++LYGL+QSGR WN  L   L
Sbjct:   34 ALLKNKTWE---LAELPKGQKRVRNKWIFAIKRNKDGNVERFKARLVAKGCSQVYGVNYTETFSPVVRYNTIRMIFALAAEYGLHLHQMDVSTAYLNSELVEDIYM-CQPEMFVDQRFPDYCLKLKKALYGLKQSGRQWNIKLDTIL 176          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5757.13327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A177TL22_9BASI5.630e-1737.50Integrase catalytic domain-containing protein n=1 ... [more]
A0A177U0N4_9BASI7.640e-1738.89Integrase catalytic domain-containing protein n=2 ... [more]
A0A328L1K5_9BACI2.370e-1436.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A328KU84_9BACI2.690e-1436.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177TV96_9BASI1.560e-1332.89Integrase catalytic domain-containing protein n=1 ... [more]
A0A8H6Z6T5_9AGAR3.860e-1338.69Polyprotein n=1 Tax=Mycena venus TaxID=2733690 Rep... [more]
W8BWJ0_CERCA9.720e-1334.01Retrovirus-related Pol polyprotein from transposon... [more]
A0A0A1X768_ZEUCU1.310e-1232.67Retrovirus-related Pol polyprotein from transposon... [more]
A0A4C1SXU4_EUMVA3.050e-1236.43Retrovirus-related Pol polyprotein from transposon... [more]
W8AQS8_CERCA3.400e-1236.73Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 139..223
e-value: 3.0E-14
score: 53.2
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 104..224
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 104..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5757contigH-paniculata_contig5757:11089..11970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5757.13327.1mRNA_H-paniculata_contig5757.13327.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5757 10828..12730 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5757.13327.1 ID=prot_H-paniculata_contig5757.13327.1|Name=mRNA_H-paniculata_contig5757.13327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=227bp
MEDLFSTPPVTPAVTRSRAQGEQGSGTNTEDRTSASQMPPILPTHSRPAA
SASPLSVLSDGDDGENNGNSKVKDAEPSVEDAPSAGTAAPASRGNITKQS
GTEAQQLGALVDNRTWESEDLGRLPAGRKAIRMKWIFKDFFETSAAVART
STLRTVFSLAAELEGMDVDAAYLNAPVEEEPFVKLPPEFSPFSRDIPFVR
RLRQSLYGLRQSGRNWNNTLTISLLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like