prot_H-paniculata_contig5755.13323.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig5755.13323.1
Unique Name	prot_H-paniculata_contig5755.13323.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	206

Homology

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BLAST of mRNA_H-paniculata_contig5755.13323.1 vs. uniprot
Match: D7FMQ4_ECTSI (Rab6, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ4_ECTSI)

HSP 1 Score: 369 bits (947), Expect = 2.230e-128
Identity = 189/197 (95.94%), Postives = 192/197 (97.46%), Query Frame = 0

Query:   11 ENGSTPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGDDVIMMLVGNKTDLKERRQVSVEEGGDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSN-ANLIDIKV 206
            ENG  PAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERG+DV+MMLVGNKTDLKERRQVSVEEG DRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAP TSN ANLIDIK+
Sbjct:    6 ENGGAPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPATSNNANLIDIKL 202

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BLAST of mRNA_H-paniculata_contig5755.13323.1 vs. uniprot
Match: A0A6V1RZC8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RZC8_HETAK)

HSP 1 Score: 341 bits (875), Expect = 5.350e-117
Identity = 170/197 (86.29%), Postives = 183/197 (92.89%), Query Frame = 0

Query:   10 RENGSTPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGDDVIMMLVGNKTDLKERRQVSVEEGGDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 206
            R    TP VPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVR+ERG+DV++MLVGNKTDL +RRQVS EEGGDRA+AEG++F E SAK G N+K +FR+LA ALPGME+AP TSNANLIDIK+
Sbjct:   29 RAASMTPGVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRSERGNDVVIMLVGNKTDLADRRQVSAEEGGDRAQAEGVIFAEASAKSGANVKGVFRQLAAALPGMESAPTTSNANLIDIKL 225

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BLAST of mRNA_H-paniculata_contig5755.13323.1 vs. uniprot
Match: A0A7S2UZT5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZT5_9STRA)

HSP 1 Score: 333 bits (853), Expect = 6.180e-114
Identity = 167/199 (83.92%), Postives = 183/199 (91.96%), Query Frame = 0

Query:    9 DRENGSTPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGDDVIMMLVGNKTDLKERRQVSVEEGGDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGME-TAPVTSNANLIDIKV 206
            D ++  +P VPQI PLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMY+ DRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKW+EDVRNERG+DV++MLVGNKTDL +RRQVSVEEG +RAK+E IMFIETSAK GYN+KALF KLATALPGM+ T P+  N N+IDIK+
Sbjct:    9 DGQSLVSPGVPQITPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYMPDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWVEDVRNERGNDVVIMLVGNKTDLSDRRQVSVEEGEERAKSEQIMFIETSAKAGYNVKALFNKLATALPGMDATQPLAPNTNMIDIKL 207

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BLAST of mRNA_H-paniculata_contig5755.13323.1 vs. uniprot
Match: A0A836CM24_9STRA (Rab6, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM24_9STRA)

HSP 1 Score: 330 bits (847), Expect = 4.110e-113
Identity = 163/189 (86.24%), Postives = 181/189 (95.77%), Query Frame = 0

Query:   18 VPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGDDVIMMLVGNKTDLKERRQVSVEEGGDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 206
            +PQ+APLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLN+S+WI+DVR ERG++V++MLVGNKTDL +RRQVSVEEG D+AK EG+M IETSAK GYNIK LFRKLATALPGME+AP T+++NLIDIK+
Sbjct:   16 IPQVAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNSSEWIKDVRAERGNEVVIMLVGNKTDLADRRQVSVEEGEDKAKKEGVMHIETSAKAGYNIKPLFRKLATALPGMESAPSTASSNLIDIKL 204

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BLAST of mRNA_H-paniculata_contig5755.13323.1 vs. uniprot
Match: K3WVM7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVM7_GLOUD)

HSP 1 Score: 326 bits (835), Expect = 4.820e-111
Identity = 160/193 (82.90%), Postives = 176/193 (91.19%), Query Frame = 0

Query:   14 STPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGDDVIMMLVGNKTDLKERRQVSVEEGGDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 206
            +T +VPQIAPLAKYKLVFLGDQ VGKTS+ITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKWIEDVR ERG DV++MLVGNKTD+ ERRQVS+EEG D+AK E +MFIETSAK GYNIKALFRKLAT LPGME   ++ ++NLIDIK+
Sbjct:   27 NTVSVPQIAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISERRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTAISGDSNLIDIKL 219

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BLAST of mRNA_H-paniculata_contig5755.13323.1 vs. uniprot
Match: A0A0P1AX93_PLAHL (Rab family gtpase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AX93_PLAHL)

HSP 1 Score: 323 bits (827), Expect = 1.050e-109
Identity = 158/189 (83.60%), Postives = 173/189 (91.53%), Query Frame = 0

Query:   18 VPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGDDVIMMLVGNKTDLKERRQVSVEEGGDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 206
            VPQIAPLAKYKLVFLGDQ VGKTS+ITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKWIEDVR ERG DV++MLVGNKTD+ +RRQVS+EEG D+AK E +M+IETSAK GYNIKALFRKLAT LPGME   +T ++NLIDIK+
Sbjct:   39 VPQIAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVVMLVGNKTDISDRRQVSIEEGSDKAKEENVMYIETSAKAGYNIKALFRKLATVLPGMENTMITGDSNLIDIKL 227

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BLAST of mRNA_H-paniculata_contig5755.13323.1 vs. uniprot
Match: A0A4D9D1C8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1C8_9STRA)

HSP 1 Score: 322 bits (825), Expect = 1.060e-109
Identity = 161/193 (83.42%), Postives = 176/193 (91.19%), Query Frame = 0

Query:   14 STPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGDDVIMMLVGNKTDLKERRQVSVEEGGDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 206
            S  ++PQI  LAKYKLVFLGDQ VGKTSIITRFMYD F+KNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKW++DVRNERG+DVI+MLVGNKTDL +RRQVS EEG D+AK + IMFIETSAK G+NIK LFRKLATALPGME+A    +ANLIDIK+
Sbjct:   12 SPASLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVDDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQDNIMFIETSAKAGFNIKPLFRKLATALPGMESAQTQGSANLIDIKL 204

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BLAST of mRNA_H-paniculata_contig5755.13323.1 vs. uniprot
Match: A0A5D6XJX8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJX8_9STRA)

HSP 1 Score: 322 bits (826), Expect = 1.390e-109
Identity = 157/190 (82.63%), Postives = 173/190 (91.05%), Query Frame = 0

Query:   17 AVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGDDVIMMLVGNKTDLKERRQVSVEEGGDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 206
            +VPQIAPLAKYKLVFLGDQ VGKTS+ITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+ YDITNRASFLNTSKWIEDVR ERG DV++MLVGNKTD+ +RRQVS+EEG D+AK E +MFIETSAK GYNIKALFRKLAT LPGME   ++ ++NLIDIK+
Sbjct:   36 SVPQIAPLAKYKLVFLGDQGVGKTSVITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVAYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISDRRQVSIEEGADKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTAISGDSNLIDIKL 225

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BLAST of mRNA_H-paniculata_contig5755.13323.1 vs. uniprot
Match: A0A8K1CRQ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRQ3_PYTOL)

HSP 1 Score: 322 bits (825), Expect = 1.910e-109
Identity = 158/194 (81.44%), Postives = 174/194 (89.69%), Query Frame = 0

Query:   13 GSTPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGDDVIMMLVGNKTDLKERRQVSVEEGGDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 206
            G +  VPQIAPLAKYKLVFLGDQ VGKTSIITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+ YDITNRASFLNTSKWIEDVR ERG DV++MLVGNKTD+ +RRQVS+EEG D+AK E +MFIETSAK G+NIKALFRKLAT LPGME   ++ ++NLIDIK+
Sbjct:   31 GGSVTVPQIAPLAKYKLVFLGDQGVGKTSIITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVAYDITNRASFLNTSKWIEDVRAERGQDVVIMLVGNKTDISDRRQVSIEEGADKAKEENVMFIETSAKAGFNIKALFRKLATVLPGMENTAISGDSNLIDIKL 224

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BLAST of mRNA_H-paniculata_contig5755.13323.1 vs. uniprot
Match: W2LJW2_PHYPR (Uncharacterized protein n=20 Tax=Phytophthora TaxID=4783 RepID=W2LJW2_PHYPR)

HSP 1 Score: 322 bits (826), Expect = 3.070e-109
Identity = 158/189 (83.60%), Postives = 173/189 (91.53%), Query Frame = 0

Query:   18 VPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGDDVIMMLVGNKTDLKERRQVSVEEGGDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 206
            VPQIAPLAKYKLVFLGDQ VGKTS+ITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKWIEDVR ERG DV++MLVGNKTD+ +RRQVS+EEG D+AK E +MFIETSAK GYNIKALFRKLAT LPGME   ++ ++NLIDIK+
Sbjct:   60 VPQIAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISDRRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTMISGDSNLIDIKL 248

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5755.13323.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5755.13323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FMQ4_ECTSI	2.230e-128	95.94	Rab6, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6V1RZC8_HETAK	5.350e-117	86.29	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2UZT5_9STRA	6.180e-114	83.92	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A836CM24_9STRA	4.110e-113	86.24	Rab6, rab family GTPase n=1 Tax=Tribonema minus Ta...	[more]
K3WVM7_GLOUD	4.820e-111	82.90	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A0P1AX93_PLAHL	1.050e-109	83.60	Rab family gtpase n=1 Tax=Plasmopara halstedii Tax...	[more]
A0A4D9D1C8_9STRA	1.060e-109	83.42	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A5D6XJX8_9STRA	1.390e-109	82.63	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A8K1CRQ3_PYTOL	1.910e-109	81.44	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
W2LJW2_PHYPR	3.070e-109	83.60	Uncharacterized protein n=20 Tax=Phytophthora TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 50..66 score: 33.13 coord: 130..143 score: 52.55 coord: 27..48 score: 41.61 coord: 165..187 score: 36.91 coord: 68..90 score: 48.05
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 29..189 e-value: 2.9E-12 score: 37.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 27..190 e-value: 3.7E-84 score: 295.6
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 24..190 e-value: 1.8E-32 score: 123.8
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 32..204 e-value: 1.2E-5 score: 30.8
None	No IPR available	GENE3D	3.40.50.300		coord: 20..191 e-value: 4.7E-63 score: 213.8
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 22..192
None	No IPR available	PANTHER	PTHR24073:SF1036		coord: 22..192
None	No IPR available	PROSITE	PS51419	RAB	coord: 7..206 score: 31.239
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 28..186 e-value: 7.8E-58 score: 194.6
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 26..182 e-value: 1.7E-28 score: 97.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 26..191

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5755	contig	H-paniculata_contig5755:377..4012 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5755.13323.1	mRNA_H-paniculata_contig5755.13323.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig5755 377..4012 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig5755.13323.1 ID=prot_H-paniculata_contig5755.13323.1|Name=mRNA_H-paniculata_contig5755.13323.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=206bp
MFVYNDKYDRENGSTPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDN
FDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSS
VAVIVYDITNRASFLNTSKWIEDVRNERGDDVIMMLVGNKTDLKERRQVS
VEEGGDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNAN
LIDIKV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase