mRNA_H-paniculata_contig5754.13321.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5754.13321.1
Unique NamemRNA_H-paniculata_contig5754.13321.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5754.13321.1 vs. uniprot
Match: D8LFS5_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS5_ECTSI)

HSP 1 Score: 508 bits (1308), Expect = 1.030e-166
Identity = 281/472 (59.53%), Postives = 349/472 (73.94%), Query Frame = 2
Query:   77 PHNEGG---FEMTIGSRKSVSGTRGTAAVGQLGLEDAPANDQETIYASGTSSTAGAVANFLNSIVGAGIVGLPFALAQSGLWAGMFMICLAAFLTHHATTMLISAGEKANRLNYEELMAQVFGITGFHLFNFFAGVLAFGAMTAYLIVIGDTVTEIALASGTSS-LFTNRVSVVSMLGTLVILPVASLKDLAKLSYTSFVSVIADVLLVCLVVWNGPTESDDVPGIDRSETLQFIRPTIFAGFGAMSFAFVCQSSSFLVYRSMAVRGVEKWNQVSRVAVSAATAMGLALSFAGYASFVNKTEGNILNNFSTDHKAANVARGFLAVTMILTYPIEMYVARHVLDASVFQTVLGLGPITSVRHYGITLGLWFLSMMLAASTNSLGDIMEIFGAFAASMIGYVMPAMLYIQINRAQLRAAKAKWRPGSPQYESSLLERLWAIRNFFLPFFMVVFGVIAMIAGVATAVITELSVTK 1480
            P N GG   FE+T  S        G  A    G+E A   D+   Y SG SS+AGAVANF+N+IVGAGIVG+PFA AQSGLWAG+FM+CLAA L   +TTMLI+AGEK  RLNYEELM   FG  G H+F  FAGVLAFGAM+AYLI++GDTV  IA ASG  +    +R SV+ ++G   +LP++ LKDL+KL+YTS +SV+ADVLL  +V+      + ++P +DRS+   FIRPTIFAGFGA+SF+FVCQ SSFLVYRSM+ RGV++W  V+R AVS A  M L L  AGY SF + TEGNILNNF+ +H+ A VAR FLA+TM+LTYP+EMYVARHVLDAS+FQT LG GPIT+VRHY IT+ +W L++ LA ST +LG ++EIFGAF AS IGYV+P +LY++    +LR AKA W   S +YE +L ERLWA RNF +P FMV+FGV+AM+AGV TAV+ ELS TK
Sbjct:    4 PENAGGEPDFELTARSD-------GVEASATSGVETA---DRFERYPSGNSSSAGAVANFVNTIVGAGIVGIPFATAQSGLWAGIFMLCLAALLNVKSTTMLITAGEKVGRLNYEELMEVYFGSAGTHVFTLFAGVLAFGAMSAYLIIVGDTVPMIAHASGIDTGALADRASVIGIVGVFCMLPLSLLKDLSKLAYTSCLSVLADVLLTVIVLVGASGAARELPDVDRSDVNTFIRPTIFAGFGAISFSFVCQHSSFLVYRSMSERGVDRWATVTRWAVSIALVMSLTLGVAGYLSFADGTEGNILNNFTHEHRPATVARAFLALTMVLTYPLEMYVARHVLDASLFQTCLGKGPITTVRHYWITVIIWVLTLTLALSTANLGSVLEIFGAFGASAIGYVLPPLLYMKSCGHELRQAKAAWDKDSSEYEPALTERLWASRNFIVPVFMVLFGVVAMVAGVVTAVVGELSHTK 465          
BLAST of mRNA_H-paniculata_contig5754.13321.1 vs. uniprot
Match: D8LFS4_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS4_ECTSI)

HSP 1 Score: 496 bits (1278), Expect = 3.120e-162
Identity = 255/427 (59.72%), Postives = 335/427 (78.45%), Query Frame = 2
Query:  203 YASGTSSTAGAVANFLNSIVGAGIVGLPFALAQSGLWAGMFMICLAAFLTHHATTMLISAGEKANRLNYEELMAQVFGITGFHLFNFFAGVLAFGAMTAYLIVIGDTVTEIALASGTSS-LFTNRVSVVSMLGTLVILPVASLKDLAKLSYTSFVSVIADVLLVCLVVWNGPTESDDVPGIDRSETLQFIRPTIFAGFGAMSFAFVCQSSSFLVYRSMAVRGVEKWNQVSRVAVSAATAMGLALSFAGYASFVNKTEGNILNNFSTDHKAANVARGFLAVTMILTYPIEMYVARHVLDASVFQTVLGLGPITSVRHYGITLGLWFLSMMLAASTNSLGDIMEIFGAFAASMIGYVMPAMLYIQINRAQLRAAKAKWRPGSPQYESSLLERLWAIRNFFLPFFMVVFGVIAMIAGVATAVITELSVTK 1480
            Y +G SS AGAV+NF+N+IVGAGI+GLPFALA+SGLWAG+F++CLAAFLT+ +T MLI+AGEK  RLNYEELMA  FG  G +L++FF  +L +GAM+AYLI++ DT+  IA ASGT++  F +R +V+ M G  V+LP++ LKDL+KL+YTS +SV+ADV L  +V + G  E+     ID SE   FIRPT+FAGFGA+SFAFV QS+SFLVYRSM+  GV++W  V+R +VS A  +GL L+ +GY +FVN+T+ NILNN  T H  AN+AR FLA+TM+ TYP+EMYVARH LD +VFQT LG GP T  RH+GI++ LW LS++LAAST +LG I+EIFGAF+A+ +GYVMPA+L+I+ NR +   A A W+ G+P+Y  +L ERLWA++NFF+P FMV FG++AM+AGVATAV +ELS TK
Sbjct:   40 YPAGNSSAAGAVSNFVNTIVGAGIIGLPFALAESGLWAGVFLLCLAAFLTNRSTNMLIAAGEKIGRLNYEELMADSFGNAGVYLYSFFVVLLGYGAMSAYLIIVADTIPAIAEASGTTNGPFADRHAVIFMFGIFVVLPLSLLKDLSKLAYTSGISVLADVFLTLIVFFAGAGEASTNDDIDSSERFVFIRPTVFAGFGAISFAFVSQSASFLVYRSMSKGGVDRWACVTRWSVSIALGLGLTLALSGYLNFVNETDANILNNLGTRHGPANIARAFLALTMVFTYPMEMYVARHALDVAVFQTWLGKGPTTQARHFGISIALWVLSIVLAASTKNLGSILEIFGAFSANAVGYVMPALLFIKSNREEFSRASAVWKKGTPEYHPALGERLWAMQNFFVPMFMVFFGILAMVAGVATAVASELSPTK 466          
BLAST of mRNA_H-paniculata_contig5754.13321.1 vs. uniprot
Match: A0A836CLI3_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLI3_9STRA)

HSP 1 Score: 357 bits (915), Expect = 2.170e-108
Identity = 209/463 (45.14%), Postives = 284/463 (61.34%), Query Frame = 2
Query:   80 HNEGGFEMTIGSRKSVSGTRGTAAVGQLGLEDAPANDQETIYASGTSSTAGAVANFLNSIVGAGIVGLPFALAQSGLWAGMFMICLAAFLTHHATTMLISAGEKANRLNYEELMAQVFGITGFHLFNFFAGVLAFGAMTAYLIVIGDTVTEIALASGTSS-LFTNRVSVVSMLGTLVILPVASLKDLAKLSYTSFVSVIADVLLVCLVVWNGPTESDDVPGIDRSETLQFIRPTIFAGFGAMSFAFVCQSSSFLVYRSMA--VRGVEKWNQVSRVAVSAATAMGLALSFAGYASFVNKTEGNILNNFSTDHKAANVARGFLAVTMILTYPIEMYVARHVLDASVFQTVLGLGPITSVRHYGITLGLWFLSMMLAASTNSLGDIMEIFGAFAASMIGYVMPAMLYIQINRAQLRAAKAKWRPGSPQYESSLLERLWAIRNFFLPFFMVVFGVIAMIAGVATAVI 1459
            H+ GG E ++   +         AVG      A ++D    Y  G S   GAV NF+N+IVGAGI+GLPFA+ Q G W G+ ++ LAA L   ++ ML+ AGEK  RLNYEELM  +FG  G+H F FFA V+AFGAM AYLI+IGDTV ++  A G +S   T+R  V+++L  LV+LPV+S +DL                     V+  P E      IDR++   F R T+FAG GA+SFAFVCQSS+F+VYRS+    R V  W  ++ +++S A AM +A++  GY SF ++T G+ILNNFS    AA  AR FLAV M+LTYP+EM VARHVLDASV + +L        RH  IT+ +W  + + A +T+ LG ++EIFGAFAAS+IGYV+P++LY++ +  +LRAA   W+     Y  S  ER  A R F+  FFM  FG +A +AG  T ++
Sbjct:   47 HDNGGVEFSVQPER--------VAVG------AGSDDVHNEYPEGHSGHWGAVFNFVNTIVGAGIIGLPFAILQCGFWTGLGLMTLAAVLIDKSSVMLVQAGEKTGRLNYEELMGAMFGAAGYHTFCFFAFVMAFGAMAAYLIIIGDTVPQVLRACGVASGALTDRRVVIALLSLLVVLPVSSFRDLHXXXXXXXXXXXXXXXXXXXXVFAAPAEGRTYDTIDRTDIFTFARGTLFAGLGAISFAFVCQSSTFIVYRSLGEGARSVASWTSITHMSLSIAWAMTMAMATLGYLSFGDQTRGDILNNFSARGAAAAAARAFLAVAMLLTYPMEMVVARHVLDASVCRALLRWEEARLGRHMVITILIWAATTVTALATDDLGAVLEIFGAFAASVIGYVLPSLLYLKSHEGELRAAALVWKGAGGAYAPSWRERAAAFRPFYWAFFMAAFGAVACVAGTVTTIL 495          
BLAST of mRNA_H-paniculata_contig5754.13321.1 vs. uniprot
Match: A0A2R5GEI9_9STRA (Amino acid transporter, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GEI9_9STRA)

HSP 1 Score: 296 bits (757), Expect = 1.760e-85
Identity = 175/440 (39.77%), Postives = 268/440 (60.91%), Query Frame = 2
Query:  170 EDAPANDQETIYASGTSSTAGAVANFLNSIVGAGIVGLPFALAQSGLWAGMFMICLAAFLTHHATTMLISAGEKANRLNYEELMAQVFGITGFHLFNFFAGVLAFGAMTAYLIVIGDTVTEIALASGTSSLF---TNRVSVVSMLGTLVILPVASLKDLAKLSYTSFVSVIADVLLVCLVVWNGPTESDDVPGIDRSET---LQFIRPTIFAGFGAMSFAFVCQSSSFLVYRSMAVRGVEKWNQVSRVAVSAATAMGLALSFAGYASFVNKTEGNILNNFSTDHKAANVARGFLAVTMILTYPIEMYVARHVLDA---SVFQTVLGLGPITSVRHYGITLGLWFLSMMLAASTNSLGDIMEIFGAFAASMIGYVMPAMLYIQINRAQLRAAKA--KWRPGSPQYESSLLERLWAIRNFFLPFFMVVFGVIAMIAGVATAV 1456
            +D   +D E I   G S   GA  NF+NSIVGAG++GLPFA+A+ G   G  ++ + A+ TH +   L+  G      +YE L    FG  GF + + F  + AFGAM AYL+++GDT+  +        LF   ++R  VV +   ++ILP++ L+D+A LS++S +S+ AD ++V LV+        + P  DR        F   +IFAGFGA+SFA+VCQ SSF+V+ ++ V    +W++V+  AVS A  M + LS AGY +F N+T  NILNNF  +   +NVAR  LA+TM+ T+P+E +VARH L A       T+ G   ++S  H+G+TLGLW ++ ++  +   LG I+E+ GA +ASM+G+++PAM + +++  ++   K+   W    P Y ++L  RL A+R+F++P FM+V G++AMIAG  TAV
Sbjct:   72 QDEGGDDDEVIP--GNSGKLGACFNFVNSIVGAGVIGLPFAVAECGFVMGFLLLLVVAYFTHFSVNTLVQLGVLVKERSYEGLCRHCFGKAGFAVVSLFMAIFAFGAMCAYLVIVGDTIPVVL-----DHLFGVQSDRRLVVFLFALVIILPLSLLRDMAALSWSSSLSITADGIIVLLVIARAAYGVSEWPEADRGPIEPEFTFANSSIFAGFGAISFAYVCQHSSFIVFNTLKVPTTREWDRVNTGAVSTAMIMSVLLSLAGYLAFFNQTLPNILNNFPCNDNVSNVARFLLALTMVFTFPMENFVARHSLFAIYHGFSPTLKGSRRMSSAWHFGLTLGLWGVATIIGVAVTDLGIIIELTGALSASMLGFILPAMCHFKVHSLRITWNKSIKAWDKDHPFYRTTLSGRLAALRDFWVPLFMLVVGIVAMIAGTYTAV 504          
BLAST of mRNA_H-paniculata_contig5754.13321.1 vs. uniprot
Match: A0A0G4IJK5_PLABS (Aa_trans domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IJK5_PLABS)

HSP 1 Score: 239 bits (611), Expect = 6.590e-66
Identity = 151/425 (35.53%), Postives = 250/425 (58.82%), Query Frame = 2
Query:  230 GAVANFLNSIVGAGIVGLPFALAQSGLWAGMFMICLAAFLTHHATTMLISAGEKANRLNYEELMAQVFGITGFHLFNFFAGVLAFGAMTAYLIVIGDTVTEIALAS-GTSSLFTNRVSVVSMLGTLVILPVASLKDLAKLSYTSFVSVIADVLLVCLVVWNGPTES-----DDVPGIDRSETLQFIRPTIFAGFGAMSFAFVCQSSSFLVYRSMAVRGVEKWNQVSRVAVSAATAMGLALSFAGYASFVNKTEGNILNNFSTDHKAANVARGFLAVTMILTYPIEMYVARHVLDASVFQTVLG--LGPITSVRHYGITLGLWFLSMMLAASTNSLGDIMEIFGAFAASMIGYVMPAMLYIQINRAQLRAAKAKWR--PGS-PQYESSLLERLWAIRNFFLPFFMVVFGVIAMIAGVATAVITELS 1471
            GA  NF NSIVGAGI+G+PFAL ++GL+ G  ++ L A+L+ +++ +L+S   K N  ++E     VFG  G++       + AFG M AYLI++G+T T +A A+ G  S+F +R  +V  +  + ILP++  ++++ LS+ S + + +  +++  V    P  +        P I++  ++  + PT+FAG GAMSFAFVC  +SF+V+ SM+    ++W  VS ++V  A  + LAL  AG  +F    + +ILNNF  D      AR  L V+M++TYP+EM+VARH L     +   G  +G  +  +H   +L LW  +M++A +    G ++E+ GA  AS +GY++P ++Y+ + +    A +A WR  P +  + E  L +RL+       P F+VVFG +A++AG +TA +T+L+
Sbjct:   34 GASFNFANSIVGAGIIGMPFALKRTGLYGGCLLLVLVAYLSMYSSRLLVSCAHKLNLKSFESTCRHVFGKAGYNCVLICMTLFAFGGMVAYLILVGNTFTRVAAAAFGDESIFADRHVIVLTVSVIFILPLSLARNISSLSHFSMLGLASVAVIIIAVALRAPDIAWHYFEGSEPIIEKYHSV--LEPTLFAGIGAMSFAFVCNHNSFIVFNSMSNPTPQRWRGVSAISVGFALVLSLALGLAGAINFGQFAQPDILNNFPEDDILIIAARIMLGVSMVMTYPMEMFVARHCL----LEVASGGEVGEPSFWKHAAASLFLWTSTMVIAITVPDFGVVLELTGALTASCLGYILPGLIYLSVVKFPADAIRA-WRVDPATGARGEPDLRKRLYETFKDIGPIFLVVFGAVALVAGTSTA-LTDLA 450          
BLAST of mRNA_H-paniculata_contig5754.13321.1 vs. uniprot
Match: A0A0H5QQI6_9EUKA (Aa_trans domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QQI6_9EUKA)

HSP 1 Score: 230 bits (586), Expect = 2.100e-62
Identity = 144/461 (31.24%), Postives = 249/461 (54.01%), Query Frame = 2
Query:   98 EMTIGSRKSVSGTRGTAAVGQLGLEDAPANDQETIYASGTSSTAGAVANFLNSIVGAGIVGLPFALAQSGLWAGMFMICLAAFLTHHATTMLISAGEKANRLNYEELMAQVFGITGFHLFNFFAGVLAFGAMTAYLIVIGDTVTEIALA-SGTSSLFTNRVSVVSMLGTLVILPVASLKDLAKLSYTSFVSVIADVLLVCLVVWNGPTESDDVPGIDR--SETLQFIRPTIFAGFGAMSFAFVCQSSSFLVYRSMAVRGVEKWNQVSRVAVSAATAMGLALSFAGYASFVNKTEGNILNNFSTDHKAANVARGFLAVTMILTYPIEMYVARHVLDASVFQTVLGLGPITSVRHYGITLGLWFLSMMLAASTNSLGDIMEIFGAFAASMIGYVMPAMLYIQINRAQ--LRAAKAKWR--PGSPQYESSLLERLWAIRNFFLPFFMVVFGVIAMIAGVATAVI 1459
            +  + S KS+S  +      + G++  P N   +       S A A  NF N+I+GAGI+G+PFAL ++GL  G  ++   A+L+ +++ ML+    K     YE L  Q+ G   F++     G  AFG MTAYLI+IGD  T ++ A  GT ++F++R  ++     + +LP++ ++D+ KLS+ SF+ +++  ++V  V+W+GP  +  +   +   S  +  I  T+FAG G MSFAFVC  S+F+V+ S+      +W  ++ ++V  A  M      +GY +F   T+ +IL NF    +  N++R  L  TMI TYP+EM+VARH     + Q V      +  ++   ++ L+  ++ +A +   +G ++E+ GA +AS +GY++P  +Y+++   +   R A A W   P     +   + ++        P  +V FG++AM+AG  TA I
Sbjct:   11 DQRLASIKSIS-PKALEEARKSGVKSKPDNYNRS---EDVKSVARASFNFANTILGAGIIGMPFALKRTGLLMGCLLMMFVAYLSAYSSRMLVQCANKVGATTYEGLCRQILGGKAFNVVLLCMGAFAFGGMTAYLILIGDAATFVSRAWFGTDTIFSDRRILILGFSCICVLPLSLIRDITKLSFGSFLGLVSIAVIVITVIWHGPAAAQQMTLAENQTSSAISVIESTLFAGIGTMSFAFVCNHSAFIVFNSLDHPTPSRWRLITNISVGFAFFMCFIFGVSGYVNFRQSTKADILGNFPASDEVMNISRVMLVTTMIFTYPMEMFVARH----CILQVVTQEEHCSYWKYALASVSLFAATLAIAITVPDVGIVIEVTGAISASCVGYILPGFIYLKMTGYEEVKRNALAVWNRAPNDVGDKPPFMNQVRMATRDVGPLMLVGFGILAMVAGTVTAFI 463          
BLAST of mRNA_H-paniculata_contig5754.13321.1 vs. uniprot
Match: A0A0G4J0L4_PLABS (Aa_trans domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J0L4_PLABS)

HSP 1 Score: 228 bits (580), Expect = 3.920e-62
Identity = 152/438 (34.70%), Postives = 251/438 (57.31%), Query Frame = 2
Query:  167 LEDAPANDQETIYA--SGTSSTAGAVANFLNSIVGAGIVGLPFALAQSGLWAGMFMICLAAFLTHHATTMLISAGEKANRLNYEELMAQVFGITGFHLFNFFAGVLAFGAMTAYLIVIGDTVTEIALASGTSSLFTNRVSVVSMLGTLVILPVASLKDLAKLSYTSFVSVIADVLLVCLVVWNG-PTESDDVPGIDRSETLQFIRP-TIFAGFGAMSFAFVCQSSSFLVYRSMAVRGVEKWNQVSRVAVSAATAMGLALSFAGYASFVNKTEGNILNNFSTDHKAANVARGFLAVTMILTYPIEMYVARHVLDASVFQTVLGLG----PITSVRHYGITLGLWFLSMMLAA-STNSLGDIMEIFGAFAASMIGYVMPAMLYIQINRAQLRAAKAKWRPGSPQYESSLLERLWAIRNFFLPFFMVVFGVIAMIAGVATA 1453
            +  APA+  + +Y    G +S   A  NF+NS++GAGI+GLP+AL ++G  +G+ ++   A LT  +  +L+SAG ++NR  +E L+  +FG     +   F  V +FGAMTAY++VIGDTV  +  A+ T  +   R+++V ++    +LP+  L+ +  LS TS +S++A + +V  + ++  P  +DDV      +    I+P ++F G GAMSFAFVCQ+++F++YRS+      ++  V+ V++ A+  + LA++  G+  F+ +T+ NILNNF  D     VAR  LAV M+LTYP+EMYVAR         T+  LG      T  ++  + +GLW  +  +A  + + LG +ME+ GAFAAS +GY++P M +++  R   +  +  W              + A+        ++VFG +AMIAG  +A
Sbjct:    3 MSKAPAHGNDDVYGRPGGNASIPSASFNFMNSVIGAGIIGLPYALKRTGSISGVALLLFIAALTDFSVALLVSAGVRSNRFTFEGLVRHLFGDAARRVVLIFMFVFSFGAMTAYVVVIGDTVPSVIHAA-TGMVVDRRLTIV-VVAVAFLLPLVLLRSIEHLSPTSLLSMVAVLGIVGTIAFHRLPFSADDV------DAFAVIKPRSMFGGIGAMSFAFVCQNNTFILYRSLQDPTPARFRIVTHVSLGASALICLAMAVTGFFRFLGQTKSNILNNFDDDDVTVGVARALLAVNMVLTYPLEMYVARQC-------TMQALGVPDAQHTFAKYAPVVVGLWLATTGVAVVAGDDLGTVMELTGAFAASCLGYIIPGMCHLKAVRDNGKTGRITWSA----------REIGAVA-------LIVFGTVAMIAGSTSA 408          
BLAST of mRNA_H-paniculata_contig5754.13321.1 vs. uniprot
Match: A0A7S1URN2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1URN2_9STRA)

HSP 1 Score: 218 bits (555), Expect = 1.070e-57
Identity = 139/373 (37.27%), Postives = 213/373 (57.10%), Query Frame = 2
Query:  242 NFLNSIVGAGIVGLPFALAQSGLWAGMFMICLAAFLTHHATTMLISAGEKANRL------NYEELMAQVFGITG--FHLFNFFAGVLAFGAMTAYLIVIGDTV-TEIALASGTSSLFTNRVSVVSMLGTLVILPVASLKDLAKLSYTSFVSVIADVLLVCLVVWNGPTESD--DVPGIDRSETLQFIRPTIFAGFGAMSFAFVCQSSSFLVYRSMAVRGVEKWNQVSRVAVSAATAMGLALSFAGYASFVNKTEGNILNNFSTDHKAANVARGFLAVTMILTYPIEMYVARHV---------LDASVFQTVLGLGP--ITSVRHYGITLGLWFLSMMLAASTNSLGDIMEIFGAFAASMIGYVMPAMLYIQIN 1294
            N +N+IVGAGI+G+P++L Q GL AG+F++ L  +LT  +  M++       +L      ++E++M   +G  G  F LFN F  +LA+GAM AYLI+I DTV T + LA G+   F  R  V+     +VILP++  +D+A L+ TS +SV ADV+LV  V    P +S   D  G        ++ PT+F G G +S A  CQ S+F+V  S+    V++W  V+  ++S AT + L L   GY  F+++TEG++LNNF    + +N AR  LA+TM  TYP+E +VARHV         +D  V        P  +   R Y +TLG++ L+++ A   + LG ++ I G+  AS + Y+ P M++  +N
Sbjct:    1 NLVNTIVGAGIIGIPYSLRQCGLIAGVFLLILVGYLTDKSLRMIVETASFHPKLRTRQVLSFEDMMRYPYGRLGWGFILFNMF--ILAYGAMIAYLIIIKDTVPTILGLAEGSEGSFVEREMVMIATSLIVILPLSLQRDMASLAVTSLLSVTADVILVGFVAAFSPIKSTVADAGGFGEVLRDDWLNPTLFVGLGIVSTAMACQHSAFIVSGSLQKITVKRWGSVTFRSISCATILCLILGVCGYLGFLDETEGDVLNNFPAHSRESNGARALLAITMFFTYPMEAFVARHVFVKLMYNGNMDGEVVPETGAFRPEFLCFSRRYFLTLGIYALTLIPALLLDDLGPVLSITGSLGASCLSYIAPGMVFFGVN 371          
BLAST of mRNA_H-paniculata_contig5754.13321.1 vs. uniprot
Match: B7G9E3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9E3_PHATC)

HSP 1 Score: 213 bits (541), Expect = 1.120e-54
Identity = 133/379 (35.09%), Postives = 215/379 (56.73%), Query Frame = 2
Query:  218 SSTAGAVANFLNSIVGAGIVGLPFALAQSGLWAGMFMICLAAFLTHHATTMLISAGEKANRLNYEELMAQVFGITGFHLFNFFAGVLAFGAMTAYLIVIGDTVTEIALASGTSSLFTNRVSVVSMLGTLVILPVASLKDLAKLSYTSFVSVIADVLLVCLVVWNGPTESD--DVPGIDRSETLQFIRPTIFAGFGAMSFAFVCQSSSFLVYRSMAVRGVEKWNQVSRVAVSAATAMGLALSFAGYASFVNKTEGNILNNFSTDHKAANVARGFLAVTMILTYPIEMYVARHVLDASVFQTVLGL-GPITSV-----RHYGITLGLWFLSMMLAASTNSLGDIMEIFGAFAASMIGYVMPAMLYIQINRAQ-LRAAKAKW 1327
            S+  G  AN +N+IVG+GIVG+P+A+ Q+G  AG+F+I L A +T  +  +LIS  +  +  +YE  M   FG+ GF        V+A+GAM +YL+++ D+   + +   T   F  + +V+ ++  L+++P++S +D+A L++TS +SVI D +LV LV WN P E    +  G        F   TIF G G +SFAFVCQ S+F++  S+    V +W+ V+R A+     +      +GY  +++KT+GNILNN S D  +AN ARG L  TM+  YP+E +VARHV    +F       G  +++     R  G+T+ L+ ++++ AA    LG ++   GA   S + Y+ P ++Y  ++  + L    A W
Sbjct:   42 STMLGCTANLVNAIVGSGIVGIPYAIQQAGFGAGLFLILLCAVITEKSLRLLISTAKHVHCPSYETAMEAPFGVAGFRFVAINMFVMAYGAMLSYLMIVKDSF-SVMIGIETDD-FPMKRAVLLLVSILIMVPLSSQRDMADLAWTSRLSVIIDTVLVGLVAWNAPIEESFQNRGGWPAVLIDTFHADTIFVGLGVLSFAFVCQHSAFIIAGSLDRPTVARWSIVTRNALILCACLATTCGVSGYLGYLDKTQGNILNNLSVDSFSANAARGMLGCTMLFVYPLESFVARHVCVVLLFSGRRAHEGEDSAILNRRDRRIGLTVLLYLIAVIPAAFFEDLGSVLAATGAVGGSCLSYIGPGLVYFGVHGGRFLELVDASW 418          
BLAST of mRNA_H-paniculata_contig5754.13321.1 vs. uniprot
Match: A0A4P9ZKR3_9FUNG (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZKR3_9FUNG)

HSP 1 Score: 207 bits (528), Expect = 1.600e-54
Identity = 123/386 (31.87%), Postives = 217/386 (56.22%), Query Frame = 2
Query:  218 SSTAGAVANFLNSIVGAGIVGLPFALAQSGLWAGMFMICLAAFLTHHATTMLISAGEKANRLNYEELMAQVFGITGFHLFNFFAGVLAFGAMTAYLIVIGDTVTEI-------ALASGTSSLFTNRVSVVSMLGTLVILPVASLKDLAKLSYTSFVSVIADVLLVCLVVWNGPTESDDVPGIDRSETLQFIRPTIFAGFGAMSFAFVCQSSSFLVYRSMAVRGVEKWNQVSRVAVSAATAMGLALSFAGYASFVNKTEGNILNNFSTDHKAANVARGFLAVTMILTYPIEMYVARHVLDA--SVFQTVLGLG-----PITSVRHYGITLGLWFLSMMLAASTNSLGDIMEIFGAFAASMIGYVMPAMLYIQINRAQL--RAAKAKW 1327
            SS  G+  N  N+IVGAGI+GLPFA  ++G + GM ++   A++T     +L  A + + R  Y+EL+   FG  GFH  +FF  V AFG M A+ ++IGDTV  +        L+S   +  T+R ++++++   +  P++  +D+ KL+ TS ++++A +++V  VV   P  + ++ G +  +   F++P +F   G M FAFVC  +SF++Y ++    ++++ +V R++   +  + L L+  GY +F +KT GNILNNF  ++   N+AR      MI T+P+E+ VAR V+D   S++            P +  RH G+T  +   ++ +A S   LG I+E+ G  +A+ + +++PA  ++++    L  RA    W
Sbjct:   53 SSVLGSFFNMTNAIVGAGIIGLPFAFKEAGYFTGMILLLTLAYITDWTLRLLAHATKLSGRSTYQELVCFCFGRIGFHAISFFQFVFAFGGMCAFNVIIGDTVPHVIRSVVPGVLSSPVLTFLTSRRAMITLITLFISFPLSLYRDMGKLAKTSALALVAMLVIVVAVVIEAPKAAPELRGNNIGKWA-FMKPDVFQAIGVMGFAFVCHHNSFMIYSALKTPTLDRYARVIRLSTILSATVCLVLASVGYLNFTDKTRGNILNNFPDNNLLINIARFCFGFNMITTFPMELLVAREVIDGYVSLYSQPKSASNHTEVPFSMTRHVGVTTAMVLATLFVALSVCDLGIIIELTGGVSATALAFILPAACHLKLGSGPLLTRAKLPLW 437          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5754.13321.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFS5_ECTSI1.030e-16659.53Aa_trans domain-containing protein n=2 Tax=Ectocar... [more]
D8LFS4_ECTSI3.120e-16259.72Aa_trans domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CLI3_9STRA2.170e-10845.14Transmembrane amino acid transporter protein-domai... [more]
A0A2R5GEI9_9STRA1.760e-8539.77Amino acid transporter, putative n=1 Tax=Hondaea f... [more]
A0A0G4IJK5_PLABS6.590e-6635.53Aa_trans domain-containing protein n=1 Tax=Plasmod... [more]
A0A0H5QQI6_9EUKA2.100e-6231.24Aa_trans domain-containing protein n=1 Tax=Spongos... [more]
A0A0G4J0L4_PLABS3.920e-6234.70Aa_trans domain-containing protein n=1 Tax=Plasmod... [more]
A0A7S1URN2_9STRA1.070e-5737.27Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
B7G9E3_PHATC1.120e-5435.09Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A4P9ZKR3_9FUNG1.600e-5431.87Transmembrane amino acid transporter protein-domai... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5754contigH-paniculata_contig5754:3675..13569 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score511.1
Seed ortholog evalue5.4e-142
Seed eggNOG ortholog2880.D8LFS5
Preferred nameSLC38A11
KEGG koko:K14997
KEGG TC2.A.18.6
Hectar predicted targeting categoryother localisation
GOsGO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0012505,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0034220,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0098656,GO:1903825,GO:1905039
EggNOG free text desc.amino acid
EggNOG OGsCOG0814@1,KOG1305@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons5
Model size3255
Cds size1431
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930621.4913793-UTR-H-paniculata_contig5754:3674..37291622930621.4913793-UTR-H-paniculata_contig5754:3674..3729Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5754 3675..3729 +
1691481376.3598025-UTR-H-paniculata_contig5754:3674..37291691481376.3598025-UTR-H-paniculata_contig5754:3674..3729Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5754 3675..3729 +
1622930621.6416216-UTR-H-paniculata_contig5754:11800..135691622930621.6416216-UTR-H-paniculata_contig5754:11800..13569Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5754 11801..13569 +
1691481376.425324-UTR-H-paniculata_contig5754:11800..135691691481376.425324-UTR-H-paniculata_contig5754:11800..13569Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5754 11801..13569 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930621.5272028-CDS-H-paniculata_contig5754:3729..39751622930621.5272028-CDS-H-paniculata_contig5754:3729..3975Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5754 3730..3975 +
1691481376.372298-CDS-H-paniculata_contig5754:3729..39751691481376.372298-CDS-H-paniculata_contig5754:3729..3975Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5754 3730..3975 +
1622930621.546893-CDS-H-paniculata_contig5754:8247..86721622930621.546893-CDS-H-paniculata_contig5754:8247..8672Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5754 8248..8672 +
1691481376.3826902-CDS-H-paniculata_contig5754:8247..86721691481376.3826902-CDS-H-paniculata_contig5754:8247..8672Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5754 8248..8672 +
1622930621.5684643-CDS-H-paniculata_contig5754:9324..96431622930621.5684643-CDS-H-paniculata_contig5754:9324..9643Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5754 9325..9643 +
1691481376.3958862-CDS-H-paniculata_contig5754:9324..96431691481376.3958862-CDS-H-paniculata_contig5754:9324..9643Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5754 9325..9643 +
1622930621.6094453-CDS-H-paniculata_contig5754:10718..109221622930621.6094453-CDS-H-paniculata_contig5754:10718..10922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5754 10719..10922 +
1691481376.4071455-CDS-H-paniculata_contig5754:10718..109221691481376.4071455-CDS-H-paniculata_contig5754:10718..10922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5754 10719..10922 +
1622930621.6274657-CDS-H-paniculata_contig5754:11563..118001622930621.6274657-CDS-H-paniculata_contig5754:11563..11800Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5754 11564..11800 +
1691481376.4165356-CDS-H-paniculata_contig5754:11563..118001691481376.4165356-CDS-H-paniculata_contig5754:11563..11800Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5754 11564..11800 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5754.13321.1prot_H-paniculata_contig5754.13321.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5754 3730..11800 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5754.13321.1

>prot_H-paniculata_contig5754.13321.1 ID=prot_H-paniculata_contig5754.13321.1|Name=mRNA_H-paniculata_contig5754.13321.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=477bp
MEDPRSFPHNEGGFEMTIGSRKSVSGTRGTAAVGQLGLEDAPANDQETIY
ASGTSSTAGAVANFLNSIVGAGIVGLPFALAQSGLWAGMFMICLAAFLTH
HATTMLISAGEKANRLNYEELMAQVFGITGFHLFNFFAGVLAFGAMTAYL
IVIGDTVTEIALASGTSSLFTNRVSVVSMLGTLVILPVASLKDLAKLSYT
SFVSVIADVLLVCLVVWNGPTESDDVPGIDRSETLQFIRPTIFAGFGAMS
FAFVCQSSSFLVYRSMAVRGVEKWNQVSRVAVSAATAMGLALSFAGYASF
VNKTEGNILNNFSTDHKAANVARGFLAVTMILTYPIEMYVARHVLDASVF
QTVLGLGPITSVRHYGITLGLWFLSMMLAASTNSLGDIMEIFGAFAASMI
GYVMPAMLYIQINRAQLRAAKAKWRPGSPQYESSLLERLWAIRNFFLPFF
MVVFGVIAMIAGVATAVITELSVTKT*
back to top

mRNA from alignment at H-paniculata_contig5754:3675..13569+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5754.13321.1 ID=mRNA_H-paniculata_contig5754.13321.1|Name=mRNA_H-paniculata_contig5754.13321.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9895bp|location=Sequence derived from alignment at H-paniculata_contig5754:3675..13569+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCGAGTTCCGAGGTCACCGTCAAACATATGGGAGAGCAAAACGACGCTT GAGTAATGGAAGACCCCAGGAGCTTTCCTCACAATGAGGGTGGCTTCGAG ATGACAATAGGCTCTAGGAAATCTGTATCTGGGACTAGAGGCACAGCAGC AGTTGGGCAATTAGGGTTGGAGGATGCTCCCGCGAATGATCAAGAAACAA TATACGCTAGCGGGACATCCTCAACAGCCGGTGCTGTGGCCAACTTCTTG AACTCTATTGTAGGGGCTGGGATCGTAGGTCTGCCTTTCGCGTTGGCACA GGTGCGTGTTCGTGTGTGTTTACTTTTGGGAGTGTGGAAGTAGCGGATGT GGTGACTGCGTTGATGGATGGACGAAACCAAGGATTCAGTGCTCAGTGGG CGTACTTGTTGAGGTCGTTCACAAGAGACTAATCTGACAGCGCAAGGAAA CATCTTGTAAGAGGAGAGCAGAATGAAGTGCACCGTGTAACGGAAACGAG CCCGCGCTCCGTCTGAAGGTCTGAATGAGATGTCTGAGGTATTCTGCAGT CACAGAGCGCATTTCGTATCTACTCTGTGTTATTCATATTGTTGATTCTG CCATTGCTGTTTCGTCCTAGTTTGTTGGTTCGCGCCTGTCGTGTGTGTTC GACTATTCCGACTGCAATGTGAACGAACCTTCATTGTCGTTACTTTCGCT TTCCTCTAAATTTCTGCATCGACACGAAAGAGACGGTTATCATAACCACT TAACAGACAGTCACGGACTACATTGATTGTACTGTTCTGTATTGTACTAG AGGAGGTTTATGGTCTCTAGCTAGGCATTGTATTATCTACGCTATATCAT AGCTGACAGCCCATCTACTTAGTCCACGCCTATGCACGCTTCTGACCGAA CGGAAATTGGCAAGCTGGTTGTGTTGAAATATTTATGGGATCTACAAGCC GATATCTCCGTAGTAGGTTCGAAGTTCTGGCATTGACCACGTTACTGTCG TGTGAGAGTTGTGTTGACGAGACTTCGTTATTGATTTGAAATACTCCGAT ACCGCACTAGGTACGGCAGTGTGTGGCGCAGTCGAGGTCCTACGTTAAGG CAGGTAATGTAATTCATCAACCCAATTGGCATTGACGTTGGAACCGGCCT TTCGTTGGCGTCGATCCTTTGAGCGCCGATTCTCTTGTACTGATAGTACC CACCTCTTCCGCACTTGAAAAAACAGGACAAATAACAGAACAAGGCGAAC CTGCTGACGTAATTGTAGCAACAAAAAGTCGCCTCTCTTCAGCCAGTCAT TGCAATACAGACAGTAAGTGCTTACTGCAAAGGTTGTACTCACAAAGATT GCAGCGCTCGACATAAGTACTCAGGTTTATTTTTGTTCCGAAATAGCCTT CATAACTCCTTTGGAACCAGACCGTCTACAATCCCTGACAAATCCGTGCT CGAAAAACAGGCATTAACCCGTCAGAATTTTCCTTGTGGCTAACGCCCAC AACTTGATTACGAGAGTGTGGAGGCTCTATATACAATATAGACGGTCTTG TTATTATTGCAGACACATAAACAGGAGTTGGTATGGTTTTGCATTCCACG GTAGCATCACTTGATTGAAACGGGTAGCACCAACTAAGTCGTTAGTGACT GACTGAACAGGGCATGTGTGCCATACAAAGCCGCACGCCAGGACATGAAA TCAAACACACCACCATGGCTCTCACAGCGCTGTTTCGACACGTAAACAGT ATAATGCGGAGATATCGTTTGCCATACTGCGTCCTTGTCGTTTTTGAAAG CATCGTCCTCAGTCACGGTGACAGGGTGCCCCGGGATACCATGCGCTGCC ATCCCTCTGCTGCTCAATGTCGACACTATGCATCTGCTGTGCTCACCAAA CATAACCAGACCAAAAGGGTGTTTCAATGACACAGTAGCCCAAAATAAAA TAACCACGACTGCACGTCAGGTGCTTTTATCATTCTATTTCTAACTCCGG ACCCATAGGGGTTAAACAACGACCCAAGGGTTGAAGTGGACAAAACCACA CTATAGCCTCAACATAACTCCGATGAATAGGGTGTATTTGACATGCTGTT GAAGTTGGACGAACGATCTTAAAAACAGGACATGCGGTTGTGTACCATTG CTTTGGTTGTTACCCATCAGGCACAAAGAAGAGAAGTAAAAGGCATATTT TCCTTTCATTACATGGTTACGTCCCTGTGCTGCTTGCTACATCATAGTCA CTTGACATTGGCAAGGTTGGACTGGACTGGACTGAACAAGAAAAATGCAT CCCGGAAAAGAGAAGAAACTCCATTCGGATACGGAAGCAAAATGCACACG GCAATGGATGGCATCTTCAACTTTGCAAAACACTTGCAAAAATTCAAGAA AATGAATGAAATGAATGCTTCCATCCTTGAAAAATCCACGAGTTTAGCAA ACGCTGTTTGCTATTTAGCCACGTAAAATGGCGGCGCAACACCCATAGGC ATCGATTGTTACATAGATTGAACCAACATGGGCGGGTTTATTGGAAAACT CTAAAATCCTGCTCAGTGGCTTTCTGATGAGTTGATCCACTACTGCCGAC GCAATTCGTGAGGTTGTCAAAATTGCATCTTCACGGATGCGGCGAACTTT TTAAAAATATGACTCTCCATGGCTGACTTCAAAATTGTGCTGAGTCAGCG AAGATAGTCGTGTCTACGATGCCAACGTTTATGCGATACAGTACCCTACG TATATTGAACAATCCCTGTACTTGATACATCTACTCAAGATAAAGGGCAG GATACCAACGGCTGCACTGTTGTGCTCTTCTTTGTATCTGACTTGTGATA TTTTGATAGAGCTGAGTGTACTTTTTAGAGGGATTAGGCCACCTTTCGTT TGTTACTAGGTTGTACATTGCATTGTCTGTACCTGTTGCGAATACTTTCC CGCGGCACTGGACAGTCTGAACCAGGTAAAATAATCAGTATGGAGAGGAA TCGGCGAGGATTGCAAGAATAAAACCCCCCCCCGACTTGTCTCACTTGTC GAGTTATGACCGCACACGAAAATTTGACTTAATGGCGACCGCCGCTTCAA CACAAATGCAAAAAAAACACACAAATCTTACAAACGAGACGCTACTTAAA ACCACTGAGGGGCATTTTCTTCGAAGCTAAAGCTTCACTCATCCCCCGGC TGAATGAAACGAAGCAGAGCGTTCCTCGAACGGTTATTTCGTGGATTCTA ATAAAAGACCTCACCAAAGATCGTGCGCAAGGCTACCTCGTTACAGGATC GCGAAGCGTATGCTGCGATGAAAGCCACGTTGGGTTTACGTTGGCGTAAA TTTTGAGTGCATCGATTCCGTGCGGCGAAAGGCATGGGGTGCCGGCTCCA AACAACAGAGCAGGGCTGGCGTCGCTTCAGAGATGCGCAGGATTGTGACT TAACAGACCTTTTGCATGGTCCTTAGATCATGATAAACCTCACTAAACCT GAACGCGCCCATTGTGAGGGCCGAATCGACCGTAAGGACCGGCCATTAGT TGTGTTCCGGGAATCCGTCGATCTTCAATATGGCATAGCACTCAAGTGGC CGGTCTCAAAGTGGAACCTCGACTTTCCGACCGCCTGGTACACCGTTAGT GTATGTTGGCAGAGCTTCAGGGCTTACATCTGACTAAACTGCATTGGCAA AAGGTCGAACCAGCTGTGTTGGCAAATCGCAGAGAGAGAGAGTATGTATG TGTGAACCAAGTTGCATTTGGCAGAAGAACGTGGTGCTCCAGTCAGACAA CAGGATAGGGCACCAGTTTGTGGCGCAGAAGGGTTCAGGTAAATCTGGTT TATCTCCTTTGCTGATAACGTAATTTCATCCTAGAGGTCACGTCTGGCGT GAGCGTAAACATTACGGTGGGTTGGACGTCACGAGTGTGCTCCATGAGAA ACCCTTGCTTTCAAATTGCATTTTATATATCTCCTCTTGTACGGTGGAGA AACTAAAACATGTACTAGACTGAGAGCCATCTCAAGTAGCCATTTTTCGC GGGACGGTGCACATTTCATTTTTCCAAGCTCATAAATGAAGTTTCACCAA ACAAATGAACGTTCGAAAGAGCCTGAAAGTTTTCGCAATTTTCTAGTTTC ATGACCCGGACACCGCGATCGAACGCATCGCGTTCAAAAGACGTTGCCCT ACCAGCGCGACAGCCGCAGGGTGCGTGCCTCGTCATCCTCGTAGGGGGCA ATGACACTTGAAAATCCTCGGCTACTTGTATTATAGGCGTTTGTGCGCGA GCTTTGACGCCGTGTGTAGTGTCTTAGATTTGCTTTGCTCTTTCACCAGC TGCTTCGAATGGTCCTCACTTTTTACTTTTTACACAACGCGGACTGTCGG GAGGAAAATTCAAAAAAGGCGTTTTCGTTTGTGCAGGTGTTGTTGGGCTT ACCTTTTCTTATTATGATTATAATAGATCTCTAAAGTTCGCGTTTCTGTT TCCCCTGCTAATCTCGAAATTCCTCTCATTGTTTTCCTGATTTTCTTTTT TTTTCCTTTTTTTTTTTACGCAGAGCGGCTTGTGGGCGGGAATGTTCATG ATCTGTCTCGCGGCGTTCCTAACCCACCACGCCACGACGATGCTCATCTC GGCGGGGGAAAAGGCCAATCGTCTGAACTATGAGGAGCTCATGGCGCAGG TATTTGGCATCACCGGCTTCCATCTCTTCAATTTCTTCGCGGGGGTGTTA GCGTTCGGGGCCATGACGGCGTACCTTATCGTGATCGGAGATACGGTGAC TGAAATCGCCTTGGCCTCGGGAACCTCGAGCTTGTTCACGAACCGCGTCA GTGTAGTCTCAATGCTCGGCACGCTGGTGATCCTGCCCGTGGCCAGTCTG AAGGACCTGGCCAAGCTGTCCTACACGTCGTTCGTGAGCGTTATCGCGGA CGTACTGCTGGTGTGCCTCGTGGTGTGGAATGGGCCCACGGAGAGCGAGT GAGTTTGTTGTGGAACTTGTTCTCTCTATGAAGACCAAACTATAATTTTT GGAAATTTGACTCAAAGTACTTCGTCTGACCGAAGTAGCCAGCTAGCTTA ACCGCTAGGACGACCCCTATTTAGGTTTTTCTGGGTAAACAGGTTTGTAC ACCTAAGCTCTGGTGTTTAGAGATACAAACAACACTTCGGTCAAGGAGCG AGCTAACGACCTAAATCAGAATGCCAGCACCCTCACGAAATGAGCACCTA GCACTCATAATTTTGTTTCTCGTACGTACGTCCTGTACAAAACAAATATT CACTTCCTTGTCCACCCACTCATGCATGGTAATGCGCATCTGACGGATAT CTAGTCGTTTCCTTCGTCTTACTCATGGCTGTTGCTATTGCCACGGCAAA AAGAGCTTCGAGTACTCGTAGTAATATCTCTCACACGTGCTGTACCAAAT AAACATTCTCCTCCTTGTCTATCCAACTCATGCAGAGTTATGCCGATCTG ACGGATGCCTTTTTCGTTTTTTTTCGTTCCACTCGGTGCTATTGCTATTG CTATTGCTGTCGCGTTTTTCGTTTTGGCTTGCCTCGCTTTAACTCATACC GGGGGTGTTGGGGTGTGGGGTGGGGGGTTCGATTGTTTCCGTGCGCGCAG TGACGTCCCCGGGATAGACCGATCAGAGACACTGCAGTTCATTCGACCCA CGATTTTCGCGGGCTTCGGAGCCATGTCGTTCGCTTTCGTGTGTCAGAGC TCCTCGTTCTTGGTGTATCGGAGCATGGCCGTTAGGGGCGTCGAGAAGTG GAATCAGGTGTCGAGAGTGGCTGTTTCCGCCGCCACGGCGATGGGCTTGG CGCTGTCCTTCGCCGGCTACGCGAGCTTCGTGAACAAGACGGAAGGGAAT ATTCTCAACAATTTCTCGACGGACCATAAAGCCGCGAACGTGGCTCGAGG ATTTCTTGCCGTCACGATGGTAAGAAAAAAAGAGTAAAAACAAACGAACA AAAACTTCCAAGTGGTTTGGGGTGTGCGCAGGATATTAAATAGCGCACAA AAATCTCTCAGGCGGTCCCGTTGGAAGGCCGCGTCGCCTCCGGCGGCAAC CCTCGCTCGACTGAGCTTTTGGAAAAAACGCTCCATTTTGCACCGATTTT TTTGGCATGTTATGCCCTTTTGAACCGAAATACAATCTCCACTTTCGCAG CAAGCGAAAGAACCGGAACAAATAATCCGCCGAGAAATTTCGTCGTCCGG CGATTCCCCCCCCTTTTTTTTCTCAGCGGCTAGGTGCCGAATGTGCGTCA CAGTCCCGGCGGAAACGCCTTTTTCCATGGTTTTCCGGCCATGATGCGCG GATTTGTGCGCTATTTAATACCCTGGATGGAGCACGCATAGTGCATGTTG AAAACATTTCACACGCAGGATGAAGTTGGGCCCGATTAAGATGCTAGTCA GCCTTCGTCAACCGTCGTCAGCCCCACTTGGATGATTGCCTTAAAGATCA GCTAACCGCGATCCCGAAAATTTGATCGAGCACTGAAGGCAGACAAATGG TTGGCCCGTATCCTCCTTACGGAGATGTGAAAACGGGGATTTGCATCGTC ACCATTGCGAAAAAAATCGAATTAATCAAGTTCCAAAAATGTTGCTTTTT GTGTTTGTTTTGTCCAACCGAGTCTGAACACGCCGATATTTTGTACTGGT CATTGTTGCAAGATGGTTGGGTGGAGCAGGTTGCGAAAAAAGAAGGATTG ATCAAAGAAACACAGCCGCCGCAGAAGATCCCGAAACTACACGTACATAA AAGAGAGTACATGTGCAATTTGCTGGAACGATAACCTTTGCTCAGCTACA CACGCCAGGCGCGATTTGACGAGTATCCGTTCCGTGTTAGAGGAGCTATT AGTAGGGGTTTTTCGAATGTGCAAATTCGGACACCAAAGGATCATGACAC ATACACATGTCGATCGAGGTATATGAACTTTACGTGCTATATCGGTGCTA CTGTACTTCGACGTGTGTCCTCTTTTTTTTCTGCTGAACTCCAGATTTTG ACATACCCAATCGAGATGTATGTGGCACGCCATGTCCTGGATGCTTCGGT GTTCCAGACTGTACTAGGCTTGGGGCCGATTACGTCCGTCCGCCACTACG GAATCACGTTGGGATTGTGGTTTCTGTCCATGATGCTAGCCGCGTCTACC AACTCGCTCGGAGATATCATGGAGATCTTCGGAGCATTTGCCGCGAGCGT GAGTTCAAAAAGCTGATCGCCTGACCGCGGGCTCGCGCGAGATTGGGCTC AAAAATCTTTCGAGAGACCGAAAAAAATGTTTGTCCGTGCGCGCACGAAT GAGGAGAAGTTGCAACACCGCCAGCTGATTAGTACAATGCGAGTACATGG TACCATAGTAGAGAAGTGAAACAGTACGTAAGGTGTTGGGAAATGAATGT TTTGGGTTTTGACACCTTGGATAAAGGTCGATGAAGGTCAGTGGAGGTCG CCGTGCAGTTTGGGACAAAAGCATCACGACAACACTGGTTTTTTTCCCCA ACCCGTTCGAATCGATAGGTGCACGCCTTCCACTCCTTCGTGGGGTATAT TCATTCTAGAGTATGAGCGTACCTCCCCACAATTTGTTGGCTAATTTGGA GCATGAAGGTTGAGTGAAAGTTTTAGGGTCCAAGAAGGTGTTTTTACTTG TTGCTTGGAAAGTGAAACCGATATCCGAGCTGTGGAGATTTTGTTGTCAT TTTCCCCGTCCATTTGTAGTTTTTGAGCTGAAAGCAAGACCTAGTTTACC GGTGCAATTATGTCAGCAACCCCCCACTGAGGTAACCGAATGCCCTCCCG TTCTACCGTTTCCCCCGACCGTGAACAACGTGAATACAGATGATCGGATA TGTCATGCCGGCTATGTTGTACATACAAATCAATCGCGCGCAGCTGCGGG CGGCCAAGGCGAAGTGGCGGCCTGGGTCTCCTCAGTACGAGAGCAGCTTG CTCGAGCGACTATGGGCCATACGGAATTTTTTTCTTCCGTTCTTCATGGT CGTCTTCGGCGTTATCGCCATGATAGCCGGCGTTGCTACTGCTGTGATTA CGGAATTGTCTGTAACCAAGACATGATGGAAAACAATGATGATGAAAGCG TAGTATTTTTTTTTTTTTCGGGTATATTGGGGGCACGATGAGTGGATGAA GGAGCCAGGCGGAGGTGCTCCATAGCTCTACAAATGTAAGGTCTCTTGTT CGTGTGTGTGTGTGTGTGTGCCTTTTAGCGCGGGTATTTTTTTTTTACTG TGGTCGATCTTTTGTTATGCCTTGCACGGGCGTGTGGTCTGTGATTCAAT TTCGCCATAAACTCGTGCCGTTAATTAATAGTGTGGATATGGCCAATTTG GATCTGTAGAGTTGGGCAGACTTTTCGTCACCCCGTTCCACATGCATAGG ATGAGGACAACAGAAAAAGAGAGAAAGCTAGAGCGAAAGAGGGAGAGGTT TGAAGAAGATGTCAGCAATTTTCGTACTCGAATTTTTTCCAGGAATAATC TGATCGGTCGTGACGTCATCCACGGTTATGATGTAACTCTTCGATCAGGG TAATTGTACAGGTATCAAATGTTCAACAACAGATTCTCTCGAGCTTTGTA TTTGTCCAGCAACGCCCCGCCCCTGGATACGGCATACATGTGTAGCAGAA AGCAGCTCACCATTGAGCTACAGAGTCAGCGCTGACTCTATAGCTCAATG GTAAGCTGCTTTCTGCTACACATGTTTTGAACCACTGCTGGCGCAACCGT TGGGTCTGCCAAGTTAAGCGCACGGAGAACTTGTGACGGGAGATACGTCA AAGACACGCATGCCGGCCTCCCAAAAAATGGACCATGCATTATAATAATT GAGCTCAAGATGGATAGACATTAAACGTTGACATCCTAAAGTTGTCGAGG ATGTTATCGGGTACATCTCGCTCTGTACGTTAGCTGGATATGCGTATTGG AGCATATACTCTACTTTAACAGCGAGTAGTTTTTCCAAGGTACGTGCAAG ATTTTCTTGGAAAAGCTTGATATTGCAGCTTCGGGTTTTTCGGCGCGCGC GCGGGGGGGGGTGTTGCACTCATGGATGATGAATTTCGTGTCCTAATGGT TTGGTGTTTGTATTGGTCTTATTGTATCTGGGAATAGCTGTGAGCTGGTT ATCGTTAACGAGGGGGTAAAAAAAGTCCATGGGTAGCACTGAAGTCATGT TTCTTGGGACTTGTCTCGACAGTTGGGTTGCAATGGAGTGTAGATTGGCT GATGGCGTAAAGAAGTTGGTCATCATTCAATGTTTCGGACTCTAGGTAGG TCACTTGTGAATTGAAAAATTGTCGAGTGTAACATACATATGATGAACTT TTTGGGTTGCCTTTTGTTAGTTCCCTCCTTGCTGAGTTATTTTGTTTGTG TGGATTGATTTTGTGCGGTGTACAACATACTCGACTTTCGTGGATATATA TTATACGCAGTTTAAAGCGCCGCTCCCATCGTGCTGGGAAATGCACGGAG GTAATGTTTGGAAGAGTCATGTGTGATATTTAAGGCTTAGTGAGCAATGG TGGTTGGGTTTCCAGAGGATGGATGTACACCGACCGAGCTGACAGACTTG TGAAAATTCCTCAGTGCGAGTAGCCGTAATACAACTAGTTCACATTGAAG ATATATATTTTTGTTGTACTGTCTAAAAAGGGGAGAAACGAACAGTAGAT GGACATCACGGCATATAACAGCCGATCATCCTAATTGAGGATCGATCTAC TAATTGAGGATGAAGTATTTGAGATATAACTTTTGTTGATATGCCAAACG CAAGAAACCGAGGGCGGAAGATTATGCTTCTCCTCATTAGCTGTC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig5754:3675..13569+

>mRNA_H-paniculata_contig5754.13321.1 ID=mRNA_H-paniculata_contig5754.13321.1|Name=mRNA_H-paniculata_contig5754.13321.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2862bp|location=Sequence derived from alignment at H-paniculata_contig5754:3675..13569+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAGACCCCAGGAGCTTTCCTCACAATGAGGGTGGCTTCGAGATGAC
AATAGGCTCTAGGAAATCTGTATCTGGGACTAGAGGCACAGCAGCAGTTG
GGCAATTAGGGTTGGAGGATGCTCCCGCGAATGATCAAGAAACAATATAC
GCTAGCGGGACATCCTCAACAGCCGGTGCTGTGGCCAACTTCTTGAACTC
TATTGTAGGGGCTGGGATCGTAGGTCTGCCTTTCGCGTTGGCACAGATGG
AAGACCCCAGGAGCTTTCCTCACAATGAGGGTGGCTTCGAGATGACAATA
GGCTCTAGGAAATCTGTATCTGGGACTAGAGGCACAGCAGCAGTTGGGCA
ATTAGGGTTGGAGGATGCTCCCGCGAATGATCAAGAAACAATATACGCTA
GCGGGACATCCTCAACAGCCGGTGCTGTGGCCAACTTCTTGAACTCTATT
GTAGGGGCTGGGATCGTAGGTCTGCCTTTCGCGTTGGCACAGAGCGGCTT
GTGGGCGGGAATGTTCATGATCTGTCTCGCGGCGTTCCTAACCCACCACG
CCACGACGATGCTCATCTCGGCGGGGGAAAAGGCCAATCGTCTGAACTAT
GAGGAGCTCATGGCGCAGGTATTTGGCATCACCGGCTTCCATCTCTTCAA
TTTCTTCGCGGGGGTGTTAGCGTTCGGGGCCATGACGGCGTACCTTATCG
TGATCGGAGATACGGTGACTGAAATCGCCTTGGCCTCGGGAACCTCGAGC
TTGTTCACGAACCGCGTCAGTGTAGTCTCAATGCTCGGCACGCTGGTGAT
CCTGCCCGTGGCCAGTCTGAAGGACCTGGCCAAGCTGTCCTACACGTCGT
TCGTGAGCGTTATCGCGGACGTACTGCTGGTGTGCCTCGTGGTGTGGAAT
GGGCCCACGGAGAGCGAAGCGGCTTGTGGGCGGGAATGTTCATGATCTGT
CTCGCGGCGTTCCTAACCCACCACGCCACGACGATGCTCATCTCGGCGGG
GGAAAAGGCCAATCGTCTGAACTATGAGGAGCTCATGGCGCAGGTATTTG
GCATCACCGGCTTCCATCTCTTCAATTTCTTCGCGGGGGTGTTAGCGTTC
GGGGCCATGACGGCGTACCTTATCGTGATCGGAGATACGGTGACTGAAAT
CGCCTTGGCCTCGGGAACCTCGAGCTTGTTCACGAACCGCGTCAGTGTAG
TCTCAATGCTCGGCACGCTGGTGATCCTGCCCGTGGCCAGTCTGAAGGAC
CTGGCCAAGCTGTCCTACACGTCGTTCGTGAGCGTTATCGCGGACGTACT
GCTGGTGTGCCTCGTGGTGTGGAATGGGCCCACGGAGAGCGATGACGTCC
CCGGGATAGACCGATCAGAGACACTGCAGTTCATTCGACCCACGATTTTC
GCGGGCTTCGGAGCCATGTCGTTCGCTTTCGTGTGTCAGAGCTCCTCGTT
CTTGGTGTATCGGAGCATGGCCGTTAGGGGCGTCGAGAAGTGGAATCAGG
TGTCGAGAGTGGCTGTTTCCGCCGCCACGGCGATGGGCTTGGCGCTGTCC
TTCGCCGGCTACGCGAGCTTCGTGAACAAGACGGAAGGGAATATTCTCAA
CAATTTCTCGACGGACCATAAAGCCGCGAACGTGGCTCGAGGATTTCTTG
CCGTCACGATGTGACGTCCCCGGGATAGACCGATCAGAGACACTGCAGTT
CATTCGACCCACGATTTTCGCGGGCTTCGGAGCCATGTCGTTCGCTTTCG
TGTGTCAGAGCTCCTCGTTCTTGGTGTATCGGAGCATGGCCGTTAGGGGC
GTCGAGAAGTGGAATCAGGTGTCGAGAGTGGCTGTTTCCGCCGCCACGGC
GATGGGCTTGGCGCTGTCCTTCGCCGGCTACGCGAGCTTCGTGAACAAGA
CGGAAGGGAATATTCTCAACAATTTCTCGACGGACCATAAAGCCGCGAAC
GTGGCTCGAGGATTTCTTGCCGTCACGATGATTTTGACATACCCAATCGA
GATGTATGTGGCACGCCATGTCCTGGATGCTTCGGTGTTCCAGACTGTAC
TAGGCTTGGGGCCGATTACGTCCGTCCGCCACTACGGAATCACGTTGGGA
TTGTGGTTTCTGTCCATGATGCTAGCCGCGTCTACCAACTCGCTCGGAGA
TATCATGGAGATCTTCGGAGCATTTGCCGCGAGCATTTTGACATACCCAA
TCGAGATGTATGTGGCACGCCATGTCCTGGATGCTTCGGTGTTCCAGACT
GTACTAGGCTTGGGGCCGATTACGTCCGTCCGCCACTACGGAATCACGTT
GGGATTGTGGTTTCTGTCCATGATGCTAGCCGCGTCTACCAACTCGCTCG
GAGATATCATGGAGATCTTCGGAGCATTTGCCGCGAGCATGATCGGATAT
GTCATGCCGGCTATGTTGTACATACAAATCAATCGCGCGCAGCTGCGGGC
GGCCAAGGCGAAGTGGCGGCCTGGGTCTCCTCAGTACGAGAGCAGCTTGC
TCGAGCGACTATGGGCCATACGGAATTTTTTTCTTCCGTTCTTCATGGTC
GTCTTCGGCGTTATCGCCATGATAGCCGGCGTTGCTACTGCTGTGATTAC
GGAATTGTCTGTAACCAAGACATGAATGATCGGATATGTCATGCCGGCTA
TGTTGTACATACAAATCAATCGCGCGCAGCTGCGGGCGGCCAAGGCGAAG
TGGCGGCCTGGGTCTCCTCAGTACGAGAGCAGCTTGCTCGAGCGACTATG
GGCCATACGGAATTTTTTTCTTCCGTTCTTCATGGTCGTCTTCGGCGTTA
TCGCCATGATAGCCGGCGTTGCTACTGCTGTGATTACGGAATTGTCTGTA
ACCAAGACATGA
back to top