mRNA_H-paniculata_contig5751.13314.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5751.13314.1 vs. uniprot
Match: D7FYT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT8_ECTSI) HSP 1 Score: 187 bits (475), Expect = 3.010e-58 Identity = 94/119 (78.99%), Postives = 107/119 (89.92%), Query Frame = 1
Query: 4 FIQVDGVRRATPLLLVLLCIELSDVVFAVDSIPAVFAVTKDPFIVYTSNVWAILNLRSTFTLLANAVEDLPYLRPAVAIVLAFVGFKLGGEYFGYDISTEASLGIIFAILCSGVGISII 360
F VDGVRRATPLLLVL+C+ELSD+VFAVDSIPAVFAVTKDPFIVYTSN+WAILNLRS FTLLA+AVEDL YLRPAVA+VL FVG K+GG++FGYD+STE SLGII +L +GV S+I
Sbjct: 71 FTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAVVLGFVGCKIGGDFFGYDVSTELSLGIITGVLAAGVAASLI 189
BLAST of mRNA_H-paniculata_contig5751.13314.1 vs. uniprot
Match: A0A6H5LB61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB61_9PHAE) HSP 1 Score: 182 bits (461), Expect = 3.370e-54 Identity = 93/119 (78.15%), Postives = 105/119 (88.24%), Query Frame = 1
Query: 4 FIQVDGVRRATPLLLVLLCIELSDVVFAVDSIPAVFAVTKDPFIVYTSNVWAILNLRSTFTLLANAVEDLPYLRPAVAIVLAFVGFKLGGEYFGYDISTEASLGIIFAILCSGVGISII 360
F VDGVRRATPLLLVL+C+ELSD+VFAVDSIPAVFAVTKDPFIVYTSN+WAILNLRS FTLLA+AVEDL YLRPAVA VL FVG K+GGE+FGY++STE SL II +L +GV S+I
Sbjct: 226 FTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYNVSTELSLEIITGVLAAGVAASLI 344
BLAST of mRNA_H-paniculata_contig5751.13314.1 vs. uniprot
Match: A0A835YPV1_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV1_9STRA) HSP 1 Score: 161 bits (407), Expect = 1.060e-46 Identity = 83/121 (68.60%), Postives = 98/121 (80.99%), Query Frame = 1
Query: 4 FIQVDGVRRATPLLLVLLCIELSDVVFAVDSIPAVFAVTKDPFIVYTSNVWAILNLRSTFTLLANAVEDLPYLRPAVAIVLAFVGFKLGGEYFGYDISTEASLGIIFAILCSGVGISIISK 366
F VDG+RRATPLLLVL+C+E SD+VFAVDSIPAVF VTKDP IVY+SN++AILNLRS +T+L+ AV DL YLRPAVA+VLAFVG KLG EYF + T SLGII IL GVG+S+ +
Sbjct: 163 FTMVDGMRRATPLLLVLVCVEASDLVFAVDSIPAVFGVTKDPLIVYSSNIFAILNLRSLYTVLSTAVGDLVYLRPAVALVLAFVGLKLGAEYFSVTVDTVLSLGIISTILAGGVGLSLYER 283
BLAST of mRNA_H-paniculata_contig5751.13314.1 vs. uniprot
Match: A0A835YKR2_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR2_9STRA) HSP 1 Score: 162 bits (409), Expect = 2.550e-46 Identity = 82/119 (68.91%), Postives = 100/119 (84.03%), Query Frame = 1
Query: 4 FIQVDGVRRATPLLLVLLCIELSDVVFAVDSIPAVFAVTKDPFIVYTSNVWAILNLRSTFTLLANAVEDLPYLRPAVAIVLAFVGFKLGGEYFGYDISTEASLGIIFAILCSGVGISII 360
F VDGVRRATPLLLVL+C+ELSD+VFAVDSIPAVF T+DPF+VYTSN++AI+NLRS +T+L+NAV DL YLRPAVA VLAFVG KL EYFGY++ T SLG+I +L GV +S++
Sbjct: 231 FTMVDGVRRATPLLLVLVCVELSDLVFAVDSIPAVFGCTRDPFLVYTSNIFAIVNLRSLYTVLSNAVGDLEYLRPAVAGVLAFVGAKLAAEYFGYEVDTLLSLGVISTLLGGGVALSLL 349
BLAST of mRNA_H-paniculata_contig5751.13314.1 vs. uniprot
Match: A0A7S2V8N4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N4_9STRA) HSP 1 Score: 162 bits (409), Expect = 3.350e-46 Identity = 80/121 (66.12%), Postives = 102/121 (84.30%), Query Frame = 1
Query: 4 FIQVDGVRRATPLLLVLLCIELSDVVFAVDSIPAVFAVTKDPFIVYTSNVWAILNLRSTFTLLANAVEDLPYLRPAVAIVLAFVGFKLGGEYFGYDISTEASLGIIFAILCSGVGISIISK 366
F VDGV+ ATPLLL L+C+ELSD+VFAVDS+PAVF VTKDPFIVYTSN++AIL LRS +T+L+ AV +L YL+PAV IVL F+G KLG EY+GY+IST SLG++ A+L GVG+S+++K
Sbjct: 250 FTVVDGVKVATPLLLCLVCVELSDIVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLSKAVSELDYLQPAVGIVLGFIGSKLGLEYYGYEISTGVSLGVVAALLGGGVGLSVLTK 370
BLAST of mRNA_H-paniculata_contig5751.13314.1 vs. uniprot
Match: W7U074_9STRA (Integral membrane protein TerC n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U074_9STRA) HSP 1 Score: 157 bits (396), Expect = 5.120e-44 Identity = 81/122 (66.39%), Postives = 100/122 (81.97%), Query Frame = 1
Query: 4 FIQVDGVRR-ATPLLLVLLCIELSDVVFAVDSIPAVFAVTKDPFIVYTSNVWAILNLRSTFTLLANAVEDLPYLRPAVAIVLAFVGFKLGGEYFGYDISTEASLGIIFAILCSGVGISIISK 366
F +V G R ATPLLLVL+C+ELSDVVFAVDS+PAVF VTKDPFIVYTSN++AIL LRS +T+LANA+ DLPYL+PAVA++L VG KLG EYFG+++S SLG+I ++L SGV S+ K
Sbjct: 274 FTEVPGQGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGLKLGAEYFGFEVSNAVSLGVITSLLGSGVWASLYLK 395
BLAST of mRNA_H-paniculata_contig5751.13314.1 vs. uniprot
Match: A0A7S2FP03_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FP03_9STRA) HSP 1 Score: 152 bits (384), Expect = 6.690e-44 Identity = 74/117 (63.25%), Postives = 97/117 (82.91%), Query Frame = 1
Query: 16 DGVRRATPLLLVLLCIELSDVVFAVDSIPAVFAVTKDPFIVYTSNVWAILNLRSTFTLLANAVEDLPYLRPAVAIVLAFVGFKLGGEYFGYDISTEASLGIIFAILCSGVGISIISK 366
DGVR+ATPLLL L+C+ELSD+VFAVDS+PAVF VTKDPFIV+TSN++AI++LRS +T+++NAV DL YL+PAV +VLAFVG KLG YF Y+IS SLG+I +L G+ +S+ +
Sbjct: 120 DGVRKATPLLLALICLELSDLVFAVDSVPAVFGVTKDPFIVFTSNLFAIVSLRSLYTIISNAVNDLKYLQPAVGLVLAFVGAKLGAGYFDYEISNLISLGVISTLLSGGIALSLYER 236
BLAST of mRNA_H-paniculata_contig5751.13314.1 vs. uniprot
Match: A0A6V3AJS8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3AJS8_HETAK) HSP 1 Score: 151 bits (381), Expect = 4.410e-42 Identity = 74/121 (61.16%), Postives = 93/121 (76.86%), Query Frame = 1
Query: 4 FIQVDGVRRATPLLLVLLCIELSDVVFAVDSIPAVFAVTKDPFIVYTSNVWAILNLRSTFTLLANAVEDLPYLRPAVAIVLAFVGFKLGGEYFGYDISTEASLGIIFAILCSGVGISIISK 366
F VDGVR+ATPL + L+ +ELSD+ FAVDS+PAVF VT DPFIVYTSN++AIL LRS FT+LA V DLPYL PAV +VL F+G KLG +YFGY+I + SL ++ A L G+G S++ K
Sbjct: 239 FTVVDGVRKATPLFVCLMSVELSDIAFAVDSVPAVFGVTTDPFIVYTSNLFAILGLRSLFTVLAKLVADLPYLEPAVGVVLGFIGAKLGAQYFGYEIPSAVSLEVVLACLAGGIGASLLLK 359
BLAST of mRNA_H-paniculata_contig5751.13314.1 vs. uniprot
Match: A0A7S2Y1S8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1S8_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.240e-41 Identity = 75/119 (63.03%), Postives = 97/119 (81.51%), Query Frame = 1
Query: 4 FIQVDGVRRATPLLLVLLCIELSDVVFAVDSIPAVFAVTKDPFIVYTSNVWAILNLRSTFTLLANAVEDLPYLRPAVAIVLAFVGFKLGGEYFGYDISTEASLGIIFAILCSGVGISII 360
F +V+GVR ATPLL+ L+CIELSD VFAVDSIPAV VTKDPFIVY+SN++AI+ LRS + L+A AV DLPYLRPAVA+VLAFVG K+ E+F Y++ST SL ++ A+L G+ +S++
Sbjct: 230 FTKVNGVRHATPLLMCLVCIELSDFVFAVDSIPAVIGVTKDPFIVYSSNMFAIMALRSLYVLVAQAVTDLPYLRPAVALVLAFVGAKMIAEFFHYELSTAISLAVVAAVLGGGIALSVV 348
BLAST of mRNA_H-paniculata_contig5751.13314.1 vs. uniprot
Match: A0A0V0HKY7_SOLCH (Putative ovule protein n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0HKY7_SOLCH) HSP 1 Score: 142 bits (358), Expect = 5.700e-41 Identity = 68/117 (58.12%), Postives = 96/117 (82.05%), Query Frame = 1
Query: 16 DGVRRATPLLLVLLCIELSDVVFAVDSIPAVFAVTKDPFIVYTSNVWAILNLRSTFTLLANAVEDLPYLRPAVAIVLAFVGFKLGGEYFGYDISTEASLGIIFAILCSGVGISIISK 366
DGVR+ATPLLL + IELSD+ FAVDSIPAVF VT+DPFIV+TSN++AIL LRS +TL++ ++ +L YL+P++ +VL F+GFK+ ++FGY +STEASLG++ L +GV +S++ K
Sbjct: 42 DGVRKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFTSNLFAILGLRSLYTLISESMGELEYLQPSIGVVLGFIGFKMILDFFGYHVSTEASLGVVATCLSTGVLLSLVKK 158 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5751.13314.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5751.13314.1 >prot_H-paniculata_contig5751.13314.1 ID=prot_H-paniculata_contig5751.13314.1|Name=mRNA_H-paniculata_contig5751.13314.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp LFIQVDGVRRATPLLLVLLCIELSDVVFAVDSIPAVFAVTKDPFIVYTSNback to top mRNA from alignment at H-paniculata_contig5751:2513..3467+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5751.13314.1 ID=mRNA_H-paniculata_contig5751.13314.1|Name=mRNA_H-paniculata_contig5751.13314.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=955bp|location=Sequence derived from alignment at H-paniculata_contig5751:2513..3467+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5751:2513..3467+ >mRNA_H-paniculata_contig5751.13314.1 ID=mRNA_H-paniculata_contig5751.13314.1|Name=mRNA_H-paniculata_contig5751.13314.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=738bp|location=Sequence derived from alignment at H-paniculata_contig5751:2513..3467+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |