mRNA_H-paniculata_contig575.13311.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig575.13311.1
Unique NamemRNA_H-paniculata_contig575.13311.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig575.13311.1 vs. uniprot
Match: D8LKC5_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKC5_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 1.120e-113
Identity = 163/182 (89.56%), Postives = 173/182 (95.05%), Query Frame = 3 
Query:  369 QLRMARDPDASIALPFTPRPEKLNGELVGDVGFDPLNFSEEGDLKKYRRAELKHGRVAMLAVVGTIWQEYSVLPGLGYSPTKNLFQAVADAPWIAILQIFIFVGIFDLQSTKYDMEQGRVPGDIGFDPLKLSADGINEKWALAELKHGRLAMWAMAAILIQQLLVPDKSPLELAFEWSTQFN 914
            Q+ MA DPDASIALPFTPRPE LNGELVGDVGFDPLNFSEEGDL KYRRAELKHGRVAML VVG IWQE+SVLPGLGY+PTKNLFQAVADAPW+A+LQ+ +FVGIFDLQSTKYD+EQGRVPGDIGFDPLKLS DGINEKWALAELKHGRLAMWAMAAILIQQLLVPDKSPLEL +EWSTQF+
Sbjct:   35 QVSMAADPDASIALPFTPRPENLNGELVGDVGFDPLNFSEEGDLAKYRRAELKHGRVAMLGVVGAIWQEFSVLPGLGYTPTKNLFQAVADAPWLAVLQVVVFVGIFDLQSTKYDIEQGRVPGDIGFDPLKLSKDGINEKWALAELKHGRLAMWAMAAILIQQLLVPDKSPLELTYEWSTQFH 216
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BLAST of mRNA_H-paniculata_contig575.13311.1 vs. uniprot
Match: A0A835YVN7_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN7_9STRA)

HSP 1 Score: 230 bits (586), Expect = 4.870e-68
Identity = 110/175 (62.86%), Postives = 135/175 (77.14%), Query Frame = 3 
Query:  387 DPDASIALPFTPRPEKLNGELVGDVGFDPLNFSEEGDLKKYRRAELKHGRVAMLAVVGTIWQEYSVLPGLGYSPTKNLFQAVADAPWIAILQIFIFVGIFDLQSTKYDMEQGRVPGDIGFDPLKLSADGINEKWALAELKHGRLAMWAMAAILIQQLLVPDKSPLELAFEWSTQF 911
            D + S++LPF  +P  LNGELVGDVGFDPL FS++GDL K+RRAELKHGRVAML V+G+I QE   + G  +  TKNLF AV DA  +A+LQ+F FVG +D+ +TK++   GRVPGDIGFDPL+LS DGINE WAL+ELKHGRLAM AM A LIQ L+ P+KS LE  F+W+  F
Sbjct:   44 DDERSVSLPFAAKPANLNGELVGDVGFDPLRFSDKGDLAKFRRAELKHGRVAMLGVLGSILQESYSVQGPDFKTTKNLFAAVTDAGPLALLQVFAFVGAYDVATTKWEEANGRVPGDIGFDPLRLSKDGINETWALSELKHGRLAMIAMFAFLIQTLVEPNKSILEQTFDWARSF 218
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BLAST of mRNA_H-paniculata_contig575.13311.1 vs. uniprot
Match: A0A7S1U1W6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1W6_9STRA)

HSP 1 Score: 187 bits (476), Expect = 3.050e-52
Identity = 94/181 (51.93%), Postives = 119/181 (65.75%), Query Frame = 3 
Query:  360 GLDQLRMARDPDASIALPFTPRPEKLNGELVGDVGFDPLNFSEEGDLKKYRRAELKHGRVAMLAVVGTIWQEYSVLPGLGYSPTKNLFQAVADAPWIAILQIFIFVGIFDLQSTKYDMEQGRVPGDIGFDPLKLSADGINEKWALAELKHGRLAMWAMAAILIQQLLVPDKSPLELAFEWS 902
            G  Q+ MA D  A  A+PF  +PE LNGEL GD+GFDP  FS+  DL   R AELKHGRV MLA  G + QE + L      P+ N  +A+  AP + I+QI + +G  + Q++ Y    GRVPGD GFDPLKLS +GINEKWAL ELKHGRLAMWA A +L+Q L+ PD   ++  F+W+
Sbjct:   24 GRGQMAMAADKSA--AIPFADKPENLNGELAGDIGFDPFRFSDSRDLAYLREAELKHGRVCMLAATGILTQEVTRLSDA--FPSTNCLEALKTAPTLGIIQIILVIGALEAQNSNY---VGRVPGDRGFDPLKLSENGINEKWALMELKHGRLAMWATAGMLVQTLVNPDVPIIQQTFDWA 197
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BLAST of mRNA_H-paniculata_contig575.13311.1 vs. uniprot
Match: W7TNE9_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNE9_9STRA)

HSP 1 Score: 184 bits (468), Expect = 7.490e-47
Identity = 92/166 (55.42%), Postives = 121/166 (72.89%), Query Frame = 3 
Query:  399 SIALPFTPRPEKLNGELVGDVGFDPLNFSEEGDLKKYRRAELKHGRVAMLAVVGTIWQEYSVLPGLGYSPTKNLFQAVADAPWIAILQIFIFVGIFDLQSTKYDMEQGRVPGDIGFDPLKLSADGINEKWALAELKHGRLAMWAMAAILIQQLLVPDKSPLELAFE 896
            SIALPF  +P+ LNGEL GDVGFDP  FS++GD+ K+R AELKHGRVAMLAVVG + QE  +       P+KN  +A+  AP + +LQ+F+F+G +D+ ++K++   GRVPGDIGFDPL+LSADG+ E W +AELKHGRLAM A  A ++Q   + DK  LE  F+
Sbjct:   44 SIALPFAAKPQNLNGELAGDVGFDPFKFSDKGDVAKFRVAELKHGRVAMLAVVGVLVQE--LYQWNENFPSKNFLEALKTAPALGLLQLFVFLGAYDVTTSKFE---GRVPGDIGFDPLRLSADGLRENWQVAELKHGRLAMIAFLAFVVQAS-ISDKPILEQTFD 203
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BLAST of mRNA_H-paniculata_contig575.13311.1 vs. uniprot
Match: K8YRV9_NANGC (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRV9_NANGC)

HSP 1 Score: 172 bits (437), Expect = 1.240e-46
Identity = 87/171 (50.88%), Postives = 115/171 (67.25%), Query Frame = 3 
Query:  399 SIALPFTPRPEKLNGELVGDVGFDPLNFSEEGDLKKYRRAELKHGRVAMLAVVGTIWQEYSVLPGLGYSPTKNLFQAVADAPWIAILQIFIFVGIFDLQSTKYDMEQGRVPGDIGFDPLKLSADGINEKWALAELKHGRLAMWAMAAILIQQLLVPDKSPLELAFEWSTQF 911
            SIALPF  +P+ LNGEL GDVGFDP  FS++GD+ K+R AELKH  V +L      W E          P+KN  +A+  AP + +LQ+F+F+G +D+ ++K++   GRVPGDIGFDPL+LSADG+ E W +AELKHGRLAM A  A ++Q   + DK  LE  FEW+  F
Sbjct:   44 SIALPFAAKPQNLNGELAGDVGFDPFKFSDKGDVAKFRVAELKH--VGVLVQELYQWNENF--------PSKNFLEALKTAPALGLLQLFVFLGAYDVTTSKFE---GRVPGDIGFDPLRLSADGLRENWQVAELKHGRLAMIAFLAFVVQAS-ISDKPILEQTFEWAKSF 200
[Close]
BLAST of mRNA_H-paniculata_contig575.13311.1 vs. uniprot
Match: A0A0G4GWW0_VITBC (Uncharacterized protein n=3 Tax=Sar TaxID=2698737 RepID=A0A0G4GWW0_VITBC)

HSP 1 Score: 164 bits (414), Expect = 5.770e-43
Identity = 80/180 (44.44%), Postives = 111/180 (61.67%), Query Frame = 3 
Query:  384 RDPDASIALPFTPRPEKLNGELVGDVGFDPLNFSEEGDLKKYRRAELKHGRVAMLAVVGTIWQEYSVLPGLGYSPTKNLFQAVADAPWIAILQIFIFVGIFDLQSTKYDMEQGRVPGDIGFDPLKLSADGINEKWALAELKHGRLAMWAMAAILIQQLLVPDKSPLELAFEWSTQFN*GR 923
            +D + S+ALPF  +P+ LNGELVGDVGFDP  F+   DL + R  ELKHGRV MLA +G + Q  S        P+KN  +A   AP + ++Q+ + +   +  +  +    GR+PGD GFDPL+LS +GI E W L ELKHGRLAM     +++QQLL PD+S +E+   W+     G+
Sbjct:   45 QDIEKSVALPFARKPDNLNGELVGDVGFDPFGFTNNQDLARMREVELKHGRVCMLATLGVLVQ--STYRWNEAFPSKNFLEAPLTAPTLGMIQLLLVISAIEYYNGNF---VGRIPGDRGFDPLRLSREGIRENWQLMELKHGRLAMIGFLGMVVQQLLRPDESIVEMTINWAKTLGEGQ 219
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BLAST of mRNA_H-paniculata_contig575.13311.1 vs. uniprot
Match: A0A8J5XNK9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XNK9_DIALT)

HSP 1 Score: 151 bits (381), Expect = 1.160e-38
Identity = 82/178 (46.07%), Postives = 108/178 (60.67%), Query Frame = 3 
Query:  372 LRMARDPDASIALPFTPRPEKLNGELVGDVGFDPLNFSEEGD---LKKYRRAELKHGRVAMLAVVGTIWQEYSVLPGLGYSPTKNLFQAVADAPWIAILQIFIFVGIFDLQSTKYDMEQGRVPGDIGFDPLKLSADGINEKWALAELKHGRLAMWAMAAILIQQLLVPDKSPLELAFE 896
            +RM  + D S A+PF  +P+ LNGEL+ D+GFDP  F+ +     + K+R AELKHGRV MLAV+G + QE             N   A+A  P + ILQI +  GI + ++  Y    GR+PGDIGFDPL LSA GI E WA+AE+KHGRLAM A  A  +Q + V  +S L   F+
Sbjct:   26 VRMVTEDDLSAAIPFVAKPKNLNGELLCDIGFDPAGFTNKASPEKIAKFREAELKHGRVCMLAVLGFVAQELIAPYQAAPFNEVNPINAIAAVPALGILQIIVLCGIIENRTQGY---AGRIPGDIGFDPLGLSAGGIKEDWAIAEIKHGRLAMIAFLAFQVQ-IKVSGESVLSTTFD 199
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BLAST of mRNA_H-paniculata_contig575.13311.1 vs. uniprot
Match: A0A0G4FN06_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FN06_9ALVE)

HSP 1 Score: 142 bits (359), Expect = 7.840e-35
Identity = 69/156 (44.23%), Postives = 100/156 (64.10%), Query Frame = 3 
Query:  435 LNGELVGDVGFDPLNFSEEGDLKKYRRAELKHGRVAMLAVVGTIWQEYSVLPGLGYSPTKNLFQAVADAPWIAILQIFIFVGIFDLQSTKYDMEQGRVPGDIGFDPLKLSADGINEKWALAELKHGRLAMWAMAAILIQQLLVPDKSPLELAFEWS 902
              G+L GD+G+DPLN +E GD+ + R AEL+HGR+AMLA +G + Q         + P+KN   A+  AP + I QIF  +G ++ ++  Y+   GR+PGD GFDPL LS +GI  +W  +EL+HGRLAM+    +L+QQLL P +S +E    W+
Sbjct:   92 FGGDLAGDLGWDPLNLAEGGDIVQLREAELRHGRLAMLATLGVLVQSTYRWDSENF-PSKNFLDALFTAPPLGIFQIFAAIGWWEFKNKDYE---GRIPGDRGFDPLGLSKNGIRPQWEKSELEHGRLAMFMFLGMLVQQLLSPKESIVEQTISWT 243
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BLAST of mRNA_H-paniculata_contig575.13311.1 vs. uniprot
Match: A0A7S0QK90_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QK90_9CRYP)

HSP 1 Score: 136 bits (343), Expect = 4.820e-33
Identity = 76/171 (44.44%), Postives = 105/171 (61.40%), Query Frame = 3 
Query:  393 DASIALPFTPRPEKLNGELVGDVGFDPLNFSEEGDLKKYRRAELKHGRVAMLAVVGTIWQEYSVLPGLGYSPTKNLFQAVADAPWIAILQIFIFVGIFDLQSTKYDM-------EQGRVPGDIGFDPLKLSAD-GINEKWALAELKHGRLAMWAMAAILIQQLLVPDKSPL 881
            D S A+PF  RPEKL+G L GDVGFDPL  S   D+K  R +ELKHGR+ MLA  G + QE+  LPG  +S  K   +A + AP   ++QI + +G+ +L S ++ M       +  R PG++GFDPL LSAD     ++ LAELKH RLAM A+   + Q ++   K+P+
Sbjct:   48 DKSKAVPFLSRPEKLDGTLAGDVGFDPLGLSNYWDIKWMRESELKHGRICMLATAGILVQEFVHLPGAAFSK-KVALEAWSSAPRGGMIQILVAIGLIELVSNRFAMTATDMFADPNRKPGNLGFDPLNLSADESALRRYELAELKHSRLAMIAIGGFVHQAIIT--KTPV 215
[Close]
BLAST of mRNA_H-paniculata_contig575.13311.1 vs. uniprot
Match: A0A7S1TZN6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZN6_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.100e-32
Identity = 66/129 (51.16%), Postives = 86/129 (66.67%), Query Frame = 3 
Query:  516 AELKHGRVAMLAVVGTIWQEYSVLPGLGYSPTKNLFQAVADAPWIAILQIFIFVGIFDLQSTKYDMEQGRVPGDIGFDPLKLSADGINEKWALAELKHGRLAMWAMAAILIQQLLVPDKSPLELAFEWS 902
            AELK GRV MLA  G + QE + L      P+ N  +A+  AP + I+QI + +G  + Q++ Y    GRVPGD GFDPLKLS +GINEKWAL ELKHGRLAMWA A +L+Q L+ PD   ++  F+W+
Sbjct:    9 AELKQGRVCMLAATGILTQEVTRLSDA--FPSTNCLEALKTAPTLGIIQIILVIGALEAQNSNY---VGRVPGDRGFDPLKLSENGINEKWALMELKHGRLAMWATAGMLVQTLVNPDVPIIQQTFDWA 132
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig575.13311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKC5_ECTSI1.120e-11389.56Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A835YVN7_9STRA4.870e-6862.86Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A7S1U1W6_9STRA3.050e-5251.93Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TNE9_9STRA7.490e-4755.42DNA-directed RNA polymerase subunit n=1 Tax=Nannoc... [more]
K8YRV9_NANGC1.240e-4650.88Light-harvesting protein n=2 Tax=Monodopsidaceae T... [more]
A0A0G4GWW0_VITBC5.770e-4344.44Uncharacterized protein n=3 Tax=Sar TaxID=2698737 ... [more]
A0A8J5XNK9_DIALT1.160e-3846.07Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A0G4FN06_9ALVE7.840e-3544.23Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S0QK90_9CRYP4.820e-3344.44Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S1TZN6_9STRA1.100e-3251.16Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig575contigH-paniculata_contig575:31294..34603 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.0
Seed ortholog evalue1.7e-93
Seed eggNOG ortholog2880.D8LKC5
Preferred nameLHCA1
KEGG koko:K08907
KEGG Pathwayko00196,map00196
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009314,GO:0009409,GO:0009416,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009637,GO:0009639,GO:0009642,GO:0009644,GO:0009645,GO:0009765,GO:0009768,GO:0009941,GO:0009987,GO:0010114,GO:0010218,GO:0010287,GO:0015979,GO:0016020,GO:0016168,GO:0019684,GO:0019904,GO:0031409,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046906,GO:0048037,GO:0050896,GO:0055035,GO:0097159,GO:1901363
EggNOG free text desc.photosynthesis, light harvesting
EggNOG OGs28MEX@1,2QTYF@2759
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-01_009740.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Exons4
Model size1889
Cds size681
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig575.13311.1prot_H-paniculata_contig575.13311.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig575 31530..33631 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930620.2222548-UTR-H-paniculata_contig575:31293..315291622930620.2222548-UTR-H-paniculata_contig575:31293..31529Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig575 31294..31529 +
1691481375.7449055-UTR-H-paniculata_contig575:31293..315291691481375.7449055-UTR-H-paniculata_contig575:31293..31529Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig575 31294..31529 +
1622930620.2999015-UTR-H-paniculata_contig575:33631..346031622930620.2999015-UTR-H-paniculata_contig575:33631..34603Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig575 33632..34603 +
1691481375.7936263-UTR-H-paniculata_contig575:33631..346031691481375.7936263-UTR-H-paniculata_contig575:33631..34603Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig575 33632..34603 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930620.2352467-CDS-H-paniculata_contig575:31529..315821622930620.2352467-CDS-H-paniculata_contig575:31529..31582Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig575 31530..31582 +
1691481375.7570474-CDS-H-paniculata_contig575:31529..315821691481375.7570474-CDS-H-paniculata_contig575:31529..31582Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig575 31530..31582 +
1622930620.2548647-CDS-H-paniculata_contig575:31633..318351622930620.2548647-CDS-H-paniculata_contig575:31633..31835Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig575 31634..31835 +
1691481375.7654274-CDS-H-paniculata_contig575:31633..318351691481375.7654274-CDS-H-paniculata_contig575:31633..31835Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig575 31634..31835 +
1622930620.2671087-CDS-H-paniculata_contig575:32698..328691622930620.2671087-CDS-H-paniculata_contig575:32698..32869Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig575 32699..32869 +
1691481375.7742574-CDS-H-paniculata_contig575:32698..328691691481375.7742574-CDS-H-paniculata_contig575:32698..32869Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig575 32699..32869 +
1622930620.2855227-CDS-H-paniculata_contig575:33376..336311622930620.2855227-CDS-H-paniculata_contig575:33376..33631Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig575 33377..33631 +
1691481375.7834234-CDS-H-paniculata_contig575:33376..336311691481375.7834234-CDS-H-paniculata_contig575:33376..33631Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig575 33377..33631 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig575.13311.1

>prot_H-paniculata_contig575.13311.1 ID=prot_H-paniculata_contig575.13311.1|Name=mRNA_H-paniculata_contig575.13311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=227bp
MCVCFLFLLSSSQRDFIVIQPYSQLICCTLFTRLFFCGGYIGLDQLRMAR
DPDASIALPFTPRPEKLNGELVGDVGFDPLNFSEEGDLKKYRRAELKHGR
VAMLAVVGTIWQEYSVLPGLGYSPTKNLFQAVADAPWIAILQIFIFVGIF
DLQSTKYDMEQGRVPGDIGFDPLKLSADGINEKWALAELKHGRLAMWAMA
AILIQQLLVPDKSPLELAFEWSTQFN*
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mRNA from alignment at H-paniculata_contig575:31294..34603+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig575.13311.1 ID=mRNA_H-paniculata_contig575.13311.1|Name=mRNA_H-paniculata_contig575.13311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3310bp|location=Sequence derived from alignment at H-paniculata_contig575:31294..34603+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTGAGTCCAAGAGGAGCTTGTCAGTTGCCAAGAATACATGACGACA
GCAGTTGTGAAGAAACGGAGCACTCAAACCTCGCATGTGCCAGACGTCTG
TACATGCCACTTACGACAACTTGGTTATAGGCTGTTGAAATAATTAATAG
TATAAATAGTCGATTTAGATCCGTCATCACTACATGCGACCATTTATCAA
CCGGTCCCCATTTCGCCTTGACCAACCGTGAGGCAAATGTGTGTATGCTT
CCTGTTCCTGTTGTCAAGCTCGCAAAGAGACTTCATCGTGTTCATGTTTC
GATGGACCTGCTCTCTTTTGAGTTGTACCCCCGCTTACAGTATCCAACCG
TACAGTCAGTTGATCTGTTGCACCCTTTTCACTCGGCTGTTCTTCTGTGG
GGGTTATATTGGGCTGGATCAGCTGAGGATGGCGAGGGACCCCGACGCGT
CCATCGCGCTGCCCTTCACACCGCGGCCGGAGAAGCTGAATGGCGAACTT
GTGGGAGACGTTGGATTCGACCCGTTGAACTTCAGCGAAGAGGTGCGCGC
TGAGGGGGTAGTCGCTTGCGTTCGTCTCGCCGTTTTAACAATCGGCCTGT
TTTGGTTCAAGGATGGGTGGTGAATACCCGTGTTGAATGCCGACTATCTC
GACTTTTGAGTTGAACAACAGCCTTAAACATGTACCTGAGGGGGGACCCA
ACCGAACTCTTGCAGCTTGAAAGTTCTAATCTAAAATTGTCTGAGTTTTC
TACGAAAGACAATGTTGACGTGTATCGAATGAACTTTCATCATGCACCTA
CTGGTGCCGCTTTCCACATATGTCATTGTACCTCGTGTTCCTATTCAGCA
CATGACATAAACTTCGTAGAAACGCTGGTCATGTTTTAATGTATCCCTCA
GCCTTGACCCCGTAAGTAATTGCGAGTCGGGAAGAAACGAGGTGTGGGCC
TGGATGATTCCGGTTCAGTCAAGCTGTACTGTTCAGTGCAACTGTACTGG
CGAGATGCCTATCTATTCCAAGTCTAACCACAACAATACCGATTGTCATG
TTGCAGTTTTACAGCGTTGGCAGCTGAAGTGTAGGTTGCGATGGGTGGTC
CATTATCAGGAATTAAGGAGATTTGTACAAATCTCCTTTCGAGGGGTCGA
GCTGGTTATACGTGGTCTTTGGAAACGTACACCTTTTTGTGTGACTGTAC
CTCTGACAAGTAAGGACGTGTATACTCGGGTCCGCCCTCATTATACTACG
GGGAGATATCGAAACTATTGTCCGATACTCGAGGTTTGTGCCTGATACAC
CTGCATGTTTCGTCTCTCAACGCATGTGCCCTTTCACCGATACCTACATG
ATGCTGATCTTGGTTGTGGTGTTTTATGTCACATCGCTTCTTTCTTGTGT
TGAAGGGCGACCTCAAGAAGTACCGTAGGGCAGAGCTGAAGCACGGCCGC
GTAGCCATGCTCGCCGTTGTGGGCACTATCTGGCAAGAGTACAGCGTTTT
GCCCGGATTGGGTTACTCGCCGACCAAGAACCTGTTCCAAGCGGTTGCGG
ATGCGCCGTGGATCGCTATTCTCCAGGTGAGATGCATCGAATAGCGAGGC
CGTATTTTGTTGATGGTTTCGTGAATATCCAGGATATGTTTGCTCCTAAC
TGGTACCGTGGCCAACACACTAGCGGATTGTACACGACCTGACCGAAGAA
GCTGTGAGATTTTGTGGATATTTATTACTATCCAGTCAGAGGCGTGTGAA
TCATTGCCCCCACGAGGTCAGGGCAAAATCAACAATCATTACATTCTAGC
TCGAAAAACCTGGAGTGGTGGGCATAACTAACTTGATCTTCACTCCTTTT
TTGTGTCGAGTGTAAGCGTACTGTCGGATATGTTGACCATACCCGAAGTG
TTCGACCCGACCTCTAACCGTTCATGTAGACTCGGAATTGTACTACTTGT
CTGGTGTCACAGTGCGGGCGTTCTGGCTACACGAAAAGATGAAACGATCA
CCGCTGCTAGATTACTCTCCTCTTCGCGAGGTGTGATCACTTACTGACAA
GGTGCCCCCTTTTTCATGGTGTGTTTTTCCCAGATATTCATCTTCGTAGG
CATCTTTGATCTCCAGAGCACCAAGTACGACATGGAGCAGGGACGCGTAC
CCGGTGACATTGGATTCGACCCCCTCAAGCTTTCCGCGGATGGAATCAAT
GAGAAGTGGGCGCTTGCAGAGCTCAAGCACGGTCGTCTTGCCATGTGGGC
GATGGCAGCAATCCTTATCCAACAGCTCCTCGTCCCCGACAAGTCACCGC
TCGAACTTGCGTTCGAGTGGTCGACGCAGTTCAACTAAGGCCGGATCAAC
GGACTACGATAGTAGAAACGGGATGACGTGAAGGGACTCTTTTCTCTAGT
GTTCCCAGTGTAGAGGAAACAGGAGATGCCGCTTTCTTGTTACACTATCA
GGGTGTCATCTTTTGTCCTGCAGTAGATTGGACTGGATGTCTTCCTGTTG
GGTGCGTGTCTAGTGAGCATCGTTCTTGCCTAAACCGTGAGGGCACATGA
GCCGAGAATCGGTGAACGCCAATTTTTTGCAGTTGGCGTGAGAATGATGG
GGTACCTCCTGCTTCTAAGGCGTCATCATTTTGTCTGAATTCCGCCTCGC
AGACAGGAGGTGTCTTTTTTTTTGTCGTACTTGCAAGGACGGTCATTTTT
ACGTGGCGCGGTAGAGTTCGCTGATTCGATAAAGCCCCGAAAGGTCTTTA
ATTGGGTATACTAGAAGGCTCTAATGGTAACCGTAGTACGGGAGTTAGAA
GAGTTTAGGCCGCTTCTCGAGGCTGGATTACATTTACCGTCTCACACCGT
CTCGAGTGCCCCCCCGAAAATTTTAGTCTCACCTGCTTGGTCTTGTAACG
CACGTATGCCTTTTTAATATAGATGAGCGTGAGTGCGTACGTGATGAGGC
AGTAGTTCAAGTCGAGTCTGTTGTCGTGTACTGCCGATCCACTGTTCGAA
GGGAGGGCGCGTTTGTGTCGTGCGTGACTTCCGCATTTAAAAGCATCCAG
CTGTGGTGCACTAAATCATCGCCCGTCCTTCGAAATAACTTCATCGAATT
TGTTTCTACAAAATTATTTCTCTGTGGCTTGAAATGAACAGTGTGGTCCT
TGGAGTTGCGAATCTCTCTAAATGCTGTTGAACAGATCAGGAAGTGGCCT
CGCACATTCAGGTTAGATTCCAACGTTCCAAAAAAACGTTTAGCTATTGC
CAAGTGCATCTGCTAATAATTCTTTTGCACATCACCTCATTGCCCACGCC
TCGAAGGACA
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Coding sequence (CDS) from alignment at H-paniculata_contig575:31294..34603+

>mRNA_H-paniculata_contig575.13311.1 ID=mRNA_H-paniculata_contig575.13311.1|Name=mRNA_H-paniculata_contig575.13311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1362bp|location=Sequence derived from alignment at H-paniculata_contig575:31294..34603+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTGTGTATGCTTCCTGTTCCTGTTGTCAAGCTCGCAAAGAGACTTCAT
CGTATGTGTGTATGCTTCCTGTTCCTGTTGTCAAGCTCGCAAAGAGACTT
CATCGTTATCCAACCGTACAGTCAGTTGATCTGTTGCACCCTTTTCACTC
GGCTGTTCTTCTGTGGGGGTTATATTGGGCTGGATCAGCTGAGGATGGCG
AGGGACCCCGACGCGTCCATCGCGCTGCCCTTCACACCGCGGCCGGAGAA
GCTGAATGGCGAACTTGTGGGAGACGTTGGATTCGACCCGTTGAACTTCA
GCGAAGAGTATCCAACCGTACAGTCAGTTGATCTGTTGCACCCTTTTCAC
TCGGCTGTTCTTCTGTGGGGGTTATATTGGGCTGGATCAGCTGAGGATGG
CGAGGGACCCCGACGCGTCCATCGCGCTGCCCTTCACACCGCGGCCGGAG
AAGCTGAATGGCGAACTTGTGGGAGACGTTGGATTCGACCCGTTGAACTT
CAGCGAAGAGGGCGACCTCAAGAAGTACCGTAGGGCAGAGCTGAAGCACG
GCCGCGTAGCCATGCTCGCCGTTGTGGGCACTATCTGGCAAGAGTACAGC
GTTTTGCCCGGATTGGGTTACTCGCCGACCAAGAACCTGTTCCAAGCGGT
TGCGGATGCGCCGTGGATCGCTATTCTCCAGGGCGACCTCAAGAAGTACC
GTAGGGCAGAGCTGAAGCACGGCCGCGTAGCCATGCTCGCCGTTGTGGGC
ACTATCTGGCAAGAGTACAGCGTTTTGCCCGGATTGGGTTACTCGCCGAC
CAAGAACCTGTTCCAAGCGGTTGCGGATGCGCCGTGGATCGCTATTCTCC
AGATATTCATCTTCGTAGGCATCTTTGATCTCCAGAGCACCAAGTACGAC
ATGGAGCAGGGACGCGTACCCGGTGACATTGGATTCGACCCCCTCAAGCT
TTCCGCGGATGGAATCAATGAGAAGTGGGCGCTTGCAGAGCTCAAGCACG
GTCGTCTTGCCATGTGGGCGATGGCAGCAATCCTTATCCAACAGCTCCTC
GTCCCCGACAAGTCACCGCTCGAACTTGCGTTCGAGTGGTCGACGCAGTT
CAACTAAATATTCATCTTCGTAGGCATCTTTGATCTCCAGAGCACCAAGT
ACGACATGGAGCAGGGACGCGTACCCGGTGACATTGGATTCGACCCCCTC
AAGCTTTCCGCGGATGGAATCAATGAGAAGTGGGCGCTTGCAGAGCTCAA
GCACGGTCGTCTTGCCATGTGGGCGATGGCAGCAATCCTTATCCAACAGC
TCCTCGTCCCCGACAAGTCACCGCTCGAACTTGCGTTCGAGTGGTCGACG
CAGTTCAACTAA
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