prot_H-paniculata_contig5749.13307.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5749.13307.1
Unique Nameprot_H-paniculata_contig5749.13307.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length247
Homology
BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: D7G3D3_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D3_ECTSI)

HSP 1 Score: 352 bits (902), Expect = 2.090e-111
Identity = 161/212 (75.94%), Postives = 181/212 (85.38%), Query Frame = 0
Query:    1 MALPERLVGRDGRVLWDRNSNGLLPDPGTLVREIRSGNGVTDLSLLRQCVTLVLVQATPSSLGTWCSWLLCLADPGPTLRNLRESSGGSRVCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKA---EADPLSTLPQDFQAVARIVVRGVVLFLAGLAWSSLDTFDPSA 209
            M+LP+ LVGRDG+ +WDR SN  LPDPG LVREIRS +GVTDL+LLRQCV +VL  A PSSL TWCSWL CL +P  TLR+LRE SGGSRVCGYVFKRGDIAWNCRKCQVD+TCVQCD CFR SDHTGHPVYFHRTAPGGCCDCGDEEAWA++GCC+RH+   GD+      DPL+ LP DFQAVARIVVRGVVLFLAG+ WSSLDT+DP++
Sbjct:    1 MSLPKELVGRDGKTIWDRKSNA-LPDPGALVREIRSPDGVTDLTLLRQCVMVVLAHAHPSSLPTWCSWLCCLGEPETTLRSLREMSGGSRVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPVYFHRTAPGGCCDCGDEEAWAEEGCCSRHRPRRGDQGGGGAGDPLAALPTDFQAVARIVVRGVVLFLAGVCWSSLDTYDPAS 211          
BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A6H5KBJ7_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBJ7_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 1.890e-50
Identity = 87/158 (55.06%), Postives = 96/158 (60.76%), Query Frame = 0
Query:   52 LVLVQATPSSLGTWCSWLLCLADPGPTLRNLRESSGGSRVCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVRGVVLFLAGLAWSSLDTFDPSA 209
            +VL  A PSSL TWCSWL CL +P  TLR+LRE+SGGSRVCGYVFKRGDIAWNCRKCQVD+TCVQCD CFR SDHTGHP                                                  AVARIVVRGVVLFL G+ WSSLDT+DP++
Sbjct:    2 VVLAHARPSSLPTWCSWLCCLGEPETTLRSLRETSGGSRVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHP--------------------------------------------------AVARIVVRGVVLFLTGVCWSSLDTYDPAS 109          
BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A836CB31_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB31_9STRA)

HSP 1 Score: 165 bits (418), Expect = 6.050e-43
Identity = 93/243 (38.27%), Postives = 118/243 (48.56%), Query Frame = 0
Query:    1 MALPERLVGRDGRVLWDRNSNGLLPDPGTLVREIRSGNGVTDLSLLRQCVTLVLVQATPSSLGTWCSWLLCLADPGPTLRNLRESSGGSRVCGYVFKRGDIAWNCRKCQVDNTCVQ-------------------------------------CDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVRGVVLFLAGLAWSSLDTFD 206
            MA    L G  G VLW   +  +LPDP  +  E+ +G+ V + +LL+  V  VL      S+ +W +WL   A   P   +  + S   R+CGYVFKRGDIAWNC  CQ D T VQ                                     CD+CFR S H GH V+FHRT  GGCCDCGDEEAWA DGCC  H       A  DPL++LP      AR  VR ++ F   + W  + +F+
Sbjct:    1 MAQKAVLHGVTGTVLWQPEAPTVLPDPPIVAAEVYAGDAVNE-ALLQALVAAVLDHQPLDSITSWLNWL---ASGNPRCLDGLQGSTTRRICGYVFKRGDIAWNCLTCQCDPTAVQETTTREVAGALCICVALIHAIINPNHFPSFPAVQLQQCDSCFRQSSHVGHKVFFHRTNAGGCCDCGDEEAWATDGCCPTHSAAA---ATVDPLASLPPLLLTGARATVRAILDFATTVVWDCVHSFE 236          
BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: K8YNA8_NANGC (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNA8_NANGC)

HSP 1 Score: 150 bits (380), Expect = 5.710e-42
Identity = 75/182 (41.21%), Postives = 94/182 (51.65%), Query Frame = 0
Query:   44 SLLRQCVTLVLVQATPSSLGTWCSWLLCLADPGPTLRNLRESSGGSR-----------------VCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVRGVVLFLAGLAWSSLDTFDPS 208
            +LLR+C   V  +     L  W    LC+ + GP        SG  R                 VCGY FKRGD+ WNCR CQ D TCVQCD CFR SDH GH VYFH+ +PGGCCDCGD EAW   GCCT H   +G     DP+ +LP   +  AR+V+   V  +      ++  ++ S
Sbjct:    9 ALLRECARQVFRRGPVDKLADWGDHFLCV-EVGPRKDAEPTGSGSGREIDTGRLKSLHLTAQRGVCGYTFKRGDLCWNCRSCQTDPTCVQCDPCFRASDHAGHEVYFHQASPGGCCDCGDLEAWDRAGCCTAH---SGSDPFQDPVDSLPTSMRLPARVVLAEAVALVTDACLQAVQGYNSS 186          
BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A4D9D1X7_9STRA (E3 ubiquitin-protein ligase n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X7_9STRA)

HSP 1 Score: 162 bits (410), Expect = 7.190e-42
Identity = 84/223 (37.67%), Postives = 109/223 (48.88%), Query Frame = 0
Query:    6 RLVGRDGRVLWDRNSNGLL---PDPGTLVREIRSGNGVTDLSLLRQCVTLVLVQATPSSLGTWCSWLLCLADPGPTLRNLRESSGGSR-----------------VCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVRGVVLFLAGLAWSSLDTFDPS 208
            R+   DG V++     G++   P P  +V  I   +     +LLR+C   V  +     L  W    LC+ + GP        SG  R                 VCGY FKRGD+ WNCR CQ D TCVQCD CFR SDH GH VYFH+ +PGGCCDCGD EAW   GCCT H   +G     DP+ +LP   +  AR+V    V  +      ++  ++ S
Sbjct:   26 RITKTDGTVIYSNEDEGVIRSYPSPSEVVSAIAHADDPHTCALLRECARQVFRRGPVDKLADWGDHFLCV-EVGPRKDAELTGSGSGREIDTGRLKSLHLTAQRGVCGYTFKRGDLCWNCRSCQTDPTCVQCDPCFRASDHAGHEVYFHQASPGGCCDCGDLEAWDRAGCCTAH---SGSDPCQDPVDSLPASMRLPARVVFAEAVALVTDACLQAVQGYNSS 244          
BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A7R9YGT1_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGT1_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.490e-40
Identity = 77/170 (45.29%), Postives = 98/170 (57.65%), Query Frame = 0
Query:   24 LPDPGTLVREIRSGNGVTD----LSLLRQCVTLVLVQATPSSLGTWCSWLLCLADPGPTLR-NLRESSGGSRVCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVR 188
            LP P T V  +  G+        ++L+++    VL  A  S +  W    L  A  G   R    E +   R CGYVF+ GDI WNCR C+ D+TCVQCD CF+LSDHTGH V+FH+ +P GCCDCGDEEAWA +GCC RH++   ++   DPL  L   F   AR VV 
Sbjct:   21 LPPPATFVHTLALGSQSRPEEERIALVKRATRAVLRAADASEVSLWLKSFLAFAFDGDARRLESLEDANPKRYCGYVFREGDICWNCRTCEKDSTCVQCDACFQLSDHTGHDVFFHKASPNGCCDCGDEEAWAWEGCCPRHRRRENEELR-DPLEVLDPFFAKSARAVVE 189          
BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A7S1TVV5_9STRA (E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVV5_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.480e-40
Identity = 79/183 (43.17%), Postives = 100/183 (54.64%), Query Frame = 0
Query:   12 GRVLWDRNSNGLLPDPGTLVREIRSGNGVTD-----LSLLRQCVTLVLVQATPSSLGTWCSWLLCLADPGPTLR-NLRESSGGSRVCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVR 188
            G  +W R     LP P   V  ++      D     L +LR+    VL    P+    W + LLC A  G   R +  E++   R CGYVF+ GDI WNCR C+ D TCVQCD CF+ SDH GH V+FH+ +P GCCDCGDEEAWA  GCC  H++   +    DP+S L   F A AR V+ 
Sbjct:   13 GPTVW-RGEASTLPSPEVFVAHLQRAARDLDSDAARLDMLRRASRAVLRAVAPTDAAAWLAGLLCYAYGGDASRLDGLENANPKRYCGYVFQEGDICWNCRTCEADATCVQCDACFQASDHEGHEVFFHKASPNGCCDCGDEEAWALAGCCPLHRRNENETLR-DPVSALDAAFAAAARAVLE 193          
BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A7S3ZP19_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZP19_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.870e-40
Identity = 75/171 (43.86%), Postives = 97/171 (56.73%), Query Frame = 0
Query:   42 DLSLLRQCVTLVLVQATPSSLGTWCSWLLCLA---DPGP--TLRNLRESSGGSRVCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVRGVVLFLAGLAWSSLDTFDP 207
            D   + +        A P  L +W + LLC     + GP   L  L E++   R CG+VF  GDIAWNCR CQ DNTCV CD CFR S+H GH V+FHR APGGCCDCGD EAW  +GCC +H+  +    E DPL++LP   +    +VVR    ++ G A  +    +P
Sbjct:   58 DTEAIARAARRCFASAPPKQLRSWATHLLCCRVAQNDGPFGLLAKLAETN--QRACGHVFAAGDIAWNCRTCQKDNTCVLCDACFRSSNHQGHEVFFHRAAPGGCCDCGDPEAWVAEGCCAKHRASS--VVEEDPLASLPPGLRQAGEVVVREAARYVVGAAVRAAGAHEP 224          
BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A7S4EF35_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EF35_9STRA)

HSP 1 Score: 140 bits (353), Expect = 3.280e-38
Identity = 62/103 (60.19%), Postives = 68/103 (66.02%), Query Frame = 0
Query:   90 RVCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQ--PTGDKAEADPLSTLPQDFQAVARIVVRGV 190
            R CGYVFKRGDIAWNCR CQ D+TCV CDTCFR SDH GH VYFHRT PGGCCDCGD EAW  +GCC  H+   PT    E         D +   R+  RG+
Sbjct:   27 RPCGYVFKRGDIAWNCRTCQTDSTCVICDTCFRSSDHEGHEVYFHRTTPGGCCDCGDAEAWKPEGCCPAHRPLTPTSSTGEDSEGVDGEADPEEAVRMAQRGL 129          
BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A7S3XNE3_HETAK (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNE3_HETAK)

HSP 1 Score: 137 bits (346), Expect = 2.160e-37
Identity = 69/144 (47.92%), Postives = 85/144 (59.03%), Query Frame = 0
Query:   12 GRVLWDRNSNGLLPDPGTLVREIRSGNGVTDLSLLRQCVTLVLVQATPSSLGTWCSWLLCLA---DPGPTLRNLR--ESSGGSRVCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAW 150
            GR+L++   +  LP+P  L   +    G  D  LL      VL    P  + ++ SWLL      +  P    LR   ++  +RVCGYVF+RGDIAWNCR CQ D TCVQCD C+R +DH GH V FHRT PGGCCDCGD EAW
Sbjct:   12 GRLLFEGLPDS-LPEPRGLAALVAGVPG-PDTQLLLSAARAVLNHCDPPQIDSYLSWLLVARWGDEEAPDPARLRGLANANAARVCGYVFQRGDIAWNCRDCQKDPTCVQCDACYRAADHRGHAVTFHRTGPGGCCDCGDAEAW 153          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3D3_ECTSI2.090e-11175.94E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A6H5KBJ7_9PHAE1.890e-5055.06E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
A0A836CB31_9STRA6.050e-4338.27E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
K8YNA8_NANGC5.710e-4241.21E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nan... [more]
A0A4D9D1X7_9STRA7.190e-4237.67E3 ubiquitin-protein ligase n=6 Tax=Monodopsidacea... [more]
A0A7R9YGT1_9STRA1.490e-4045.29E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pin... [more]
A0A7S1TVV5_9STRA3.480e-4043.17E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Pha... [more]
A0A7S3ZP19_9STRA3.870e-4043.86E3 ubiquitin-protein ligase n=2 Tax=Pelagomonas ca... [more]
A0A7S4EF35_9STRA3.280e-3860.19E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pse... [more]
A0A7S3XNE3_HETAK2.160e-3747.92E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Het... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003126Zinc finger, UBR-typeSMARTSM00396push_1coord: 90..160
e-value: 1.2E-17
score: 74.7
IPR003126Zinc finger, UBR-typePFAMPF02207zf-UBRcoord: 92..159
e-value: 2.0E-16
score: 59.9
IPR003126Zinc finger, UBR-typePROSITEPS51157ZF_UBRcoord: 90..161
score: 10.005
NoneNo IPR availableGENE3D2.10.110.30coord: 92..161
e-value: 5.6E-21
score: 76.3
NoneNo IPR availablePANTHERPTHR21497:SF24E3 UBIQUITIN-PROTEIN LIGASE UBR1coord: 55..184
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 55..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5749contigH-paniculata_contig5749:679..8678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5749.13307.1mRNA_H-paniculata_contig5749.13307.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5749 290..8678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5749.13307.1 ID=prot_H-paniculata_contig5749.13307.1|Name=mRNA_H-paniculata_contig5749.13307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=247bp
MALPERLVGRDGRVLWDRNSNGLLPDPGTLVREIRSGNGVTDLSLLRQCV
TLVLVQATPSSLGTWCSWLLCLADPGPTLRNLRESSGGSRVCGYVFKRGD
IAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAW
ADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVRGVVLFLAGLAWS
SLDTFDPSANFVSHDRGSAGLGGDGGGGSGGGSSGRYGGGNASTRGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003126Znf_UBR
IPR039164UBR1-like