mRNA_H-paniculata_contig5749.13307.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5749.13307.1
Unique NamemRNA_H-paniculata_contig5749.13307.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: D7G3D3_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D3_ECTSI)

HSP 1 Score: 351 bits (901), Expect = 3.640e-109
Identity = 161/212 (75.94%), Postives = 181/212 (85.38%), Query Frame = 3 
Query:  390 MALPERLVGRDGRVLWDRNSNGLLPDPGTLVREIRSGNGVTDLSLLRQCVTLVLVQATPSSLGTWCSWLLCLADPGPTLRNLRESSGGSRVCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKA---EADPLSTLPQDFQAVARIVVRGVVLFLAGLAWSSLDTFDPSA 1016
            M+LP+ LVGRDG+ +WDR SN  LPDPG LVREIRS +GVTDL+LLRQCV +VL  A PSSL TWCSWL CL +P  TLR+LRE SGGSRVCGYVFKRGDIAWNCRKCQVD+TCVQCD CFR SDHTGHPVYFHRTAPGGCCDCGDEEAWA++GCC+RH+   GD+      DPL+ LP DFQAVARIVVRGVVLFLAG+ WSSLDT+DP++
Sbjct:    1 MSLPKELVGRDGKTIWDRKSNA-LPDPGALVREIRSPDGVTDLTLLRQCVMVVLAHAHPSSLPTWCSWLCCLGEPETTLRSLREMSGGSRVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPVYFHRTAPGGCCDCGDEEAWAEEGCCSRHRPRRGDQGGGGAGDPLAALPTDFQAVARIVVRGVVLFLAGVCWSSLDTYDPAS 211
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BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A6H5KBJ7_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBJ7_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 8.730e-49
Identity = 87/158 (55.06%), Postives = 96/158 (60.76%), Query Frame = 3 
Query:  543 LVLVQATPSSLGTWCSWLLCLADPGPTLRNLRESSGGSRVCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVRGVVLFLAGLAWSSLDTFDPSA 1016
            +VL  A PSSL TWCSWL CL +P  TLR+LRE+SGGSRVCGYVFKRGDIAWNCRKCQVD+TCVQCD CFR SDHTGHP                                                  AVARIVVRGVVLFL G+ WSSLDT+DP++
Sbjct:    2 VVLAHARPSSLPTWCSWLCCLGEPETTLRSLRETSGGSRVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHP--------------------------------------------------AVARIVVRGVVLFLTGVCWSSLDTYDPAS 109
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BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A836CB31_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB31_9STRA)

HSP 1 Score: 165 bits (417), Expect = 4.060e-41
Identity = 93/243 (38.27%), Postives = 118/243 (48.56%), Query Frame = 3 
Query:  390 MALPERLVGRDGRVLWDRNSNGLLPDPGTLVREIRSGNGVTDLSLLRQCVTLVLVQATPSSLGTWCSWLLCLADPGPTLRNLRESSGGSRVCGYVFKRGDIAWNCRKCQVDNTCVQ-------------------------------------CDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVRGVVLFLAGLAWSSLDTFD 1007
            MA    L G  G VLW   +  +LPDP  +  E+ +G+ V + +LL+  V  VL      S+ +W +WL   A   P   +  + S   R+CGYVFKRGDIAWNC  CQ D T VQ                                     CD+CFR S H GH V+FHRT  GGCCDCGDEEAWA DGCC  H       A  DPL++LP      AR  VR ++ F   + W  + +F+
Sbjct:    1 MAQKAVLHGVTGTVLWQPEAPTVLPDPPIVAAEVYAGDAVNE-ALLQALVAAVLDHQPLDSITSWLNWL---ASGNPRCLDGLQGSTTRRICGYVFKRGDIAWNCLTCQCDPTAVQETTTREVAGALCICVALIHAIINPNHFPSFPAVQLQQCDSCFRQSSHVGHKVFFHRTNAGGCCDCGDEEAWATDGCCPTHSAAA---ATVDPLASLPPLLLTGARATVRAILDFATTVVWDCVHSFE 236
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BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: K8YNA8_NANGC (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNA8_NANGC)

HSP 1 Score: 150 bits (380), Expect = 1.980e-40
Identity = 75/182 (41.21%), Postives = 94/182 (51.65%), Query Frame = 3 
Query:  519 SLLRQCVTLVLVQATPSSLGTWCSWLLCLADPGPTLRNLRESSGGSR-----------------VCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVRGVVLFLAGLAWSSLDTFDPS 1013
            +LLR+C   V  +     L  W    LC+ + GP        SG  R                 VCGY FKRGD+ WNCR CQ D TCVQCD CFR SDH GH VYFH+ +PGGCCDCGD EAW   GCCT H   +G     DP+ +LP   +  AR+V+   V  +      ++  ++ S
Sbjct:    9 ALLRECARQVFRRGPVDKLADWGDHFLCV-EVGPRKDAEPTGSGSGREIDTGRLKSLHLTAQRGVCGYTFKRGDLCWNCRSCQTDPTCVQCDPCFRASDHAGHEVYFHQASPGGCCDCGDLEAWDRAGCCTAH---SGSDPFQDPVDSLPTSMRLPARVVLAEAVALVTDACLQAVQGYNSS 186
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BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A4D9D1X7_9STRA (E3 ubiquitin-protein ligase n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X7_9STRA)

HSP 1 Score: 162 bits (409), Expect = 4.700e-40
Identity = 84/223 (37.67%), Postives = 109/223 (48.88%), Query Frame = 3 
Query:  405 RLVGRDGRVLWDRNSNGLL---PDPGTLVREIRSGNGVTDLSLLRQCVTLVLVQATPSSLGTWCSWLLCLADPGPTLRNLRESSGGSR-----------------VCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVRGVVLFLAGLAWSSLDTFDPS 1013
            R+   DG V++     G++   P P  +V  I   +     +LLR+C   V  +     L  W    LC+ + GP        SG  R                 VCGY FKRGD+ WNCR CQ D TCVQCD CFR SDH GH VYFH+ +PGGCCDCGD EAW   GCCT H   +G     DP+ +LP   +  AR+V    V  +      ++  ++ S
Sbjct:   26 RITKTDGTVIYSNEDEGVIRSYPSPSEVVSAIAHADDPHTCALLRECARQVFRRGPVDKLADWGDHFLCV-EVGPRKDAELTGSGSGREIDTGRLKSLHLTAQRGVCGYTFKRGDLCWNCRSCQTDPTCVQCDPCFRASDHAGHEVYFHQASPGGCCDCGDLEAWDRAGCCTAH---SGSDPCQDPVDSLPASMRLPARVVFAEAVALVTDACLQAVQGYNSS 244
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BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A7R9YGT1_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGT1_9STRA)

HSP 1 Score: 158 bits (400), Expect = 6.620e-39
Identity = 77/170 (45.29%), Postives = 98/170 (57.65%), Query Frame = 3 
Query:  459 LPDPGTLVREIRSGNGVTD----LSLLRQCVTLVLVQATPSSLGTWCSWLLCLADPGPTLR-NLRESSGGSRVCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVR 953
            LP P T V  +  G+        ++L+++    VL  A  S +  W    L  A  G   R    E +   R CGYVF+ GDI WNCR C+ D+TCVQCD CF+LSDHTGH V+FH+ +P GCCDCGDEEAWA +GCC RH++   ++   DPL  L   F   AR VV 
Sbjct:   21 LPPPATFVHTLALGSQSRPEEERIALVKRATRAVLRAADASEVSLWLKSFLAFAFDGDARRLESLEDANPKRYCGYVFREGDICWNCRTCEKDSTCVQCDACFQLSDHTGHDVFFHKASPNGCCDCGDEEAWAWEGCCPRHRRRENEELR-DPLEVLDPFFAKSARAVVE 189
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BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A7S1TVV5_9STRA (E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVV5_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.440e-38
Identity = 79/183 (43.17%), Postives = 100/183 (54.64%), Query Frame = 3 
Query:  423 GRVLWDRNSNGLLPDPGTLVREIRSGNGVTD-----LSLLRQCVTLVLVQATPSSLGTWCSWLLCLADPGPTLR-NLRESSGGSRVCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVR 953
            G  +W R     LP P   V  ++      D     L +LR+    VL    P+    W + LLC A  G   R +  E++   R CGYVF+ GDI WNCR C+ D TCVQCD CF+ SDH GH V+FH+ +P GCCDCGDEEAWA  GCC  H++   +    DP+S L   F A AR V+ 
Sbjct:   13 GPTVW-RGEASTLPSPEVFVAHLQRAARDLDSDAARLDMLRRASRAVLRAVAPTDAAAWLAGLLCYAYGGDASRLDGLENANPKRYCGYVFQEGDICWNCRTCEADATCVQCDACFQASDHEGHEVFFHKASPNGCCDCGDEEAWALAGCCPLHRRNENETLR-DPVSALDAAFAAAARAVLE 193
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BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A7S3ZP19_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZP19_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.740e-38
Identity = 75/171 (43.86%), Postives = 97/171 (56.73%), Query Frame = 3 
Query:  513 DLSLLRQCVTLVLVQATPSSLGTWCSWLLCLA---DPGP--TLRNLRESSGGSRVCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVRGVVLFLAGLAWSSLDTFDP 1010
            D   + +        A P  L +W + LLC     + GP   L  L E++   R CG+VF  GDIAWNCR CQ DNTCV CD CFR S+H GH V+FHR APGGCCDCGD EAW  +GCC +H+  +    E DPL++LP   +    +VVR    ++ G A  +    +P
Sbjct:   58 DTEAIARAARRCFASAPPKQLRSWATHLLCCRVAQNDGPFGLLAKLAETN--QRACGHVFAAGDIAWNCRTCQKDNTCVLCDACFRSSNHQGHEVFFHRAAPGGCCDCGDPEAWVAEGCCAKHRASS--VVEEDPLASLPPGLRQAGEVVVREAARYVVGAAVRAAGAHEP 224
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BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A7S4EF35_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EF35_9STRA)

HSP 1 Score: 140 bits (353), Expect = 9.620e-37
Identity = 62/103 (60.19%), Postives = 68/103 (66.02%), Query Frame = 3 
Query:  657 RVCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAWADDGCCTRHKQ--PTGDKAEADPLSTLPQDFQAVARIVVRGV 959
            R CGYVFKRGDIAWNCR CQ D+TCV CDTCFR SDH GH VYFHRT PGGCCDCGD EAW  +GCC  H+   PT    E         D +   R+  RG+
Sbjct:   27 RPCGYVFKRGDIAWNCRTCQTDSTCVICDTCFRSSDHEGHEVYFHRTTPGGCCDCGDAEAWKPEGCCPAHRPLTPTSSTGEDSEGVDGEADPEEAVRMAQRGL 129
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BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Match: A0A7S3XNE3_HETAK (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNE3_HETAK)

HSP 1 Score: 137 bits (346), Expect = 6.040e-36
Identity = 69/144 (47.92%), Postives = 85/144 (59.03%), Query Frame = 3 
Query:  423 GRVLWDRNSNGLLPDPGTLVREIRSGNGVTDLSLLRQCVTLVLVQATPSSLGTWCSWLLCLA---DPGPTLRNLR--ESSGGSRVCGYVFKRGDIAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAW 839
            GR+L++   +  LP+P  L   +    G  D  LL      VL    P  + ++ SWLL      +  P    LR   ++  +RVCGYVF+RGDIAWNCR CQ D TCVQCD C+R +DH GH V FHRT PGGCCDCGD EAW
Sbjct:   12 GRLLFEGLPDS-LPEPRGLAALVAGVPG-PDTQLLLSAARAVLNHCDPPQIDSYLSWLLVARWGDEEAPDPARLRGLANANAARVCGYVFQRGDIAWNCRDCQKDPTCVQCDACYRAADHRGHAVTFHRTGPGGCCDCGDAEAW 153
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5749.13307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3D3_ECTSI3.640e-10975.94E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A6H5KBJ7_9PHAE8.730e-4955.06E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
A0A836CB31_9STRA4.060e-4138.27E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
K8YNA8_NANGC1.980e-4041.21E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nan... [more]
A0A4D9D1X7_9STRA4.700e-4037.67E3 ubiquitin-protein ligase n=6 Tax=Monodopsidacea... [more]
A0A7R9YGT1_9STRA6.620e-3945.29E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pin... [more]
A0A7S1TVV5_9STRA1.440e-3843.17E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Pha... [more]
A0A7S3ZP19_9STRA1.740e-3843.86E3 ubiquitin-protein ligase n=2 Tax=Pelagomonas ca... [more]
A0A7S4EF35_9STRA9.620e-3760.19E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pse... [more]
A0A7S3XNE3_HETAK6.040e-3647.92E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Het... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5749contigH-paniculata_contig5749:290..8678 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score351.3
Seed ortholog evalue3.7e-94
Seed eggNOG ortholog2880.D7G3D3
KEGG koko:K10626
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquitin-dependent protein catabolic process via the N-end rule pathway
EggNOG OGsKOG1140@1,KOG1140@2759
EC2.3.2.27
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04121
Exons5
Model size1130
Cds size741
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5749.13307.1prot_H-paniculata_contig5749.13307.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5749 679..8678 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930619.5616682-UTR-H-paniculata_contig5749:289..6781622930619.5616682-UTR-H-paniculata_contig5749:289..678Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5749 290..678 +
1691481375.3863509-UTR-H-paniculata_contig5749:289..6781691481375.3863509-UTR-H-paniculata_contig5749:289..678Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5749 290..678 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930619.5731077-CDS-H-paniculata_contig5749:678..8021622930619.5731077-CDS-H-paniculata_contig5749:678..802Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5749 679..802 +
1691481375.3990338-CDS-H-paniculata_contig5749:678..8021691481375.3990338-CDS-H-paniculata_contig5749:678..802Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5749 679..802 +
1622930619.5878177-CDS-H-paniculata_contig5749:4604..47491622930619.5878177-CDS-H-paniculata_contig5749:4604..4749Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5749 4605..4749 +
1691481375.4169397-CDS-H-paniculata_contig5749:4604..47491691481375.4169397-CDS-H-paniculata_contig5749:4604..4749Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5749 4605..4749 +
1622930619.603803-CDS-H-paniculata_contig5749:6793..69141622930619.603803-CDS-H-paniculata_contig5749:6793..6914Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5749 6794..6914 +
1691481375.4275916-CDS-H-paniculata_contig5749:6793..69141691481375.4275916-CDS-H-paniculata_contig5749:6793..6914Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5749 6794..6914 +
1622930619.6328459-CDS-H-paniculata_contig5749:7810..79601622930619.6328459-CDS-H-paniculata_contig5749:7810..7960Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5749 7811..7960 +
1691481375.4371414-CDS-H-paniculata_contig5749:7810..79601691481375.4371414-CDS-H-paniculata_contig5749:7810..7960Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5749 7811..7960 +
1622930619.666325-CDS-H-paniculata_contig5749:8477..86781622930619.666325-CDS-H-paniculata_contig5749:8477..8678Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5749 8478..8678 +
1691481375.4470785-CDS-H-paniculata_contig5749:8477..86781691481375.4470785-CDS-H-paniculata_contig5749:8477..8678Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5749 8478..8678 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5749.13307.1

>prot_H-paniculata_contig5749.13307.1 ID=prot_H-paniculata_contig5749.13307.1|Name=mRNA_H-paniculata_contig5749.13307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=247bp
MALPERLVGRDGRVLWDRNSNGLLPDPGTLVREIRSGNGVTDLSLLRQCV
TLVLVQATPSSLGTWCSWLLCLADPGPTLRNLRESSGGSRVCGYVFKRGD
IAWNCRKCQVDNTCVQCDTCFRLSDHTGHPVYFHRTAPGGCCDCGDEEAW
ADDGCCTRHKQPTGDKAEADPLSTLPQDFQAVARIVVRGVVLFLAGLAWS
SLDTFDPSANFVSHDRGSAGLGGDGGGGSGGGSSGRYGGGNASTRGV
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mRNA from alignment at H-paniculata_contig5749:290..8678+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5749.13307.1 ID=mRNA_H-paniculata_contig5749.13307.1|Name=mRNA_H-paniculata_contig5749.13307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8389bp|location=Sequence derived from alignment at H-paniculata_contig5749:290..8678+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAAATTAGTGCGGGAAAGCGGTGCAATGGTGAAAAATGCTCGGACCCGGT
GAAAAAAACAGCGCAGATCAGAAAGGCAGTACCGTGCAGTTCAGTACTGT
AGGTGATGCAGTTCGTGCTCGCATGATCTAACAATCTGCGGTAGTCAAGA
AAAGTACCAGCAACTGCTGAGGCATCCTCTAATTCTGTAAACCCAGGCAC
TTTTTTTGTGGTAGCCGCCGACAACGGGCGCGGGATCAATCTGTTCTACA
CTCTCGAGATATCTCCAAGCTTCTGAGTTTCTGAATTTCTGAGTGACCAG
ACGTGCGATAACGGAGAGCATTCATCACATCAGGTCGGGGTGGGGGTACA
CCAGTACGTGCAGTAGCGCTTGGAGTGGCGCTGTTGCAAATGGCTTTGCC
GGAAAGGCTAGTCGGGCGAGATGGACGGGTACTATGGGATCGGAACAGCA
ATGGCTTGCTGCCCGACCCCGGCACGCTCGTGCGGGAGATTCGCTCGGGG
AACGGAGTCACAGGCAAGAGGCTTTCTGTATTGGCACACTGAGTCGATGT
TGCATACCGCCCTTTGTTGGACATGGTATGCATATGCATTAATAAACAGT
CCCTTGAGAAAGTGGCTTATGACCTACTATTCACCGCCGTGTGCTAACCG
CGTAATGCGTACTTTCTGCACTGGTTGCATGCGTGGCCATTCCTCGTGTA
GCAATAATTGTCCGTGCAGGTGACGTCTCTCTCTGTTCACGGCCTTGTGT
GCAGCTGCAGCGATACGTATCAGCGTTCATCCATCTGCCACGGGTATCGC
TGCGGCGAGCCCTGCTCCTTTAGTATCAGTTTACGAAGAGTGTAACTGAT
GTTCATAAGTAGTGTAACTGCCTCTTCATATCTTTATTTTTTCATTGGTG
TTACATGAGAGACCCCGTGTTTCCTGTTGTGCAGTATCAGTTCGACGGCA
GGGGGGGGTTATACGAGAAGTTTTAAAAAGCTTCTCCGCGGCTCACAGGC
CTGTGGTACCGCCGAATTTCTAGAAACGCTGAGGTGGAGGCCCGATCTCT
ACCGATCGCGACACATGGCTAATGCAATGTTGAGAGTTGTGCTTGGGACA
AGCAACAGGTTCTCGTGACCGCAGAGGTTGCCTCGCTGGGTAGACATGTA
AAGAAGTTGTCCAATATCCTCATGTGCTCCCGAGTCTCCGGCAACTTGCT
CTTGGTACGGTGGGCAAGCGGGAAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAAGTAGGCCAGCAAGCCAGCCACAGCAGGCCACAGGG
CAGAATTCCCCAGTAAATCAGGAGAAGCTAACACTTTTCTCACACACACC
CGGTCCCGCAGACTGTGTCTTTGCTCAGTTTGTTTTTATCGCAGTTGAAG
TAGGACTGTCTATATCGTACAGCTTTACTGGGCTGTACTGTACTCCATTG
TGTTTCCTTTTTTGTATCATTATTTTTTGGTCTTCAGTGACAGTTTGGGT
ACGTTCTGAGGCAACTCACTGGCTCTGGTTTACTACGTTCTCTGCGAAAG
CAGCATGATTGACCATTGATTATTCTTAACGCGTCGCTTTTGTCGGGATC
TTCACTGCAAAAGCAATCGCCCGTACCGTGCTGAAGTGTTTCAATATTCG
GACTGAGCGCTTTTCACCTAACTTTTCCGACCTGTCGGAAAACCACACGC
GGCAATGTCAACGAATTTGAGGAAGCTGCGAAGCCGACGACTGGCAAGTA
ATCGTTATACAAGGCAAGATCTGTTTTATGTAGTCGTGTCCTCGAAAATA
TTCGGAAACATGTCATTCGTTCTAGCCGACGAACGGCTGATGTGTATCCC
GTTCAAGGTGCAAAATAAAAGCGTAAATTATTGAAATCCGAAGCCATTTT
CCAATCTTTTACTCACGCTCAACAGTAGCGGATATCTCGCACTACGCTCA
TGTAGTAGCCACCACCACCTACTGTAAGCCCTAAATACCATACCTTTCGG
GAGGAGAGATAATATGAGTCATTAAACGTGGTTTGTGTTGAGGTCGACCA
ACTAATGCCCCTGTTAAATGGTCTCCGTTCGGACCACCGCAATCTGTTAG
CTGTTCTTCTGAGCGTTACGAAATGCCTCGATTTGCTATGGTTCATGGCC
TACAGCTGATGTTATCATGATATCAGTAACGCGTTCCGACCATTGTAATA
CCAAGTGAACTTAAAAAATCAGTATCAAGGCGAGTCCCCCGAAAATAACG
AATCTTTACCTATATATGCATATACTAGTGGAAAGGTTACATCTCCGCCA
GTGACGGCGATTTTGTGGACGATGTTGCGGCACCTCTAAATAGTCGACGT
AAACGGACTCGCTACGCTCGCCGCGGTTGCTTGCGCTTCTCGCATGTAGG
CGCTATTAACATTCAAGTTTCGCGCTATATACACGGACGCGCTGCGCTCA
CGGTTACTCGATTGCGCTCACACGCATTTAGGCACAGTGTCAATCAGCAA
GTTTGCAATTTTCGAGAGGTGTTTGGTGACTGCAGAATGCGCGCGGGCAG
CGTTCAACATTTATACACTGACCCACCGGTACTGCTGTCTCTTAGGAATG
CCGATCATGTGAGGTGCAGAAGCCGAAAAATTACAAGCCCGGAGAAAGTA
CTGACATGAAACTATGCAACTGTTGTACTGAATGGGGGGGTATTGTATAC
ACCAACAGTGTAAAGCACTGCAATTATTCAACTTGACGCTCTTCCAACAA
CTTCTCGTCACACCCACTTCAGCGCCAGGCTGCCTCTCCCATACTATACT
CTGGACAGTATCCCCGCACGTACAAGTGCGTTGTCCCTGCTGTCATGTGT
ATACTGCGTGTGGAGCACAGCACCAGGACCGACTGCAAGACAAAAGTGAA
CAATGTCTACTGGACTGTACCATTTGTACATGGTCTCTTCGACACGCACA
CACACTCTCCCATTATCATTTTTTCTCTCCTGGTACGAAGACGTATTCCC
ATGGCGATGTGTCTCTGGTGCGTCTCTGTTTCCTTGTCCTCCAGTCTAGC
TGGAGGTACCTGTCGTTGTTCTCAAGTGCATTGCAGTGTACTGAGCTGTC
GGTTTGTCTGTCCGTGATGTATTGTGAACTGGCCTTTATGACCATGTTAG
AGCTGACTGTTAAGGAAACCGTGAGTATTTTTTTTTTCTAAACTTGATTC
AGCTGAAGCTTCTTTTTTTTTTCGGTATTGAAGATGGGAAATCGTATTAT
TGATGCCCGATTTGTGAAGTTACTTAGATGGAGACTCGAGAACGAGTTCC
GAAACGACCATAAGGCCAGCCTAATACAGAGGACGTGTCATACTGTAACT
TTCATCAGAATTATGGTGGTTTCGACTGTAGACCATGATCCACAATACAT
GAAGTCTTCTCCCAAGAAACTCAAAAGCACATGAACCCGTAAGCAGCCGG
TCTCGATAGAATAAATCTCTGCCTAATTAACTGCCTCTGAAGAAGCGGCA
GGAAACAACTATGGGTATTGAATGTCATAATGGGGGGGTTTACAAAAGAC
GGGGCTATCACAGACAGAAACACCTTCGTACACTACATATATAGCATACA
CAGCAGCACCCTCTTGACACGTATTTTGTCAAACAAGTGTGGAGCCATGC
CTATCCCCCGTGCATACCTGTTTTGTCCTCGATCCATTCTAAATGCTGCG
CTCACGTTAGCTCGCCACACTAGTAAGCAGCAGACACCATGTCAGCACAA
AGATTTGTAATTCAGAAGCTACAGTAATCAAGTGCAGACTTCGAAAGTTG
TTCCGAAACGATGATAACGAGGAAGACCTTACTTCCTTAACTACTAGAAC
AGACACATTTTTTTTTTTTTTCAAAATAGCCTGTTTTTAGTCGGTTCCTA
TTAAGTCGAATCTCCCTCAAGTCCGACAGAACAGAACGTAACATAATAAT
CCAAGATACCGGGGCTAGTGTACCGTTGTGGAACACATTCTATAGCATTC
TGTGCTTTTGTTCAGTCGATTTGCTCAGGACGACGACGATTTCTCGCTGC
TCTGTTTGGTCTACCAGGAAGGCCGTACTGTGTTCGCTACGAAGTTCTAC
AGCGAGGAGGACCTGTTTTGTGCCATGTGTTCAAAATGCCTTAAGTCGTA
ACTATAGAATATGATTTATAGGACGCGTGCGAGTGATACAAATGATACTC
CCTTGTGAAGATTTCTGTAGATTATGTCGGGCGTGGTCGAGAGAGAGGTG
CGTGAAGAATTTGTTTCTACCCCCGTCCCTACGCCCGTCCCTACCCCCGC
CCCTTCTACAACCAGATCTCTCGCTCTTGCGACAGTGCGTGACGCTAGTG
CTGGTGCAGGCGACCCCGTCATCCCTTGGCACGTGGTGCAGCTGGCTGCT
CTGTCTCGCTGATCCTGGGCCAACCCTGCGGAATTTGCGAGAGAGCAGCG
GAGGAAGCAGGTGTGTATTTTTTCCCCTTTGTCTGTGTTTCGATGTGGGG
CAATGGTGGTCGTTCAAACGTGGTGCTGGCCTTGGGTGCCATCCACCAAT
GGTTGGTAATACTGCGCGGTAGACCTGTTGGTCGCAAGGCCGAGATTGTA
ATGCCTTAGTTGGACAGCGTCTAATCGAAGAGATGAAGGATGGGATCGGG
AGGAAAGGAGAAGTGACAAAGCTTTGTGATTGGTTGAAGGGTTCTGTGAT
GACCAACGGAATGATAGACCGCACAAGAGATCGGTCACGGAGCTTCTTTC
CTTCTCTTGCCTCGCCAATTTCAATACTGGTGTCCTTGATGAGACATCGT
CTTATTTTGGCTCGCCTTGCAATTTCGCGTTTCAAGAGGGTAGCTGTCCG
AATAGGCAATATTTATGACATTTTTTCTTCTGTTTACTCCGAGGACAAAT
CAATTTGCATCTGGTATACACGAGTATACTTCATCCATGAGGCAAAGTAT
CTGGCTGTAACTAATATCATGGCATGCTTTGTACGTTTTGCGATGTCTAT
CTCACATGTGCAATAGTGAATTTTATCGCAAAAAAACAGATATGACAAAA
TATATATATATTTTTTCTGTCAAAATGAAGCGGAAAATCGATGAGACGGT
AGCTCGAAAACACTATTTGTATGAAAATGTTTTTTTCACTGGGAAACTGA
GCGAAAACAACAAAGCATTCCGTGTGATGGGTCTGTTATAATATTCATGG
CGAAGGGAGCGGCGGGGGGGCGAGGGAGGCGGAGTCAAGACGTGTCCTAA
CCAAACAGCACATCGTCATGTGGTCATGGTGTCTTGTCCATCCTGACAAC
AATTGCTCAAGTCTCTCTCATGTCCATCGCATCCTTACTCATGATCAATG
CCATGATCACAACAAAGGAAACGCTAGCCGCTTTAAAAATGACCCTCTCC
CTATTACACGTCCCTCTACTGTCGACGCCTTTTTACCCACGCTAGCTGGT
ATTGCCCACCATCCATCACGTCGGCGTTACTCAGCCCTTTCCATTCCTTT
GTTGTTGCCCTGCAGTTGCTGTAGTATTCTGTACTACATGATAAATGGCC
AGAGCGAATAGATATTTCGCGACCTGCTCACCCGAGACGCTGGTCATCCT
TGGCTCCCTTCAAAGACCCTCCCCGCCCCTATAATCCATTTAGTTCGGCT
GATAAGGGTACACGACTGAAATTTTGAGATCAGCACCATAACCTCAACAT
GGGTACGATGAGGTTATTATATGAGTGTTACAGCTTAGTTCTGCTGAATG
TGGCAGATGGATTGACTTGGGAGTATGTATCCTGGTGGGTGAAACGTAGG
CGTTGTTTAATGGGTGTCATTCAGTCGTGTGAAAATTATTTCGTTGTAAC
CTACAGTACGTTCGCAAGTGATACATGAATACTTTTTTCTCAAGACTGTC
AAGGCCAGTCCTGTCTTGTCGAAGAGGTGCGAGAGCCCCCTCCCCCCCCT
CCCTCCTCTCTTTCCTTTTTGATTGAGAAGCCTTGTCATCATAGTATTCC
CAGATGAAGGCGATAATACTACGGTAATTTTTAGGCGATATGATTGGAAA
TGGTCTGAAGAGATGAGGGGTAATGTAGACAGGTTACCATGGAACGTGGA
GATACCGATATCGCCCAAGTGCAAACACTTTGGAAATTGGACTATTTTGA
CAAGTAGAGCATTGTAGCTACTGAGAATGAAAAATAATGCGGACATCTGT
CTGTCGATTGGTTGACCGGGTTCGTTCGACCGTGCATTGCCTCGGTCTTC
GAGATCGTCAATCGCGTTCGGAAAAATATTCCCACTTCGATAGTACCTGT
TTCTACCCGTGTTTCGTAGAGTAGGGAATGGGGCTGAGTATCATCGGAGG
TTGCTGTTTTGGGATGGTGCCTTCATCGTCCTCTTAAGGATGATGCGTGC
GTCTGTGTCTCGCACAAACGCACTGCTTCCAACACCATGAATACGTCGAT
GTGCTGACGGGATGGTGGCGATGGTGGTTGTTCTGCCGTCGCTTTGACTA
TCAGGGTTTGCGGGTACGTGTTCAAGAGGGGAGATATAGCATGGAACTGC
CGGAAATGTCAAGTTGACAACACGTGCGTGCAGTGCGACACCTGCTTCAG
GCTTTCGGATCACACTGGACATCCGGTGAGAGGGCTAAATCATCGTTGCT
CGCGGTTTGCTACCAGTAATTCCTGGAGGTGTCGCATCGCTCCGCGGTAC
GAACGGTTTTCCAACCGCTGTTGGTTTATCTCGAGAACTACTGCACTGCC
AACTGTTTATACTGAGAAGGGAATGCGAGAGTGTGCTGTTGGAAAGATTT
TGCCAATATGTGATATATATCGAATAGCCGGTTTTTCCGACTGCGTAATA
CTGTATCCGTTCTCGAGTTAGTTGCGCTTGAACAGCGTTCGCACCCCGAT
ACTTGGGGCGATATGTCTCTGCGGGCTTCACGGTAGTTCCATTACTTAAT
ATGGAAAGGTGATCATCCTTGGGGAACATATATATATATTTGCAATCCAG
TAATTCCTGACAACTCAATCTTCATGCAAGCGTCGCGAGCTACCTACGAG
CGCAGCCTGTCTTGCTCTATTACTACTAGTAGTAATATTCGAGTCACTAA
GGGTTGAGGGAAGGGTGTGCCCCCCCACCAACCAGTTTTAGCTGTGTTGG
TGCATCTGGGTTTTATTTTATATATGAGATTTGTCCTCATATTCATGGAG
AAAAATCGCGTGCAGGCAAGACTTGGAGGACTACCTTAAACCTTACCGCT
TACCCCTAGCCTTTCGAGAGTCAAATTGGACCCTGGTAGCGTCTAAAGTC
GTCCAAAAGCTTTGTGGCTCCGCGGGCTGTCAACGATGCTGGAGAGCCAG
GTTCGGCCAGGTTCTTGGAAGGGTTGGGCAATATACCAGAGTCGACCAAG
TGCTGTGAAAACCATGAAAATTTTTATGGACGATGGTAAATAGAACCAAT
AGAGGGGAGTCCCCCAACCCGCTTGTCGTCATCTCATGTCTCCTCCTTCC
CGCCGCATGTTCCGCCGATAGGTGTACTTTCACCGTACTGCCCCGGGGGG
CTGCTGTGACTGCGGTGACGAAGAGGCTTGGGCGGATGATGGATGTTGCA
CGAGGCACAAGCAGCCCACGGGAGACAAGGCGGAGGCGGACCCGCTGTCA
ACCCTTCCCCAAGACTTCCAGGTGGCGTCACGTCTTAAGCGGTTTTTGTG
TTGCAGTTTTGGTGCTTTGGTTGTCGTTGAAGGTGGTGGGGGGGGGTAAC
GTTAGCGTCGCGTAGTGGGTATATCACCACACTGAATGTTGCACGTTCAT
TTCGAGAAAATTTAGGAAAGAGAACAAAGCGTTAAAAAATAATGGGGAAG
AGGAACAGAAAAAAATAAATATATATATAAGGATGATGAACGACGGCCCA
TACTCATTGTCGCCGTTTTGTCTTCTTTCCCTCACGAGTTATGCATCCCC
CCTCCCCCGACCGACCTTGTTCGCAAGGCCTACCGGCATTTGAAACCTTC
CCATTCCTCGAGTTGATCTCTATCCCTGCTACCTCCCCGTCTCGGGCTGA
ACTTGATTATTGCACAAAATATCTCCGATACTGACGCTTCTGGTCAATTG
TCCGTGATGATGACGATGATGATGGTTTGACCTTTTCGTTCCGCGTGAAT
TCAATCTCCAACCATTTGACTAACATAAATTAAACAAGGCCGTCGCCAGG
ATAGTGGTGCGAGGGGTTGTGCTGTTCCTCGCCGGGTTGGCATGGAGCTC
CCTGGACACGTTCGATCCGTCGGCAAATTTTGTTTCGCACGACCGCGGCT
CTGCCGGCCTCGGTGGCGATGGTGGTGGCGGTAGCGGTGGCGGAAGTTCT
GGTCGATACGGGGGCGGCAATGCTTCGACACGAGGTGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig5749:290..8678+

>mRNA_H-paniculata_contig5749.13307.1 ID=mRNA_H-paniculata_contig5749.13307.1|Name=mRNA_H-paniculata_contig5749.13307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1482bp|location=Sequence derived from alignment at H-paniculata_contig5749:290..8678+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTTTGCCGGAAAGGCTAGTCGGGCGAGATGGACGGGTACTATGGGA
TCGGAACAGCAATGGCTTGCTGCCCGACCCCGGCACGCTCGTGCGGGAGA
TTCGCTCGGGGAACGGAGTCACAGATGGCTTTGCCGGAAAGGCTAGTCGG
GCGAGATGGACGGGTACTATGGGATCGGAACAGCAATGGCTTGCTGCCCG
ACCCCGGCACGCTCGTGCGGGAGATTCGCTCGGGGAACGGAGTCACAGAT
CTCTCGCTCTTGCGACAGTGCGTGACGCTAGTGCTGGTGCAGGCGACCCC
GTCATCCCTTGGCACGTGGTGCAGCTGGCTGCTCTGTCTCGCTGATCCTG
GGCCAACCCTGCGGAATTTGCGAGAGAGCAGCGGAGGAAGCAGATCTCTC
GCTCTTGCGACAGTGCGTGACGCTAGTGCTGGTGCAGGCGACCCCGTCAT
CCCTTGGCACGTGGTGCAGCTGGCTGCTCTGTCTCGCTGATCCTGGGCCA
ACCCTGCGGAATTTGCGAGAGAGCAGCGGAGGAAGCAGGGTTTGCGGGTA
CGTGTTCAAGAGGGGAGATATAGCATGGAACTGCCGGAAATGTCAAGTTG
ACAACACGTGCGTGCAGTGCGACACCTGCTTCAGGCTTTCGGATCACACT
GGACATCCGGGTTTGCGGGTACGTGTTCAAGAGGGGAGATATAGCATGGA
ACTGCCGGAAATGTCAAGTTGACAACACGTGCGTGCAGTGCGACACCTGC
TTCAGGCTTTCGGATCACACTGGACATCCGGTGTACTTTCACCGTACTGC
CCCGGGGGGCTGCTGTGACTGCGGTGACGAAGAGGCTTGGGCGGATGATG
GATGTTGCACGAGGCACAAGCAGCCCACGGGAGACAAGGCGGAGGCGGAC
CCGCTGTCAACCCTTCCCCAAGACTTCCAGGTGTACTTTCACCGTACTGC
CCCGGGGGGCTGCTGTGACTGCGGTGACGAAGAGGCTTGGGCGGATGATG
GATGTTGCACGAGGCACAAGCAGCCCACGGGAGACAAGGCGGAGGCGGAC
CCGCTGTCAACCCTTCCCCAAGACTTCCAGGCCGTCGCCAGGATAGTGGT
GCGAGGGGTTGTGCTGTTCCTCGCCGGGTTGGCATGGAGCTCCCTGGACA
CGTTCGATCCGTCGGCAAATTTTGTTTCGCACGACCGCGGCTCTGCCGGC
CTCGGTGGCGATGGTGGTGGCGGTAGCGGTGGCGGAAGTTCTGGTCGATA
CGGGGGCGGCAATGCTTCGACACGAGGTGTGGCCGTCGCCAGGATAGTGG
TGCGAGGGGTTGTGCTGTTCCTCGCCGGGTTGGCATGGAGCTCCCTGGAC
ACGTTCGATCCGTCGGCAAATTTTGTTTCGCACGACCGCGGCTCTGCCGG
CCTCGGTGGCGATGGTGGTGGCGGTAGCGGTGGCGGAAGTTCTGGTCGAT
ACGGGGGCGGCAATGCTTCGACACGAGGTGTG
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