prot_H-paniculata_contig57427.13304.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig57427.13304.1
Unique Nameprot_H-paniculata_contig57427.13304.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length62
Homology
BLAST of mRNA_H-paniculata_contig57427.13304.1 vs. uniprot
Match: A0A6H5KBH1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH1_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.280e-11
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    2 SNLPASQQADLRPRREDEDLSDKPVHSAVGSLIWLSGMTRPDIASAVRAVARQAHNP 58
            S +PA+  ADL P+REDE+  + PV  A+GS++W+S  +RPD++ AVRAVAR AH P
Sbjct:   83 SRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 139          
BLAST of mRNA_H-paniculata_contig57427.13304.1 vs. uniprot
Match: A0A6H5KGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGY9_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.280e-11
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    2 SNLPASQQADLRPRREDEDLSDKPVHSAVGSLIWLSGMTRPDIASAVRAVARQAHNP 58
            S +PA+  ADL P+REDE+  + PV  A+GS++W+S  +RPD++ AVRAVAR AH P
Sbjct:   11 SRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 67          
BLAST of mRNA_H-paniculata_contig57427.13304.1 vs. uniprot
Match: A0A6H5JRS6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS6_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.420e-11
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    2 SNLPASQQADLRPRREDEDLSDKPVHSAVGSLIWLSGMTRPDIASAVRAVARQAHNP 58
            S +PA+  ADL P+REDE+  + PV  A+GS++W+S  +RPD++ AVRAVAR AH P
Sbjct:  147 SRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 203          
BLAST of mRNA_H-paniculata_contig57427.13304.1 vs. uniprot
Match: A0A6H5KPT0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT0_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 2.390e-11
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    2 SNLPASQQADLRPRREDEDLSDKPVHSAVGSLIWLSGMTRPDIASAVRAVARQAHNP 58
            S +PA+  ADL P+REDE+  + PV  A+GS++W+S  +RPD++ AVRAVAR AH P
Sbjct:   83 SRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 139          
BLAST of mRNA_H-paniculata_contig57427.13304.1 vs. uniprot
Match: A0A6H5KCA5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCA5_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 2.460e-11
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    2 SNLPASQQADLRPRREDEDLSDKPVHSAVGSLIWLSGMTRPDIASAVRAVARQAHNP 58
            S +PA+  ADL P+REDE+  + PV  A+GS++W+S  +RPD++ AVRAVAR AH P
Sbjct:   11 SRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 67          
BLAST of mRNA_H-paniculata_contig57427.13304.1 vs. uniprot
Match: A0A6H5K4T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T5_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.460e-11
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    2 SNLPASQQADLRPRREDEDLSDKPVHSAVGSLIWLSGMTRPDIASAVRAVARQAHNP 58
            S +PA+  ADL P+REDE+  + PV  A+GS++W+S  +RPD++ AVRAVAR AH P
Sbjct:  180 SRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 236          
BLAST of mRNA_H-paniculata_contig57427.13304.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.560e-11
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    2 SNLPASQQADLRPRREDEDLSDKPVHSAVGSLIWLSGMTRPDIASAVRAVARQAHNP 58
            S +PA+  ADL P+REDE+  + PV  A+GS++W+S  +RPD++ AVRAVAR AH P
Sbjct:  290 SRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 346          
BLAST of mRNA_H-paniculata_contig57427.13304.1 vs. uniprot
Match: A0A6H5KFN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN5_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.560e-11
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    2 SNLPASQQADLRPRREDEDLSDKPVHSAVGSLIWLSGMTRPDIASAVRAVARQAHNP 58
            S +PA+  ADL P+REDE+  + PV  A+GS++W+S  +RPD++ AVRAVAR AH P
Sbjct:  262 SRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 318          
BLAST of mRNA_H-paniculata_contig57427.13304.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.610e-11
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    2 SNLPASQQADLRPRREDEDLSDKPVHSAVGSLIWLSGMTRPDIASAVRAVARQAHNP 58
            S +PA+  ADL P+REDE+  + PV  A+GS++W+S  +RPD++ AVRAVAR AH P
Sbjct:  638 SRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 694          
BLAST of mRNA_H-paniculata_contig57427.13304.1 vs. uniprot
Match: A0A6H5K274_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K274_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.610e-11
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    2 SNLPASQQADLRPRREDEDLSDKPVHSAVGSLIWLSGMTRPDIASAVRAVARQAHNP 58
            S +PA+  ADL P+REDE+  + PV  A+GS++W+S  +RPD++ AVRAVAR AH P
Sbjct:  514 SRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 570          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig57427.13304.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBH1_9PHAE1.280e-1154.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGY9_9PHAE1.280e-1154.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRS6_9PHAE1.420e-1154.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPT0_9PHAE2.390e-1154.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KCA5_9PHAE2.460e-1154.39Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4T5_9PHAE4.460e-1154.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTL3_9PHAE4.560e-1154.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KFN5_9PHAE4.560e-1154.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K164_9PHAE4.610e-1154.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K274_9PHAE4.610e-1154.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig57427contigH-paniculata_contig57427:572..757 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig57427.13304.1mRNA_H-paniculata_contig57427.13304.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig57427 572..757 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig57427.13304.1 ID=prot_H-paniculata_contig57427.13304.1|Name=mRNA_H-paniculata_contig57427.13304.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=62bp
ESNLPASQQADLRPRREDEDLSDKPVHSAVGSLIWLSGMTRPDIASAVRA
VARQAHNPTGA*
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