prot_H-paniculata_contig57392.13298.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig57392.13298.1
Unique Nameprot_H-paniculata_contig57392.13298.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length67
Homology
BLAST of mRNA_H-paniculata_contig57392.13298.1 vs. uniprot
Match: A0A6H5K8F1_9PHAE (VDE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8F1_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 9.990e-32
Identity = 53/58 (91.38%), Postives = 54/58 (93.10%), Query Frame = 0
Query:   10 QVHFFNSPSPGKLVGKLNWRIKEPDGEFFTRDVVQKFQQDPSNPAHLINKDNEYLHYR 67
            QVHFFNSP PGKLVGKLNWRIKEPDGEFFTRDVVQ F QDP NPAHL+NKDNEYLHYR
Sbjct:  173 QVHFFNSPKPGKLVGKLNWRIKEPDGEFFTRDVVQTFDQDPKNPAHLVNKDNEYLHYR 230          
BLAST of mRNA_H-paniculata_contig57392.13298.1 vs. uniprot
Match: A0A7R9W8D9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W8D9_9STRA)

HSP 1 Score: 105 bits (263), Expect = 6.020e-28
Identity = 45/57 (78.95%), Postives = 48/57 (84.21%), Query Frame = 0
Query:   10 QVHFFNSPSPGKLVGKLNWRIKEPDGEFFTRDVVQKFQQDPSNPAHLINKDNEYLHY 66
            QVHFF   SPGK  GKLNWRI+EPDGEFFTRD +Q+F QDP NPAHLIN DNEYLHY
Sbjct:    8 QVHFFTETSPGKFFGKLNWRIQEPDGEFFTRDALQRFVQDPENPAHLINHDNEYLHY 64          
BLAST of mRNA_H-paniculata_contig57392.13298.1 vs. uniprot
Match: B8C775_THAPS (Diadinoxanthin de-epoxidase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C775_THAPS)

HSP 1 Score: 108 bits (269), Expect = 3.570e-26
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0
Query:   10 QVHFFNSPSPGKLVGKLNWRIKEPDGEFFTRDVVQKFQQDPSNPAHLINKDNEYLHYR 67
            QVHFF   +PGK VGKLNWRI+EPDGEFFTRD VQ+F QDP+NPAHLIN DNEYLHY+
Sbjct:  224 QVHFFTETAPGKFVGKLNWRIEEPDGEFFTRDAVQEFVQDPNNPAHLINHDNEYLHYQ 281          
BLAST of mRNA_H-paniculata_contig57392.13298.1 vs. uniprot
Match: A0A6V0W7S4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V0W7S4_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.650e-25
Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 0
Query:   10 QVHFFNSPSPGKLVGKLNWRIKEPDGEFFTRDVVQKFQQDPSNPAHLINKDNEYLHYR 67
            QVHFF    PGK  GKLNWRI+EPDGEFFTRD +Q+F QDP NPAHLIN DNEYLHY+
Sbjct:  215 QVHFFTETEPGKFFGKLNWRIEEPDGEFFTRDAIQEFYQDPKNPAHLINHDNEYLHYQ 272          
BLAST of mRNA_H-paniculata_contig57392.13298.1 vs. uniprot
Match: A0A7S4NGD3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NGD3_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.640e-24
Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = 0
Query:   10 QVHFFNSPSPGKLVGKLNWRIKEPDGEFFTRDVVQKFQQDPSNPAHLINKDNEYLHY 66
            QVHFF   +PGK  GKLNWRI+EPDGEF+TRD +Q+F QDP NPAHL+N DNEYLHY
Sbjct:  228 QVHFFTETAPGKFFGKLNWRIQEPDGEFYTRDALQRFVQDPENPAHLVNHDNEYLHY 284          
BLAST of mRNA_H-paniculata_contig57392.13298.1 vs. uniprot
Match: A0A7S4AXJ6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AXJ6_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.900e-24
Identity = 43/58 (74.14%), Postives = 47/58 (81.03%), Query Frame = 0
Query:   10 QVHFFNSPSPGKLVGKLNWRIKEPDGEFFTRDVVQKFQQDPSNPAHLINKDNEYLHYR 67
            QVHFF   +PGK  GKLNWRI+EPDGEFFTRD VQ+F QDP  P HLIN DNEYLHY+
Sbjct:  220 QVHFFTETAPGKFYGKLNWRIEEPDGEFFTRDAVQEFVQDPEQPGHLINHDNEYLHYK 277          
BLAST of mRNA_H-paniculata_contig57392.13298.1 vs. uniprot
Match: A0A1E7FV42_9STRA (Violaxanthin de-epoxidase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FV42_9STRA)

HSP 1 Score: 102 bits (253), Expect = 6.030e-24
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    1 PLSHVCFCRQVHFFNSPSPGKLVGKLNWRIKEPDGEFFTRDVVQKFQQDPSNPAHLINKDNEYLHYR 67
            PL  +  C QVHFF   +PGK  GKLNWRI+EPDGEFF RD VQ+F QDP  PAHL+N DNEYLHY+
Sbjct:  220 PLFDIFPC-QVHFFTETAPGKFYGKLNWRIEEPDGEFFNRDAVQEFIQDPKQPAHLVNHDNEYLHYQ 285          
BLAST of mRNA_H-paniculata_contig57392.13298.1 vs. uniprot
Match: A0A448YW88_9STRA (VDE domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YW88_9STRA)

HSP 1 Score: 101 bits (252), Expect = 7.430e-24
Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = 0
Query:   10 QVHFFNSPSPGKLVGKLNWRIKEPDGEFFTRDVVQKFQQDPSNPAHLINKDNEYLHYR 67
            QVHFF   +PGK  GKLNWRI+EPDGEFFTRD +Q+F QDP  P HLIN DNEYLHY+
Sbjct:  219 QVHFFTETAPGKFFGKLNWRIEEPDGEFFTRDAIQEFVQDPEQPGHLINHDNEYLHYQ 276          
BLAST of mRNA_H-paniculata_contig57392.13298.1 vs. uniprot
Match: A0A7S1DA52_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DA52_CYCTE)

HSP 1 Score: 101 bits (251), Expect = 8.210e-24
Identity = 45/66 (68.18%), Postives = 49/66 (74.24%), Query Frame = 0
Query:    1 PLSHVCFCRQVHFFNSPSPGKLVGKLNWRIKEPDGEFFTRDVVQKFQQDPSNPAHLINKDNEYLHY 66
            PL  +  C QVHFF   SPGK  GKLNWRI+EPDGEFF RD +Q+F QDP  P HLIN DNEYLHY
Sbjct:  192 PLFDIFPC-QVHFFTETSPGKFFGKLNWRIEEPDGEFFNRDALQRFVQDPKQPGHLINHDNEYLHY 256          
BLAST of mRNA_H-paniculata_contig57392.13298.1 vs. uniprot
Match: A0A7S2EKH5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EKH5_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.070e-23
Identity = 45/66 (68.18%), Postives = 49/66 (74.24%), Query Frame = 0
Query:    1 PLSHVCFCRQVHFFNSPSPGKLVGKLNWRIKEPDGEFFTRDVVQKFQQDPSNPAHLINKDNEYLHY 66
            PL  +  C QVHFF   SPGK  GKLNWRI EPDGEFFTRD +Q+F QDP  P HL+N DNEYLHY
Sbjct:  244 PLFDIFPC-QVHFFTETSPGKFFGKLNWRIVEPDGEFFTRDALQRFVQDPKQPGHLVNHDNEYLHY 308          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig57392.13298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8F1_9PHAE9.990e-3291.38VDE domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7R9W8D9_9STRA6.020e-2878.95Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
B8C775_THAPS3.570e-2679.31Diadinoxanthin de-epoxidase n=1 Tax=Thalassiosira ... [more]
A0A6V0W7S4_9STRA3.650e-2575.86Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S4NGD3_9STRA2.640e-2473.68Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S4AXJ6_9STRA3.900e-2474.14Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1E7FV42_9STRA6.030e-2467.16Violaxanthin de-epoxidase n=1 Tax=Fragilariopsis c... [more]
A0A448YW88_9STRA7.430e-2472.41VDE domain-containing protein n=1 Tax=Pseudo-nitzs... [more]
A0A7S1DA52_CYCTE8.210e-2468.18Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7S2EKH5_9STRA1.070e-2368.18Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010788VDE lipocalin domainPFAMPF07137VDEcoord: 6..67
e-value: 1.0E-17
score: 64.5
IPR012674CalycinGENE3D2.40.128.20coord: 5..67
e-value: 2.2E-13
score: 52.4
NoneNo IPR availablePANTHERPTHR33970FAMILY NOT NAMEDcoord: 6..67
NoneNo IPR availablePANTHERPTHR33970:SF1VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTICcoord: 6..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig57392contigH-paniculata_contig57392:261..461 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig57392.13298.1mRNA_H-paniculata_contig57392.13298.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig57392 261..461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig57392.13298.1 ID=prot_H-paniculata_contig57392.13298.1|Name=mRNA_H-paniculata_contig57392.13298.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp
PLSHVCFCRQVHFFNSPSPGKLVGKLNWRIKEPDGEFFTRDVVQKFQQDP
SNPAHLINKDNEYLHYR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010788VDE
IPR012674Calycin