|
|
Homology
BLAST of mRNA_H-paniculata_contig5735.13293.1 vs. uniprot
Match: D8LMB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB4_ECTSI) HSP 1 Score: 169 bits (429), Expect = 3.200e-45 Identity = 88/141 (62.41%), Postives = 106/141 (75.18%), Query Frame = 1
Query: 1 NWAGVKASLGPHIVLSPEICVFFSELRRCFPKPSTVSVSSSSTLLITGGGDVTIEALDLDGALVIEVEAGASLLIRNLSVKNDGWVPTRLSAEENRAEGEGGLPEAIRIRGFRYDKRACYRVRVTGGERVIDDVANVGDSG 423
+WAGVKA LGP IV SP VF++EL+ F KPS VSVS++STLL+TGGG+V IE L LDGAL IEV+AGASL+I+ L+VKNDGWVP LS E A EG PEAIRIRGFR DKR + +R+ GER+++D N DSG
Sbjct: 92 DWAGVKAVLGPQIVFSPAFAVFYTELQGRFSKPSAVSVSATSTLLVTGGGEVVIEELVLDGALEIEVQAGASLVIQRLTVKNDGWVPIPLSEAEI-AGDEGEAPEAIRIRGFRLDKRGSHCIRLASGERIVNDRENPDDSG 231
BLAST of mRNA_H-paniculata_contig5735.13293.1 vs. uniprot
Match: A0A6H5K5T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T5_9PHAE) HSP 1 Score: 174 bits (440), Expect = 4.510e-43 Identity = 89/141 (63.12%), Postives = 108/141 (76.60%), Query Frame = 1
Query: 1 NWAGVKASLGPHIVLSPEICVFFSELRRCFPKPSTVSVSSSSTLLITGGGDVTIEALDLDGALVIEVEAGASLLIRNLSVKNDGWVPTRLSAEENRAEGEGGLPEAIRIRGFRYDKRACYRVRVTGGERVIDDVANVGDSG 423
+WAGVKA LGP IV SP VF++EL+ F KPS VSVS++STLL+TGGG+V IE L LDGAL IEV+AGASL+I+ L+VKNDGWVP LS E A EG +PEAIRIRGFR DKR + +R+ GER+++D N GDSG
Sbjct: 505 DWAGVKAVLGPQIVFSPAFAVFYTELQGRFSKPSAVSVSATSTLLVTGGGEVVIEELVLDGALEIEVQAGASLVIQRLTVKNDGWVPIPLSEAEI-AGDEGEVPEAIRIRGFRLDKRGSHSIRLASGERIVNDRQNPGDSG 644
BLAST of mRNA_H-paniculata_contig5735.13293.1 vs. uniprot
Match: A0A7S3Y0F6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0F6_HETAK) HSP 1 Score: 95.9 bits (237), Expect = 1.670e-18 Identity = 67/139 (48.20%), Postives = 82/139 (58.99%), Query Frame = 1
Query: 1 NWAGVKASLGPHIVLSPEICVF--FSELR-RCFPKPSTVSVSSSSTLLITGGGDVTIEALDLDGALVIEVEAGASLLIRNLSVKNDGWVPTRLSAEENRAEGEG-GLPEAIRIRGFRYDKRACYRVRVTG--GERVIDD 399
+AGV A+ P +VL P + LR R P+P V VS STL++ GGGD+T+ +LDLDGAL +EVE GASL IR+L V+N GW E RA GEG EA RIRG+R K V VT GE VID+
Sbjct: 4 EYAGVPAAPLPAVVLGPHLLGAHGLGGLRARLGPRPGDVRVSGRSTLVVRGGGDLTLHSLDLDGALWVEVETGASLTIRHLRVRNAGW--------EVRALGEGEACSEAERIRGYRMVKLEQRDVCVTEDEGEVVIDE 134
BLAST of mRNA_H-paniculata_contig5735.13293.1 vs. uniprot
Match: A0A7S2VZ10_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZ10_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.960e-18 Identity = 53/122 (43.44%), Postives = 72/122 (59.02%), Query Frame = 1
Query: 1 NWAGVKASLGPHIVLSPEICVFFSELRRCFPKPSTVSVSSSSTLLITGGGDVTIEALDLDGALVIEVEAGASLLIRNLSVKNDGWVPTRLSAEENRAEGEGGLPEAIRIRGFRYDKRACYRV 366
+ G++ + GP IVL P+ + E + FP PS V +S+ S+L++ G G V IE+LDLDGALVIE E GAS +IR+L VKN GW + + E E IR+RG+R DK V
Sbjct: 105 KYLGIEVTPGPEIVLGPKFASYPGEFKTRFPNPSKVKISACSSLVVNGNG-VVIESLDLDGALVIECEDGASGVIRDLVVKNKGW---------QKVQDESSDVEIIRMRGYRLDKTETKNV 216
BLAST of mRNA_H-paniculata_contig5735.13293.1 vs. uniprot
Match: A0A7S1H128_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H128_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 3.200e-17 Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = 1
Query: 10 GVKASLGPHIVLSPEICVFFSELRRCFPKPSTVSVSSSSTLLITGGGDVTIEALDLDGALVIEVEAGASLLIRNLSVKNDGWVPTRLSAEE 282
GV A GP IV++PE +E R F P V +SS S+L+I G G +TIE+LDLDGALVI E GA+ ++R L VKNDGW R++AE+
Sbjct: 72 GVSAVFGPEIVVAPESMCCPAEFREVFTSPRNVKISSRSSLVIKGPGKLTIESLDLDGALVINCEIGANAVVRKLKVKNDGW--KRVAAED 160
BLAST of mRNA_H-paniculata_contig5735.13293.1 vs. uniprot
Match: A0A7S4AW45_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AW45_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.480e-15 Identity = 52/142 (36.62%), Postives = 77/142 (54.23%), Query Frame = 1
Query: 4 WAGVKASLGPHIVLSPEICVFFSELRRCFPKPSTVSVSSSSTLLITGGGDVTIEALDLDGALVIEVEAGASLLIRNLSVKNDGWVPTRLSAEENRAEGEGGLPEAIRIRGFRYDKRACYRVRVTGGERVID---DVANVGDS 420
+ G++ GP IV P+ ELR FP P VS+SS STL++ GG V IE+LDLDG LV++ + G ++ I++L VKN+GWV E R E +R+RGF D++ ++ D D +++ DS
Sbjct: 486 YGGIEVVPGPAIVCKPDFACCPGELRVKFPFPEKVSISSRSTLVV-GGSGVVIESLDLDGTLVVDADPGETVTIKDLVVKNEGWVQVPADGESER--------EIVRMRGFVIDRKESEKIEARSSSNKSDSTPDDSSIDDS 618
BLAST of mRNA_H-paniculata_contig5735.13293.1 vs. uniprot
Match: A0A7R9WH70_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WH70_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.280e-14 Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 1 NWAGVKASLGPHIVLSPEICVFFSELRRCFPKPSTVSVSSSSTLLITGGGDVTIEALDLDGALVIEVEAGASLLIRNLSVKNDGWVPTRLSAEENRAEGEGGLPEAIRIRGF 336
+ GV GP IVL P E+ FP P V +S+ S+L++ G G V IE+LDLDGALVI+ E GAS +R+L VKNDGWV + E+ E + +RG+
Sbjct: 35 TYGGVTVVPGPQIVLKPSFVSCPGEIGEKFPSPEKVKISARSSLVVEGKG-VVIESLDLDGALVIKCEEGASGTVRDLVVKNDGWVKVADPSSES---------EVLAMRGY 136
BLAST of mRNA_H-paniculata_contig5735.13293.1 vs. uniprot
Match: B8C430_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C430_THAPS) HSP 1 Score: 88.2 bits (217), Expect = 1.310e-14 Identity = 52/116 (44.83%), Postives = 70/116 (60.34%), Query Frame = 1
Query: 1 NWAGVKASLGPHIVLSPEICVFFSELRRCFPKPSTVSVSSSSTLLITGGGDVTIEALDLDGALVIEVEAGASLLIRNLSVKNDGWVPTRLSAEENRAEGEGGLPEAIRIRGFRYDK 348
++G++ GP VL P +E + F PS V +S S+L++ G G + IE+LDLDGALVIE E GAS +IRNL+VKN GWV +LSAE + E IR+RG+ K
Sbjct: 493 KFSGIEIVSGPDCVLKPSFAACTNEYKNKFTNPSAVKISGRSSLVLRGEG-LVIESLDLDGALVIECEKGASGVIRNLTVKNKGWV--KLSAETS-------TDEVIRMRGYNMIK 598
BLAST of mRNA_H-paniculata_contig5735.13293.1 vs. uniprot
Match: A0A7S2XP05_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XP05_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.840e-14 Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 1
Query: 4 WAGVKASLGPHIVLSPEICVFFSELRRCFPKPSTVSVSSSSTLLITGGGDVTIEALDLDGALVIEVEAGASLLIRNLSVKNDGWVPTRLSAEENRAEGEGGLPEAIRIRGFRYDKRACYRV 366
++G+ GP IVL P +E + FP PS + +S+ S+L++ G G V IE+LDLDGALVIE E GA+ +I++ VKN GWV R++ E + + E I++RG+ +K +V
Sbjct: 71 YSGITVVPGPAIVLKPSFVSCPAEYKTKFPSPSNIKISAKSSLVVKGSG-VVIESLDLDGALVIECEEGATGVIKDFVVKNKGWV--RVADESSTSS------EVIKMRGYHLEKVETAKV 182
BLAST of mRNA_H-paniculata_contig5735.13293.1 vs. uniprot
Match: A0A7S1YRI0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YRI0_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.030e-14 Identity = 49/115 (42.61%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 1 NWAGVKASLGPHIVLSPEICVFFSELRRCFPKPSTVSVSSSSTLLITGGGDVTIEALDLDGALVIEVEAGASLLIRNLSVKNDGWVPTRLSAEENRAEGEGGLPEAIRIRGFRYD 345
++G+ GP IVL P ++ + FP PS++ +S+ S+L+I G G V IE+LDLDGALVI+ E GAS +I +L VKNDGW R + +N E IR+RG+ D
Sbjct: 582 TYSGITIVPGPEIVLKPSFVSCPADYKVKFPNPSSIKISARSSLVINGSG-VVIESLDLDGALVIDCEEGASGVISDLVVKNDGWKKVRDGSRDN---------EIIRMRGYHLD 686
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 169.9 |
| Seed ortholog evalue | 9.7e-40 |
| Seed eggNOG ortholog | 2880.D8LMB4 |
| Preferred name | USP |
| KEGG rclass | RC00002 |
| KEGG ko | ko:K00972,ko:K12447 |
| KEGG Reaction | R00289,R00416,R00502,R01381,R03077,R08845 |
| KEGG Pathway | ko00040,ko00052,ko00053,ko00520,ko01100,ko01130,map00040,map00052,map00053,map00520,map01100,map01130 |
| KEGG Module | M00014,M00361,M00362 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0003824,GO:0003983,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006011,GO:0006082,GO:0006139,GO:0006725,GO:0006793,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009225,GO:0009226,GO:0009555,GO:0009987,GO:0010035,GO:0010038,GO:0010491,GO:0016740,GO:0016772,GO:0016779,GO:0017103,GO:0018130,GO:0019438,GO:0019752,GO:0032501,GO:0032502,GO:0033356,GO:0034641,GO:0034654,GO:0042221,GO:0042995,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046398,GO:0046483,GO:0046686,GO:0047338,GO:0047350,GO:0048229,GO:0048856,GO:0050896,GO:0051748,GO:0052573,GO:0055086,GO:0070569,GO:0071704,GO:0090406,GO:0120025,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901576 |
| EggNOG free text desc. | Utp--glucose-1-phosphate uridylyltransferase |
| EggNOG OGs | COG4284@1,KOG2388@2759 |
| EC | 2.7.7.23,2.7.7.64,2.7.7.83 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
| Exons | 3 |
| Model size | 1803 |
| Cds size | 468 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5735.13293.1 >prot_H-paniculata_contig5735.13293.1 ID=prot_H-paniculata_contig5735.13293.1|Name=mRNA_H-paniculata_contig5735.13293.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=156bp
NWAGVKASLGPHIVLSPEICVFFSELRRCFPKPSTVSVSSSSTLLITGGG
DVTIEALDLDGALVIEVEAGASLLIRNLSVKNDGWVPTRLSAEENRAEGE
GGLPEAIRIRGFRYDKRACYRVRVTGGERVIDDVANVGDSGANGQSGGGT
SCVRC* back to topmRNA from alignment at H-paniculata_contig5735:3954..13240- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5735.13293.1 ID=mRNA_H-paniculata_contig5735.13293.1|Name=mRNA_H-paniculata_contig5735.13293.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9287bp|location=Sequence derived from alignment at H-paniculata_contig5735:3954..13240- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AACTGGGCGGGAGTCAAAGCGTCGCTGGGGCCCCACATAGTTCTAAGTCC
AGAAATTTGTGTATTTTTCTCGGAGCTGAGAAGGTGTTTTCCAAAACCAT
CCACTGTATCTGTATCGTCATCCTCTACATTGCTGATCACTGGGGGAGGG
GACGTGACGATAGAGGCACTGGATCTTGATGGGGCTCTTGTAATCGAGGT
GAGTAGCACTGGCGTAGAACGTATAATTTTGTAAGTGTTGTCATCGATTT
TCACTTTTTATTCTTATTTTTAACGAAAGTGGGATTTTCCCCCCGAACTG
TGTCCATCTCCACCAGTTTAAGAAGCAACTTCCCATGAAAACTGGAGCAC
GGGTACAAAAAGATGTGACTGAAGTAACACCAACTACTACTACTAGTAGT
AGTAATAATAACAATAATATTAATAACAGTAATGAACACCATCAAGAATG
ATGACGAAACGAACGAACCTGAAACAATAAAAACAGGTAGAAGCTGGCGC
GTCACTGCTTATCCGCAATCTCTCCGTGAAAAACGACGGGTGGGTCCCCA
CCCGTTTGTCGGCGGAGGAGAATCGCGCCGAAGGGGAAGGGGGACTACCG
GAAGCGATACGCATTAGAGGATTCCGGTATGACAAGAGGGCGTGCTACCG
CGTTCGGGTGACCGGGGGCGAGAGGTGGGTCGTCGTTGTTTATCCCTTGT
CCACCAGAAGGCAAATTTAAAAGTTACTTCTTCTGGCGAAAATTATTTAG
TATTTTGTGTGGATTTGTTTTCATTGTCTTGTCTTTTTTTCAGTTTGTGT
ATTCTCAAGTCAACATAATAAGAACGAAAATTATTTAGTATTTTGTGTGG
ATTTGTTTTCATTGTCTTGTCTTTTTTTCAGTTTGTGTATTCTCAAGTCA
ACATAATAAGAACCAAAGTCGACATCATTCGGTGAATGCGTGATAGATCA
TGATCACAAATGTTTGTTTCCTCCAGTTATTATCGGCCTGGATTTAATTA
TTTGATTTGCTTGTTTTTGCCGCTCTCACCGATTCCGTTGAAATTTTTCT
GTGTGTGTGTTTGATGAGCTCTTGTCTCGATGCACTGAAAGAGTATATGT
GTAGACGTATCGATATGCACGATATATTTTGTGTCTCATATAGTTATTTT
GATAGGTGCCGTTGTGTCTTGTTGATGGATTCAATTACCGCAAATATATT
ATTGGCGTGTGAACAGCTGCAGCCGTTGGTGTAAATGAATTATACACCCA
TATTCGCAATCCTTGTTGTATAGGGCCAATCGTCCCCCGGCTTAATACAT
CACTCCTGTCTAATGCTTCCAGACTTGATTATAAGCATAAACTGAATAAT
CTATATTCCGGATTCAACAAGTCCTTGCTTGAATTGTTTCTTTCTTGTTG
AAGGAAGAGGTGCGCCGTACAACAGTCGTTTGGTTTCCTGAGTTTCGCAA
TATTGCGGCTTTCGGCACAGTATTGGTCTGATGCAAGGCGACCGCTACCT
CGATCAAGGAAAACGCTTGGATAGAAGCATCGTCTGTTTCGAACCGGACC
AAGCTCGAGTTATTGTTACTGCACAATGTTTGGGCGAATAGGGTGTGCTT
TTTGTTTTAGATTTGTGTGTACTGGTGGTACAGGTCAACAATAATGGCTG
ATCTTATATGGATATCCTCTAAACGATATTTTTTATTCAAGTCCTGAATG
TTTGCAAACATTCCAACCTACCCCGAAACGCCTCATTTGCATTTCACGAT
CACGGTTTTTCTTCTTCGGATGAGCGTTTTTTTGTTGTTTTTTTTAAACG
TTGAGTTATATTTCACACCTCGGATGAAGGGAAGGACAGCGGGCAGTTGT
TCCTCTCCAGGCAAAATTGATAACTTTGTTGAATTGGTATTCATCCTTCG
TACGATGTTTCACCTGCGTTTGCAACGGAATCTTCATCCTTGGTGTGCAA
CTTTGCTTCTGGTGGAACGGAATCGCCGCCCTTGGCAAGAATATTCAAAA
TCATGTTTGTGAAAACCTTTGCCTTCGTGTAGTTTTGATAATCCATGTGT
GACGGCGCCTTATTCATCCTGATATTGTCAACGTGGTGGGGGCACCCTAT
CCTTTGCCTTTGATGCGATGCTCACCTGTGTTTGGACGTTCCGTTGTCCT
TGACATGTTCTTCGTTTTGTCTATTCGGCGTTTTTCGTCCTTCGCAACCA
AAGCACCTCACTACCCGAAAAAGCGGTTGACCTTCATGCAATAATTGAAC
GTATGTCCCCTATCTTCTTCATCGTTCACAGCCATTTTTTTGTGACCTTC
GCAAAACTGTTGACGTTCGTCGCTACTTCCCTCACATGACTCCTTAGTCC
TTCGTCTCTTACCACGAAATATCTTCGTCGCGATTCGTTCTTTGCCGAAC
GGAATTTGTCATGTCTTGCGAGGGAACGTTATGCCGTGTCTTACTCTGCT
CCCATTGATTTCGTACAAGCCAGAGAAGAGCGATAGCTGTGCACACATTT
GCCGCACTTGAAGAATTCGCAATCGATGCTAGTGACAACTATTCCCCGTG
AACTAGTCACTCATCGGCGCAGCATGATAGAGAACCTGGCTCTTCTACAG
AATTTGTCCCTTCTGCAACGTGTTCCATACCAAGGGATGGTTGTCACGAC
TGTTTCCTATGACAAGGGCGATGCTGTCTTCGTCTGTCGAAGTCGATGGT
TGTACAAACATGCCCGCATGCTCTGTTTGTACCGTGGGATCCCTCAACCG
AAACGAGATAGCTTCATCGACCTCATCCGTAGTCATCTTTGGTATGACCT
TCGGGATTGAGTCGTATAAACCATAGAGGAACATCACAATCTCGACGTAG
GCTGGACTGAGGGGTCCACGTTGTTGGCTGACGAGCTTCCCAGCTTCGCC
GAAGTCGCGCTCCAAAACTGTAGACGAGGTTGGCGCACGTAGCACGCTAC
GCGCCGCCTTACTCAGCAATCTAAATTTTTCCCTTCCGTACATGGCCAGA
AGTCGCCCAGCTGCTCCTCGCCAGATAACCCCTGATATTGAGAAGGAATC
TGTACAACGCAGAAGGCAACAAAATATGCATCCTTAGTAAAACAGTGCAT
CACAAAATCGTAAGAAGATCAGGATATACTCGATATAACAGCGGATTTTT
CGAAATAGGTTCGCTTTCAAATTGAGGTCATTTCAACCTCAATTTGAAAG
CGAACCTCATTTCGAGAATCCACTGTTATATATTGCCTGCTTTGTCATGA
CCCTGTTTTAGAAACAGGATGTCAAGCGGCCGACATTGACTGAAGCTCGC
GCCTCGAACAAGGCTACTCCATTAATGAGCCAGGAAGGTGCAGAAGCTGC
ACAGACCTGTAGTGCACTTGACTTTCGACAGTTCAATCAAAAAGTACTTC
TTGAGAAGGCGAAACTCCTCCAGTAACTGACCTTTGCTTCTTGCCAAGCC
TTGATCACATCGTCCACCTCCTCCTACGATATGAGCTCGGTCTCTTCGTC
ATCGTCGTTGCTTCCATTGATAGGTTCATCGTGTATTCCCGAATCCATCA
TGTCCTCCAGCTCATCAGCGTCTCGCTTTGCCCTGAATTTCAGGCACTTC
TGAGCGCTATCAGTCTCATCGCCACGATCTCTTACGGCTGAAACCTCTTC
TCGGGTGGCCACTATCGCTTCCTTCACCAATGAGTTTAGCTGCTTCAACA
ACTTACGCTTCACGATGTGCGTAGAGGTCGGAGACTCCGCCAGACGATCG
ATGTAACCCAACGTGCGCGAATTCGGATTGAGGGCAAGCACCATGTCCAA
CAGATGATTTTCCTCCTTGCACCCTTCCCCCCAGCGTTTTTGTCTGAAAC
GCTTGTATACCGTACCAAACACCTTGGCGTGCGTGTCCTTTCCTGTAGTA
GACAGCTCTTCGTGGGCTTTCTTGAACCGGTTTGCAACCTTTTCTTGCAG
CTTCTCGCCCTGAGCGACTGGCACAGAGAAGTACTTGGCCGGATTGTAAA
GGACACCAGGCTTCTGCACATTCATCTCGGCGGTGAGGAGCATGATGACT
TTCTGAATAGCTGGTGAAGAGGAGATGACACTGGTCGATTGGCTGTTCGC
GATGATCAGCGCTAAGGACTTCATCAAGCTGCACACCTCTTGTACCTGTA
AAAAACACGCGTGCATAGAAGATCAGTTATGACAGCCGCTGCAGGTCCGT
TAGAACACTTTTGAGATTCACCATCGTCGAGCTGTTCAATATTTCAACAT
TTCCACTCTACTATATACGTACTCATACCCATACGGAAATTCTACCATCA
AAAGTCGGCTCGATTTTCCATCCAAAAGTGAAGTATATCATTCAAAGCAG
AAGAGACACATGTCAGAGTGCATCAACAAGCGACGCAATTGATTACTAAC
TAAAGGTTATTCCTTACGCAATTGTATAACGATGCATGCTGAAACGTGCA
CGTGGAATGGTACTGGTACGACGTCACAACGAACTGAGAACCGTCCCTTT
TACGCGTCTTGAACAAGTGGCTACTTGCCTTCGTGGTGTCGGATTTGTTC
ATGTGTTCCACGATTCTCCGGACTTCGATGGAGACTTTGCGGGCTTGTGG
GTTCTTCGATTGTCCCGGAGACAATGCGAGGCCGAAGGACTCGATGATTG
CCCTGTTCACCATGTGTGATATGCACCACTCTTGCAAAACGCTAGGAATG
TTCGAAAACGCGAACTTGAGGTCAGAGCCGCTGTCGGTCACAGTGCCGGC
GACCATTATCCAGTTTAGACGGAACTCCTTCAATACTTGCTCTGCCCACA
GCTGTACAAGCTTCCCAGTTTTTGTCATGGTGCACGAAGCCGTAGGCTTG
TACTCGTTTACAGCGAGAAGGGATATCTTGACTTTGAACTGTTTCGTCAA
GAAAACGACACGGAGACCTGCGAACCGTGCGAAGGTACAGTTAAGGCTTC
GAATTAATTCACAAAGGTAACAAGTGAAAGCTACGCTTCTTGCATGGAAC
GTCTCGCACCACAAGGAGGAAGGGAGAGGGACCTCGATCCTTATCAGGCA
TCAACCGATTTGTTTGAAAGGCGTTACGCCCAGACTTTCTCCAATTCATC
AAAACCGTACGTACGAAGCGAAAAATATCTTCACCTAAAAATGCGTTCCC
ACTTCGGATATGTTCCCATTGGAGTTCAATTGTAGGGTACCCTTCAAGAC
GTTTTGCCTCACCTGTTCATTTGTTCTTGTGGACTGATGTTATGGCAGTC
CATAACGACGTTCACTTCGGAAAGCCCTACTGGGGACGATGCTACCTCCT
TTGCCAACTCTCGCACGAAAGCCGTTTTGGTGGCAAGATACATTTCCGCC
ACGGCTTTCTTCACCTACTGTGGAAACACAAGGTCACATGAACGAAAGAT
ACACGTGGAAAATTTGATGACGGGGACGGGATTATGCTCACACAATCTGC
GAATTTGCAAGGACGGAAAGCTGTGAGAATATATGTCCACATTCCGGAAG
AGGAGAAAAAACATTGGAGAGAAATCTGACAAGGGGAGAGGAACGTAAAG
AGTTAAATGTAAATTTCACTGGCAACAAACAAACGTCGAACATTAGATTT
CCTCACCAAGTTCAAAAGTACAGGGCAGTCAAGCAATCTCAATCGTGCAT
GCACACACTTCGATTCGATATACGTGGACAGTAAACACTCCGTGCTACCT
GCATTTTTCCAGACTTGTCTTCGATAAGTGTACTTACTCAATCTGTATAT
CATCCCCTTCGTGTTGAGCTTGTCGACCTGAAACGACTTGTCCTCAGACC
CCAGTAGCTCCAACGTATTTCGGCGCTCTGCGTTCCCCATGAACGAAAAA
GGTAAGAAGCCGAGAACAGTGTGCGTCTTGACGAAGTCGGGAGTCACAAA
GCGATCCTTGTCGTCGTTGAAAGCCTTACTGGTTCGAATTCGCGATACCC
CTTGCGCCACGTCCGCCTTCCTGTTGAAATGTTTTGAAATCGACGCATTA
TTAATCCACAAGAACATTCACCATCAATCTCAGTAATATGAACGATGAAC
GATGGGCAAATAAATATTGCAGTCGTACTTTTGCAACTGAATACTGAAGC
GTGAGATGCAATACTGAAGCAGCAGTACATGTGGTTCAAGATTATGTTCG
TCATCGGGCACATTTTGTACATGATATAACACTTATAACTTGTGATACAC
TACAGAAGTGCAGATATTACAGATGGTACTTACGAGTAACTCTCTGCAGA
GTACCGTAGCATAGCGAAACAGAATTGAGGATGCTTTACTGTGCAAATAT
TAGAATATGACAGAGTTTGAATGTTCTGCGACATGAGCCCGGATTCCTGT
TCTGTATGTGGTGAATTCACAAAGCGGACACGGACTCGCCTTTTGATGAT
CTCTGCTGTTCTCTGCGACGATACGTGGTGCACATACCACAGATGATCTG
TGGCTGATGACGTGCTGCCACTCGAGAGTTTCAGGAAGATATTTGATATG
CTGTACTTGTTTGTCACCATACAGTACCATCTTCCATTCGGTTTTTTCAC
TCTCTTGCATTTTTCCGTCGAGATCGTTCTTCGCGTGGTCTCCTCCGTCT
TGACCCCATATTCGTAGCTTGAAGATTGGTTAACAGAAGGCGAAGGGACA
ACCGATCGCTTCCATCCACGTGGGCATGTAAAGGCAAATTCTGCCGTAGC
TATCAATTCACGTGATGAGACCAAAGTGTCTAACGGGGATCCGCCGTCGA
CCCGCCGCCTTCGTTGCGGACGGCGAGTACGACGTCGGTGTCTTCTTGCT
CCTCCGAACTTTCCGCATTACCATGGGCGGTCGAATCTGCTGCCTGGGTC
TTGCTCGCTGCAACGGACGTTAAGGTCGCGACTTCGGTGCTCTCAGCAGC
ACATGAAGCAGCCCCATTAGTGTAATTATCAGCTGTCGGTGCCTCCATGG
CACATGATGAGTGAGAGACGTGGGAGCTGTGGCCATGCCAGCGTTCTTAC
TAGAGCAACTTGCCCACCACTACTGTATATTACTGTTCCTTTTCTGAACA
GAATCCGTTGGTGTGGTCGCTAATTTCCCATCAGCCCATGAATTATATAT
CTGATGTGATACTCTTTGTTTAAGGCTCAGTCCATGGATACGAACTATCG
AACCTGTCGTGTGCTGGGTTGCGCTTCGTCGAATCTTTAGGGCACCTTCC
TAGGAAAACCGTCCCTTTGTTAAATATCTTCCATCATACCGTTCACCTTC
ACGGGATGTTTCGAGTAATGTACTGAAACAGCTGTTTCCATCATGTGAGA
TTCAACAACGTGCTTCATCAAACTGTTCTCCTTTATTGGATTTCAGAGAA
CGCGTCGTGGAAGAACCTCTCCGTCATAAAAAATTGCCCAATGTGTTTCG
CCAAATCGTTGTATTCGTTGGTTTTTTGAGATTGCGGTGTGACAAATGTT
GTTCTCAGCATTACATCTTCTTTCACGTGTTCTTGACCTTTTGACCTTTG
TCGGATATTTCGATGAACATACGAATGGCAAGGTTGCCAATGGAATGATG
CTGTCGCTATTTGATGAAAGACGAATGAGACAACGGTTTCTTTCCGTTGT
GCACGTGCTACGGTCAAAGGGGAATGCATTTTTTTCCTTTTCGTTCGTAC
GCAACGGAAGAAGGACGCGGCGGATCTCTCTTTGAACGGCCAGACCGCCG
TCCTTTCCGTTGTATTCTTTCCCTTCGTCCGGGGTGTGCTATAATTGTAC
AGTTATTTTACGTTAATTGAGTTGTATCTGCATGCTTGGACCCGCCTTTC
TTCGACCATGTTGCCCCAATTTGATGTTTCTCCCTTGCTCTTGGTTGGAT
TTCTTCCGACTGTCTTCCGAAGGGTCATCGATGATGTTGCCAACGTGGGC
GACTCTGGGGCTAACGGGCAATCGGGTGGCGGTACGTCTTGTGTCCGCTG
TTGATCACCTGCGTCCATTTATACGGGTGTGAAAGATCTGAGATCTGTGT
GGGTACGGTGGCATGTGTGAGCGCACCGAGGCGTTCGTCGCAGACCATGG
GTTGCATACGTGGCGATGGTGACGAAACAACGATAGCGCATACGGTCCAA
CATGAAATCTGCCGTGTTTGATGATTGCGTTAGAAGAGGAAGGTTTTTTT
TTTAATTATTATGTTCTGATGATGGTTGGAAAACAGAGTATACAGGGTAT
TTGGCCTGTTGAAGAAAAGGGCACCTTCGCGAACGTTTTTTCTTTTTTTT
TTAACGATTGCTGGTGGACAAACAAACCAGGGCGCAGCATGTACTGTGGG
CTGTTGGGCGTTATGTGACGAGATGTGTGTTATCGTGTTTTGTTCCAGAA
AACACAAGTTGATGATCGACCCACCTTTACGAATCAAAGGCTTTTTTTCT
GGTTTGCTTGCTACTGGTTGGGAAACAGAGAAATCAGTCAGTGTGTGTGC
CCTGTTTGGCGTTGCGTGGAAGAGGTCTGTAATGTTTTACATCAGAAGAA
GAAAGAGGACGTGATCGATCCCGTCTTCTTGATTTTGTTGTTTATTGCTA
CCTTGGCCAGGAAACTCAATTGCTCCAGCCAATCAGAGGGTGTTGTGGGG
AGCGTTTTGTGTGCAGCAGAGATAGTTTGTGCGCATGATTCGGAAAATAT
TCAGACGCTGCGAGCAGCTACGGTAGATGACTTGGGGTTTAGCGAGAAGC
ATGCCTGCAGCATTATACCGTGGCCTCGTCGTGCGTCTTTATTCTACGGT
AGCTTTCGATCGCCCTTTTCGTGAACTCACGTACTCATGTGAGATAGCGG
AAACTGTTGCTACGTACAAGAGTACTTGATTGATGCACGGATGTAGGAAG
AGGAGTTGATCAAATGTCACTGTTGACAACTAGCTCCTGTTGTTGCACCC
AGTTGTAACTGTAACTGTATCTGTTTACGGTATCGTTTAAGACCTATTTG
TTGCAATATATTTCATGTATATGTTGGCTGCCTTCGGACAACTTGCCGAG
TCGGATATTGTATCGATTGTTGTGGTTGTACAAGTTATTATGACGTTCGG
GCTCTCATACGAGTAAACATCAATCGCGGACGCCACGTAGGTCGTATATG
GTTGGGCGTCGTGTGGGATAGACTGGACGAGTACAAGATAGTTGATCTCA
CTCCATGAACGCAGTACGTATTGTTGTACAACCAATGGAATATGCCCTTT
GTCGATGACGTTCCGCAGCTTATCGTGTGTTGGCAACGGTGATGCACCTC
TATAGGTCAAACATGATTCAAAAAACAAATATCAAGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig5735:3954..13240- >mRNA_H-paniculata_contig5735.13293.1 ID=mRNA_H-paniculata_contig5735.13293.1|Name=mRNA_H-paniculata_contig5735.13293.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=936bp|location=Sequence derived from alignment at H-paniculata_contig5735:3954..13240- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AACTGGGCGGGAGTCAAAGCGTCGCTGGGGCCCCACATAGTTCTAAGTCC
AGAAATTTGTGTATTTTTCTCGGAGCTGAGAAGGTGTTTTCCAAAACCAT
CCACTGTATCTGTATCGTCATCCTCTACATTGCTGATCACTGGGGGAGGG
GACGTGACGATAGAGGCACTGGATCTTGATGGGGCTCTTGTAATCGAGAA
CTGGGCGGGAGTCAAAGCGTCGCTGGGGCCCCACATAGTTCTAAGTCCAG
AAATTTGTGTATTTTTCTCGGAGCTGAGAAGGTGTTTTCCAAAACCATCC
ACTGTATCTGTATCGTCATCCTCTACATTGCTGATCACTGGGGGAGGGGA
CGTGACGATAGAGGCACTGGATCTTGATGGGGCTCTTGTAATCGAGGTAG
AAGCTGGCGCGTCACTGCTTATCCGCAATCTCTCCGTGAAAAACGACGGG
TGGGTCCCCACCCGTTTGTCGGCGGAGGAGAATCGCGCCGAAGGGGAAGG
GGGACTACCGGAAGCGATACGCATTAGAGGATTCCGGTATGACAAGAGGG
CGTGCTACCGCGTTCGGGTGACCGGGGGCGAGAGGTAGAAGCTGGCGCGT
CACTGCTTATCCGCAATCTCTCCGTGAAAAACGACGGGTGGGTCCCCACC
CGTTTGTCGGCGGAGGAGAATCGCGCCGAAGGGGAAGGGGGACTACCGGA
AGCGATACGCATTAGAGGATTCCGGTATGACAAGAGGGCGTGCTACCGCG
TTCGGGTGACCGGGGGCGAGAGGGTCATCGATGATGTTGCCAACGTGGGC
GACTCTGGGGCTAACGGGCAATCGGGTGGCGGTACGTCTTGTGTCCGCTG
TTGAGGTCATCGATGATGTTGCCAACGTGGGCGACTCTGGGGCTAACGGG
CAATCGGGTGGCGGTACGTCTTGTGTCCGCTGTTGA back to top
|