prot_H-paniculata_contig57344.13292.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig57344.13292.1
Unique Nameprot_H-paniculata_contig57344.13292.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length44
Homology
BLAST of mRNA_H-paniculata_contig57344.13292.1 vs. uniprot
Match: D7G0H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H2_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 3.310e-15
Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = 0
Query:    1 QLLGRQDPYLKLYVGRGGTKVKTKVHIDGSRKASWDETFKFDLQ 44
            Q++GRQDPYLKL+VGR GTKVKTKVH DG + A+W+ETF FDLQ
Sbjct:   24 QMIGRQDPYLKLWVGRAGTKVKTKVHEDGGKVATWNETFVFDLQ 67          
BLAST of mRNA_H-paniculata_contig57344.13292.1 vs. uniprot
Match: A0A6H5L027_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L027_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 4.490e-15
Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    1 QLLGRQDPYLKLYVGRGGTKVKTKVHIDGSRKASWDETFKFDLQ 44
            QL+GRQDPYLKL+ GR GTKVKTKVH DG + A+W+ETF FDLQ
Sbjct:   24 QLIGRQDPYLKLWAGRAGTKVKTKVHEDGGKVATWNETFAFDLQ 67          
BLAST of mRNA_H-paniculata_contig57344.13292.1 vs. uniprot
Match: A0A835YV56_9STRA (C2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV56_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 4.830e-9
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 QLLGRQDPYLKLYVGRGGTKVKTKVHIDGSRKASWDETFKFDL 43
            QL+G QDPYLKL+ G GG  ++TKVH DG   A W++ F FD+
Sbjct:   20 QLIGTQDPYLKLWAGSGGDVLRTKVHTDGGSSAVWNQRFVFDV 62          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig57344.13292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0H2_ECTSI3.310e-1575.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L027_9PHAE4.490e-1575.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YV56_9STRA4.830e-955.81C2 domain-containing protein n=1 Tax=Tribonema min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 1..44
e-value: 3.5E-7
score: 32.1
IPR000008C2 domainPFAMPF00168C2coord: 4..43
e-value: 7.5E-6
score: 26.2
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 3..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig57344contigH-paniculata_contig57344:788..919 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig57344.13292.1mRNA_H-paniculata_contig57344.13292.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig57344 788..919 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig57344.13292.1 ID=prot_H-paniculata_contig57344.13292.1|Name=mRNA_H-paniculata_contig57344.13292.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=44bp
QLLGRQDPYLKLYVGRGGTKVKTKVHIDGSRKASWDETFKFDLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom