prot_H-paniculata_contig5733.13291.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5733.13291.1 vs. uniprot
Match: A0A7R8W6R0_9CRUS (Replication protein A subunit n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8W6R0_9CRUS) HSP 1 Score: 57.0 bits (136), Expect = 5.870e-8 Identity = 27/53 (50.94%), Postives = 40/53 (75.47%), Query Frame = 0
Query: 2 QVSDFNGRSLSAFNSTVLVINPEVPETEELQAWFSTAGSGSSFKSVSIKGSGG 54
+VSDFNGRSLSA NST++ INP++ E LQAW+++ G + +S++ +G GG
Sbjct: 378 KVSDFNGRSLSALNSTMIQINPDIDEAHRLQAWYTSEGCQQAPRSLTEQGRGG 430
BLAST of mRNA_H-paniculata_contig5733.13291.1 vs. uniprot
Match: A0A453INJ1_AEGTS (Replication protein A subunit n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453INJ1_AEGTS) HSP 1 Score: 55.1 bits (131), Expect = 2.790e-7 Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 0
Query: 1 LQVSDFNGRSLSAFNSTVLVINPEVPETEELQAWFSTAGSGSSFKSV 47
L+VSDF G S+S + LVINPE+PETE+L+AW+ + G G++ SV
Sbjct: 399 LKVSDFQGVSVSTVGKSTLVINPELPETEKLRAWYESEGKGTALASV 445
BLAST of mRNA_H-paniculata_contig5733.13291.1 vs. uniprot
Match: A0A3B6ITQ5_WHEAT (Replication protein A subunit n=8 Tax=Triticinae TaxID=1648030 RepID=A0A3B6ITQ5_WHEAT) HSP 1 Score: 55.1 bits (131), Expect = 2.790e-7 Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 0
Query: 1 LQVSDFNGRSLSAFNSTVLVINPEVPETEELQAWFSTAGSGSSFKSV 47
L+VSDF G S+S + LVINPE+PETE+L+AW+ + G G++ SV
Sbjct: 353 LKVSDFQGVSVSTVGKSTLVINPELPETEKLRAWYESEGKGTTLTSV 399
BLAST of mRNA_H-paniculata_contig5733.13291.1 vs. uniprot
Match: A0A3B6JK64_WHEAT (Replication protein A subunit n=15 Tax=Triticeae TaxID=147389 RepID=A0A3B6JK64_WHEAT) HSP 1 Score: 55.1 bits (131), Expect = 2.800e-7 Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 0
Query: 1 LQVSDFNGRSLSAFNSTVLVINPEVPETEELQAWFSTAGSGSSFKSV 47
L+VSDF G S+S + LVINPE+PETE+L+AW+ + G G++ SV
Sbjct: 383 LKVSDFQGVSVSTVGKSTLVINPELPETEKLRAWYESEGKGTALASV 429
BLAST of mRNA_H-paniculata_contig5733.13291.1 vs. uniprot
Match: S8E2K2_FOMPI (Replication protein A subunit n=1 Tax=Fomitopsis pinicola (strain FP-58527) TaxID=743788 RepID=S8E2K2_FOMPI) HSP 1 Score: 54.7 bits (130), Expect = 3.820e-7 Identity = 23/53 (43.40%), Postives = 38/53 (71.70%), Query Frame = 0
Query: 3 VSDFNGRSLSAFNSTVLVINPEVPETEELQAWFSTAGSGSSFKSVSIKGSGGG 55
VSDF GRSLS F+++++ +NP++PE L+ W+ AGSG ++++ S +G G
Sbjct: 369 VSDFGGRSLSMFSTSIMQVNPDIPEAHALRGWYDAAGSGQTYQAYSNANAGAG 421
BLAST of mRNA_H-paniculata_contig5733.13291.1 vs. uniprot
Match: A0A4Y9YET0_9APHY (Replication protein A subunit n=2 Tax=Fomitopsidaceae TaxID=1769247 RepID=A0A4Y9YET0_9APHY) HSP 1 Score: 53.9 bits (128), Expect = 7.150e-7 Identity = 24/54 (44.44%), Postives = 37/54 (68.52%), Query Frame = 0
Query: 3 VSDFNGRSLSAFNSTVLVINPEVPETEELQAWFSTAGSGSSFKSVSIKGSGGGS 56
VSDF GRSLS F ++++ NP++PE L+ W+ AGS ++++ S G+G GS
Sbjct: 368 VSDFGGRSLSMFTTSIMQANPDIPEAHALRGWYDAAGSAQTYQAYSNAGAGAGS 421
BLAST of mRNA_H-paniculata_contig5733.13291.1 vs. uniprot
Match: A0A7R8W5E0_9CRUS (Replication protein A subunit n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8W5E0_9CRUS) HSP 1 Score: 53.5 bits (127), Expect = 9.750e-7 Identity = 25/53 (47.17%), Postives = 38/53 (71.70%), Query Frame = 0
Query: 2 QVSDFNGRSLSAFNSTVLVINPEVPETEELQAWFSTAGSGSSFKSVSIKGSGG 54
+VSDFNGRSLS N T++ INP++ E LQAW+++ G + +S++ +G GG
Sbjct: 290 KVSDFNGRSLSVLNRTMIQINPDIDEAHRLQAWYTSEGCQQAPRSLTEQGRGG 342
BLAST of mRNA_H-paniculata_contig5733.13291.1 vs. uniprot
Match: A0A4P9XSL6_9FUNG (Replication protein A subunit n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XSL6_9FUNG) HSP 1 Score: 53.5 bits (127), Expect = 9.780e-7 Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 0
Query: 2 QVSDFNGRSLSAFNSTVLVINPEVPETEELQAWFSTAGSGSSFKSVS 48
+V DF GRSLS +S++L +NP+VPET L+ W+ T G +SF S
Sbjct: 363 RVGDFQGRSLSVLSSSILSLNPDVPETHRLRGWYDTGGRNASFNGFS 409
BLAST of mRNA_H-paniculata_contig5733.13291.1 vs. uniprot
Match: A0A8J5TA72_ZIZPA (Uncharacterized protein n=4 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5TA72_ZIZPA) HSP 1 Score: 53.1 bits (126), Expect = 1.340e-6 Identity = 23/47 (48.94%), Postives = 35/47 (74.47%), Query Frame = 0
Query: 1 LQVSDFNGRSLSAFNSTVLVINPEVPETEELQAWFSTAGSGSSFKSV 47
L+VSDF G SLS + + +V NP++PET++L+AW+ + G G+S SV
Sbjct: 387 LKVSDFQGVSLSTVSKSTIVANPDLPETQQLRAWYDSEGKGTSMASV 433
BLAST of mRNA_H-paniculata_contig5733.13291.1 vs. uniprot
Match: RFA1B_ORYSJ (Replication protein A 70 kDa DNA-binding subunit B n=11 Tax=Oryza TaxID=4527 RepID=RFA1B_ORYSJ) HSP 1 Score: 53.1 bits (126), Expect = 1.340e-6 Identity = 22/47 (46.81%), Postives = 34/47 (72.34%), Query Frame = 0
Query: 1 LQVSDFNGRSLSAFNSTVLVINPEVPETEELQAWFSTAGSGSSFKSV 47
L+VSDF G SLS + +V+NP++PE E+L+AW+ + G G+S S+
Sbjct: 391 LKVSDFQGLSLSTVGRSTIVVNPDLPEAEQLRAWYDSEGKGTSMASI 437 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5733.13291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig5733.13291.1 ID=prot_H-paniculata_contig5733.13291.1|Name=mRNA_H-paniculata_contig5733.13291.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=61bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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