mRNA_H-paniculata_contig573.13289.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig573.13289.1 vs. uniprot
Match: A0A6H5L5K3_9PHAE (TLC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5K3_9PHAE) HSP 1 Score: 234 bits (597), Expect = 1.530e-75 Identity = 109/137 (79.56%), Postives = 123/137 (89.78%), Query Frame = 1
Query: 1 RQNSFYADGWAARVHDDVNLGVLAVMSLVAAWSMYQGDTWTQYALTQFAAGYMVLDGCWIFCNRAGVKSPRTVMGHHMATLSVLIDPLLQRQHAFYTACALLVEFNTFLLILRRRVTWGRYLEIPFALSWVALRLIW 411
+Q S Y DG AAR+HDD+NL VLA M+L+AAW+M++GD WTQYALT FAAGYMVLD CWI CN +GVKSPRTV+GHH+ATLSVL+DPLLQ QHAFYTACALLVEFNTFLLILRRRV+WG LE+PFALSWVALRLIW
Sbjct: 54 KQKSMYVDGLAARIHDDMNLAVLAGMALMAAWAMWKGDRWTQYALTLFAAGYMVLDACWILCNPSGVKSPRTVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIW 190
BLAST of mRNA_H-paniculata_contig573.13289.1 vs. uniprot
Match: A0A835Z8V7_9STRA (TLC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V7_9STRA) HSP 1 Score: 153 bits (386), Expect = 7.280e-43 Identity = 79/131 (60.31%), Postives = 89/131 (67.94%), Query Frame = 1
Query: 25 GWAARVHDDVNLGVLAVMSLVAAWSMYQGDTWTQYALTQFAAGYMVLDGCWIFCNRAGVKSPRTVMGHHMATLSVLIDPLLQRQHAFYTACALLVEFNTFLLILRRRVTWGR--YLEIPFALSWVALRLIW 411
G A++HDD+NL VL M+L + +MY D QY LT FA YMV D WI CN VKSPRTV+GHH ATL+VLIDP + QHA YT ALLVE NTFLLI RRR WG +E PF SWVALRLIW
Sbjct: 59 GRGAQLHDDMNLVVLLGMALTSMVAMYTRDRALQYGLTVFAVAYMVTDAAWILCNMRAVKSPRTVLGHHAATLAVLIDPYMHPQHALYTCWALLVEANTFLLIARRRFRWGASALVEAPFVASWVALRLIW 189
BLAST of mRNA_H-paniculata_contig573.13289.1 vs. uniprot
Match: A0A7S4PA72_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PA72_GUITH) HSP 1 Score: 110 bits (274), Expect = 9.210e-27 Identity = 62/137 (45.26%), Postives = 83/137 (60.58%), Query Frame = 1
Query: 1 RQNSFYADGWAARVHDDVNLGVLAVMSLVAAWSMYQGDTWTQYALTQFAAGYMVLDGCWIFCNRAGVKSPRTVMGHHMATLSVLIDPLLQRQHAFYTACALLVEFNTFLLILRRRVTWGRYLEIPFALSWVALRLIW 411
RQ+ + A+ +HD+VNL L ++ A ++ D LT Y++LD WIF VKSP V HH+ATL VL+DPLLQ +H YT+ LLVE NT LL+LRRRV++ +E+PF L+WV LR IW
Sbjct: 57 RQSLSWQPSPASDLHDNVNLIALFLLGGGAIAALALQDRNMHDLLTVSGFVYILLDSVWIFSQPKIVKSPGMVGSHHIATLLVLLDPLLQPKHRVYTSACLLVEINTLLLLLRRRVSYSAIVEVPFILTWVLLRNIW 193
BLAST of mRNA_H-paniculata_contig573.13289.1 vs. uniprot
Match: A0A7S0VYL2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VYL2_9CRYP) HSP 1 Score: 108 bits (269), Expect = 3.970e-26 Identity = 52/127 (40.94%), Postives = 78/127 (61.42%), Query Frame = 1
Query: 31 AARVHDDVNLGVLAVMSLVAAWSMYQGDTWTQYALTQFAAGYMVLDGCWIFCNRAGVKSPRTVMGHHMATLSVLIDPLLQRQHAFYTACALLVEFNTFLLILRRRVTWGRYLEIPFALSWVALRLIW 411
A+ +HD NL VL+++ + +++ + LT Y++LD W+ VKSP V+ HH ATL VL+DPLL H+ YT+ LLVE NT LL+LRR++++ +E+PF +SWV LR +W
Sbjct: 50 ASELHDSCNLFVLSLLGFGSVYALLTNHQASHRLLTTVGFMYVLLDSAWLLAVPTVVKSPGVVIAHHAATLLVLLDPLLSPSHSVYTSACLLVEINTLLLLLRRKMSYSVLVEVPFIISWVLLRNVW 176
BLAST of mRNA_H-paniculata_contig573.13289.1 vs. uniprot
Match: A0A7S2V1S4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S4_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.170e-21 Identity = 53/140 (37.86%), Postives = 80/140 (57.14%), Query Frame = 1
Query: 25 GW----AARVHDDVNLGVLAVMSLVAAWSMYQGDTWTQYA--LTQFAAGYMVLDGCWIFCNRAGVKSPRTVMGHHMATLSVLIDPLLQR-----QHAFYTACALLVEFNTFLLILRRRVTWGRYLEIPFALSWVALRLIW 411
GW + +HD +NL L V++ +A + T +T Y+ LD WIF + +KSP TV HH++TL++L+ P+ +YTA A++VE NT LL +RR+ +G ++EIPFALSWV +RL+W
Sbjct: 37 GWNPSKLSELHDSINLVWLTVLASLAIVVLLSFPTCHSLLVLMTTLTTVYIALDAIWIFMFPSSIKSPVTVCLHHISTLAILLGPIFNAISGSGLQGYYTAAAIIVEANTVLLTMRRKFKFGLWVEIPFALSWVLIRLVW 176
BLAST of mRNA_H-paniculata_contig573.13289.1 vs. uniprot
Match: A0A7S2B6S7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6S7_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 6.000e-21 Identity = 50/127 (39.37%), Postives = 76/127 (59.84%), Query Frame = 1
Query: 31 AARVHDDVNLGVLAVMSLVAAWSMYQGDTWTQYALTQFAAGYMVLDGCWIFCNRAGVKSPRTVMGHHMATLSVLIDPLLQRQHAFYTACALLVEFNTFLLILRRRVTWGRYLEIPFALSWVALRLIW 411
AA +HD++N+ + +++ AA+S+ G +T A Y++ D W+ VKSP ++ HH+ TL+VL DP+ H Y +CALLVE NT L+ LRRR+ + E+ F +W+ALRLIW
Sbjct: 11 AADLHDNINVVITSLIFFSAAFSL-AGLPPGHTVVTFGATAYIIFDIVWVMSQPRIVKSPVEIILHHLGTLAVLYDPITVLNHQKYASCALLVEVNTVLITLRRRLGRPMWCEVSFLATWLALRLIW 136
BLAST of mRNA_H-paniculata_contig573.13289.1 vs. uniprot
Match: A0A812KK43_9DINO (NMA1 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812KK43_9DINO) HSP 1 Score: 82.4 bits (202), Expect = 2.590e-16 Identity = 45/128 (35.16%), Postives = 71/128 (55.47%), Query Frame = 1
Query: 31 AARVHDDVNLGVLAVMSLVAAWSMYQGDTWTQYALT-QFAAGYMVLDGCWIFCNRAGVKSPRTVMGHHMATLSVLIDPLLQRQHAFYTACALLVEFNTFLLILRRRVTWGRYLEIPFALSWVALRLIW 411
A +HD VN+ L + ++A ++ G+ + + + A Y+V D WI VK+P +V+ HH+ TL V+++P+ H + ALLVE NT LL LRR + + E+ F L+W +RLIW
Sbjct: 16 AGLLHDWVNVAALTAIFALSAAALESGEESSLHTIVIAVTAAYLVSDALWIALQPDMVKTPVSVILHHLVTLIVIVEPMFYESHRVNASRALLVEINTVLLTLRRLLGRPAWCELGFYLTWAVIRLIW 143
BLAST of mRNA_H-paniculata_contig573.13289.1 vs. uniprot
Match: A0A812JJT5_9DINO (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812JJT5_9DINO) HSP 1 Score: 82.4 bits (202), Expect = 1.290e-15 Identity = 45/128 (35.16%), Postives = 71/128 (55.47%), Query Frame = 1
Query: 31 AARVHDDVNLGVLAVMSLVAAWSMYQGDTWTQYALT-QFAAGYMVLDGCWIFCNRAGVKSPRTVMGHHMATLSVLIDPLLQRQHAFYTACALLVEFNTFLLILRRRVTWGRYLEIPFALSWVALRLIW 411
A +HD VN+ L + ++A ++ G+ + + + A Y+V D WI VK+P +V+ HH+ TL V+++P+ H + ALLVE NT LL LRR + + E+ F L+W +RLIW
Sbjct: 16 AGLLHDWVNVAALTAIFALSAAALESGEESSLHTIVIAVTAAYLVSDALWIALQPDMVKTPVSVILHHLVTLIVIVEPMFYESHRVNASRALLVEINTVLLTLRRLLGRPAWCELGFYLTWAVIRLIW 143
BLAST of mRNA_H-paniculata_contig573.13289.1 vs. uniprot
Match: A0A7S0ASE2_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0ASE2_9DINO) HSP 1 Score: 73.6 bits (179), Expect = 5.910e-13 Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = 1
Query: 43 HDDVNLGVLAVMSLVAAWSMYQG-DTWTQYALTQFAAGYMVLDGCWIFCNRAGVKSPRTVMGHHMATLSVLIDPLLQRQHAFYTACALLVEFNTFLLILRRRVTWGRYLEIPFALSWVALRLIW 411
HD VN+ L ++ +A+ S++ G D+ + F + Y+V D W+ A V++P +++ HH+ TL V+ + H + ALLVE NT LL LRRR+ + E F +W LRL+W
Sbjct: 28 HDWVNVVTLCLIFAMASASLWSGEDSLGHTMVVVFTSTYLVCDIVWVTLQPAIVRTPGSIVAHHVVTLVVIYGTVENVTHRVNASRALLVEINTVLLTLRRRLGRPVWCEAAFYATWGLLRLVW 151
BLAST of mRNA_H-paniculata_contig573.13289.1 vs. uniprot
Match: A0A7S4SFB9_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SFB9_9DINO) HSP 1 Score: 72.8 bits (177), Expect = 1.630e-12 Identity = 45/128 (35.16%), Postives = 69/128 (53.91%), Query Frame = 1
Query: 43 HDDVNLGVLAVMSLVAAWSMYQGD-----TWTQYALTQFAAGYMVLDGCWIFCNRAGVKSPRTVMGHHMATLSVLIDPLLQRQHAFYTACALLVEFNTFLLILRRRVTWGRYLEIPFALSWVALRLIW 411
HD VN+ VL+++ +AA S+ G+ TW + + Y+VLD W+ A V++P +++ HH+ TL V+ + H + ALLVE NT L LRRR+ + E F +W LRL+W
Sbjct: 59 HDLVNIVVLSLIFSLAAGSLCLGEDSSGHTW----VVVVTSVYLVLDTVWVALQPAIVRTPGSIIAHHVVTLLVICGTVENVMHRVNASRALLVEINTVFLTLRRRLGRPVWCEAAFYATWGILRLVW 182 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig573.13289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig573.13289.1 >prot_H-paniculata_contig573.13289.1 ID=prot_H-paniculata_contig573.13289.1|Name=mRNA_H-paniculata_contig573.13289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp RQNSFYADGWAARVHDDVNLGVLAVMSLVAAWSMYQGDTWTQYALTQFAAback to top mRNA from alignment at H-paniculata_contig573:33135..35468+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig573.13289.1 ID=mRNA_H-paniculata_contig573.13289.1|Name=mRNA_H-paniculata_contig573.13289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2334bp|location=Sequence derived from alignment at H-paniculata_contig573:33135..35468+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig573:33135..35468+ >mRNA_H-paniculata_contig573.13289.1 ID=mRNA_H-paniculata_contig573.13289.1|Name=mRNA_H-paniculata_contig573.13289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=828bp|location=Sequence derived from alignment at H-paniculata_contig573:33135..35468+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |