prot_H-paniculata_contig573.13288.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig573.13288.1
Unique Nameprot_H-paniculata_contig573.13288.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length145
Homology
[Close]
BLAST of mRNA_H-paniculata_contig573.13288.1 vs. uniprot
Match: D8LSQ9_ECTSI (Similar to kinesin-C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSQ9_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 2.080e-28
Identity = 69/124 (55.65%), Postives = 82/124 (66.13%), Query Frame = 0 
Query:   22 PTSKKQRHMIQAPGSSTGAMLVGSSKPLGGSLRKQEEMAKFFEHAKAQSSVEYVPRACAEKILKQVHLDAEETKIRHQDVMSTLEATYHQIDENTRRHYSTLIVRLQMEMRVELRRLAKERKEQ 145
            P SK+     +   SS GA ++GSSK LG    K EEM KF +H K Q    YVP  CAEKIL+Q    AEETK RHQ+V+ TL+ATY  I++ T RHY+ LI+RLQ EMR ELRRLAKE K Q
Sbjct:   81 PGSKEALFKRRISASSAGAAVLGSSKDLGIESEKHEEMQKFMDHIKQQPRATYVPMGCAEKILEQAGATAEETKTRHQNVVVTLDATYRAINQRTTRHYADLILRLQQEMRTELRRLAKESKTQ 204
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig573.13288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSQ9_ECTSI2.080e-2855.65Similar to kinesin-C n=1 Tax=Ectocarpus siliculosu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 124..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig573contigH-paniculata_contig573:22646..26426 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig573.13288.1mRNA_H-paniculata_contig573.13288.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig573 22646..26426 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig573.13288.1 ID=prot_H-paniculata_contig573.13288.1|Name=mRNA_H-paniculata_contig573.13288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=145bp
QVLGPPQWNATTDVVIGDDGAPTSKKQRHMIQAPGSSTGAMLVGSSKPLG
GSLRKQEEMAKFFEHAKAQSSVEYVPRACAEKILKQVHLDAEETKIRHQD
VMSTLEATYHQIDENTRRHYSTLIVRLQMEMRVELRRLAKERKEQ
back to top