prot_H-paniculata_contig5729.13285.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5729.13285.1
Unique Nameprot_H-paniculata_contig5729.13285.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length509
Homology
BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: D8LFM8_ECTSI (Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFM8_ECTSI)

HSP 1 Score: 580 bits (1496), Expect = 1.360e-202
Identity = 318/488 (65.16%), Postives = 366/488 (75.00%), Query Frame = 0
Query:   61 PLHSHNVVRKAVLFLGCLLSGRLVLVNGFFVRAPAVGPSFP----TCHHGRCSFAG--------------IGQMRCSA-SAPVAAAE--ALEIDEADDLDFTVEVLTVGSGEGGKRLDAFLATRMPEQSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPP-------VDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRIYPQVDDEHPEWLEGGAVPGKEKEEEN-------DEDKSSPGY------VPKDLRDYSL 507
            PL     V +AVLFL  LL G   LV+GFFV    V  S P       HG   F                +GQ RC+A SA +AAA   A E +  +++ F  E+LTV  GEGGKRLD+FL  RMPEQSRSYFGGLCQLGMVLVGGK +KKSV+VEEGQEVEVRF++SPELSL+GE+IPLDIL+EDD+IIA+SKPAGMVVHPAPGSWNGTFVNALV+HL +   + +           + DGEH PSLRPG+VHRLDKGTTGVLLAAKNPTMQAKLA LFA+R I KSYLAVCVGNPG+AA IDVPIGRHPR RQRMVAVPTIQPNI+SRRALSVV+T AFDGKLSV EV IETGRTHQIRVH+QHRRTPVLGDEVYGN DWNRRL+QSTG+TRPLLHA+SLEF+HP TG+++SL APLP D+ AVVRRIYPQV+DEHPEWL+     G ++   +       DED  S         VP++LR+Y +
Sbjct:    7 PLLLPTAVYRAVLFLW-LLEG---LVSGFFVGTLRV--SLPRAKHVAQHGSADFGQRGGAAAPAVSMPVLVGQRRCNAGSAALAAARDVAPEEEVEEEIAFNTEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKTAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNGLGVAEAAFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWLQDTTATGDDERNSSSVEGGSADEDTDSSAAARSDVDVPEELREYRI 488          
BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA)

HSP 1 Score: 399 bits (1025), Expect = 1.890e-132
Identity = 206/351 (58.69%), Postives = 262/351 (74.64%), Query Frame = 0
Query:  133 DEADDLDFTVEVLTVGSGEGGKRLDAFLATRMPEQSRSYFGGLCQLGMVLVGGKNS-KKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRIYPQVDDEHPEWL-EGGAVPG 481
            D  +D  F V V      + G+R+DAFL +++P+QSR+YFG LC  G V V G ++ KKS +V  GQ + VRF+ + EL+L  E+IPLD++FED +++AI+KP GMVVHPAPG+WNGTFVNAL++HL++     S       GE    LRPGVVHRLDKGT+GVLLAAK P MQ +L+ LF +R+++K+YLAVC GNPG+ A IDVPIGRH  +RQ+MVAVP IQP  ++RRALS V   AFDG LSV EV IETGRTHQIRVH+QHRRTP++GDE+YGN+DWNRRLQ+  G++RPLLHA  LEF HP TG  + L APLP+D+A++VR +YP   +EHP W  EGG   G
Sbjct:   44 DADEDEIFDVSVFEADLADAGQRIDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSAVKKSHKVTAGQIISVRFLATAELNLGPEDIPLDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSKDGSVVSL------GES-GDLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAVCAGNPGDDA-IDVPIGRHATNRQKMVAVPDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRLQKR-GISRPLLHALRLEFTHPTTGAALRLEAPLPEDMASIVRGVYPVAIEEHPGWFGEGGEAGG 385          
BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK)

HSP 1 Score: 371 bits (952), Expect = 1.820e-121
Identity = 187/349 (53.58%), Postives = 248/349 (71.06%), Query Frame = 0
Query:  127 AEALEIDEADDLDFTVEVLTVGSGEGGKRLDAFLATRMPEQSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNI-QSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRIYPQVDDEHPEWL 474
            A +  +D  DD D   E + VG     KRLDAFL+   PEQSRSYFG LCQ G+V VGG+  KKS ++  GQEV V F+ + E++ E E+IPLDIL+ED+ +IA++KP GMVVHPAPGSW+GTF NAL +H+  +  ++      +      +LRPG+VHRLDKGT+GVLLA+KN    AKL+ +FA R+IKK+YLAVCVGNPG+   I+  I RHP++RQ+M  +   Q    ++R A+++V   +FD +LS+  V IETGRTHQIRVH+ HRRTPVLGDE+YGN D NRR  +  G+ RPLLHA  LE +HP TG+ +SL AP+P+D+  V+ +IYPQV+DE P+ L
Sbjct:   51 ASSATLDRTDDDDLQEETVIVGEEYNKKRLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRAVKKSEKLRAGQEVSVAFLPTAEMAAEPEDIPLDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRGEDY------RAAGGGDALRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQNRRAVKRFGLQRPLLHAYQLELDHPITGEPLSLKAPVPEDMVRVLAKIYPQVEDEQPDML 393          
BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: B7GAM3_PHATC (Pseudouridine synthase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAM3_PHATC)

HSP 1 Score: 301 bits (770), Expect = 2.850e-95
Identity = 162/334 (48.50%), Postives = 213/334 (63.77%), Query Frame = 0
Query:  154 KRLDAFLATRMPEQSRSYFGGLC---QLGMVLVGGKN---SKKSVQVEEGQEVEVRFVVSPELS-LEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTI-QPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRIYPQVDDEHPEWLEGGAV 479
            KR+DA LA   PE SRS+ G L    ++ ++   G N    +KS +VE GQ++ +        S +  +++PLDI+FED+ +I I+K A MVVHPA G+W+GT VNAL Y+LA ++   S              RPG+VHRLDKGTTGVL+ AK     A L+  FA R++KK+Y+A+ VGNPG+  VID PIGRHP HRQRM  VP   Q N   RRALS V T AFDGKLS+V+V IETGRTHQIRVH+Q R TP+ GD++YG  DWN++L ++  + RPLLHA  LE  HP TG+ +   A L DD+  +   IYP  + E P+   G  +
Sbjct:    1 KRIDAVLAALEPEMSRSFCGNLVANKRVSIIQENGDNCLVDRKSFKVEPGQQLIISLPREEGASEIIAQDLPLDIIFEDEHMIVINKAANMVVHPAAGNWDGTVVNALAYYLANRSESIS-------------FRPGIVHRLDKGTTGVLVVAKTSQTLATLSNFFAARQVKKTYMAITVGNPGKHVVIDKPIGRHPLHRQRMRVVPDPHQKNSTGRRALSYVDTLAFDGKLSLVQVRIETGRTHQIRVHLQDRHTPIYGDDIYGLADWNKKLSKTHRIVRPLLHAYKLEINHPVTGEPMVFKASLADDMKRITTTIYPDSEKEIPDLFHGNTI 321          
BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A4D9DAN8_9STRA (PseudoU_synth_2 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAN8_9STRA)

HSP 1 Score: 301 bits (770), Expect = 8.210e-93
Identity = 176/393 (44.78%), Postives = 230/393 (58.52%), Query Frame = 0
Query:  136 DDLDFTVEVLTVGS-GEGGKRLDAFLATRMPEQSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPE--LSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPG-EAAVIDVPIGRHPRHRQRMVAVPTIQPN--------------------------------------------------IQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRIYPQVDD-EHPEW 473
            D+ + T + + V +  E   R+D FL  R+   SRS    L   G V V G  ++KS+++ EG E+ V    + E    +E E+IPLD+L+ED+ +IA++K  GMVVHPAPG+ NGTFVNAL+ H+A++  E    V  +        RPGVVHRLDKGT+GVLLAAK     A L++ FAER + K+YLA+ +GNP  + AVIDVPIGRHPR RQRM      + +                                                  +  R+A S V T AFDG+LSVVEVGIETGRTHQIRVH+QHRR PVLGDE+YGN  WN R ++  G+TRP+LHA  L  +HP TGD + LVAP+P D+ +V   I+PQV   E+ EW
Sbjct:   76 DEANITAQFIFVANTSESLIRVDRFLTQRLKGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVLQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGEIEEVVGSEG-------RPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASNAQDAVLNYDGYSEDYQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDMLSVAHGIWPQVKGRENEEW 461          
BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A7X5TFN1_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A7X5TFN1_9BACT)

HSP 1 Score: 290 bits (741), Expect = 3.790e-91
Identity = 153/321 (47.66%), Postives = 211/321 (65.73%), Query Frame = 0
Query:  143 EVLTVGSGEGGKRLDAFLATRMPE-QSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRI 462
            E + +   E G+RLD  LA R  E +SR+YF  L +   VL+ G   KK V+ + G EVE+ FV++PE+ +  E IPLD+L+ED+DI+ ++KP+GMVVHPAPG+W+GTFVNAL+YH  Q            D +H   LRPG+VHRLDK T+GVL++AK    Q +L  +FA RE+ K YLA+C+G+PGE   I++PIGRHP+ RQRM  + +       R A ++  T A DG LS+V++ + TGRTHQIRVHMQH  TPVLGD  YGN   N++ +    +TR LLHA+ + F HP T   +  VA +P D+A  ++R+
Sbjct:    7 ETIIITEDEAGQRLDKILANRFKEVRSRTYFQSLIRDHNVLLNGSPIKKQVKPQVGDEVEILFVLTPEIDVTPEPIPLDVLYEDEDILVVNKPSGMVVHPAPGNWSGTFVNALLYHCKQLP---------SDSQH---LRPGIVHRLDKETSGVLVSAKTSQAQQRLVEMFASREVYKEYLAICLGDPGEGE-INLPIGRHPKQRQRMTVLDS-----GGRNARTIFRTLASDGTLSLVDIILATGRTHQIRVHMQHHGTPVLGDSTYGNIQANKKFK----VTRQLLHARKIRFTHPITKREMEFVAEIPSDMATFIQRL 305          
BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A212KRQ0_9CHLA (Pseudouridine synthase n=1 Tax=Chlamydiales bacterium SCGC AG-110-P3 TaxID=1871323 RepID=A0A212KRQ0_9CHLA)

HSP 1 Score: 288 bits (738), Expect = 1.850e-90
Identity = 155/322 (48.14%), Postives = 210/322 (65.22%), Query Frame = 0
Query:  142 VEVLTVGSGEGGKRLDAFLATRMP-EQSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRI 462
            +    V   E G RLD  L+ R   +QSRSYF  L +  +VL+ G+  KK V+ E G EVEV F ++PE++L  EN+PL++L+EDD +I I+K AGMVVHPAPG+W GTFVNAL+YH     +  +            SLRPG+VHRLDK T+G L+AAKN  +Q +L  LF+ R+I K Y+AVCVGNPG+  V DVPIGRHP HR++M  + +       R A++  ST A   +LSVV++ +ETGRTHQIRVH++HR  P+LGD VYG +  NR+   S    R +LHA  L F HP TG+ + ++AP+P D+   + R+
Sbjct:   21 INTFVVSDSEAGSRLDKLLSQRYQGQQSRSYFQKLIRNELVLLNGRPVKKQVRPESGDEVEVEFALTPEVNLHPENLPLEVLYEDDHLIIINKSAGMVVHPAPGNWTGTFVNALLYHCGDSFQAEA------------SLRPGIVHRLDKNTSGCLVAAKNLHVQQRLVELFSLRKIYKEYIAVCVGNPGDGTV-DVPIGRHPVHRKQMAVIES-----GGRHAVTHYSTLAHKDRLSVVKLVLETGRTHQIRVHLRHRGMPILGDCVYGTEAMNRQYSAS----RQMLHAYRLRFMHPITGEKLDVMAPIPVDMRLQIARV 320          
BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A7V9UFC7_9BACT (Pseudouridine synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7V9UFC7_9BACT)

HSP 1 Score: 286 bits (732), Expect = 1.130e-89
Identity = 153/321 (47.66%), Postives = 209/321 (65.11%), Query Frame = 0
Query:  142 VEVLTVGSGEGGKRLDAFLATRMPE-QSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRR 461
            ++ + +   E G+RLD  LA R  E +SR+YF  L +   VLV G+  KK  + E G EVEV F+++PE++L+ ENIPLDI++EDD II I+KPAGMVVHPA G+W GTFVNAL+YH  Q+  + S     +      +LRPG+VHRLDK TTG+LLAAK    Q KL  LF+ R+I K Y A+CVG PG+   ID PIGRHP  R+ M  +P        ++A+S+  T  ++ +LS V + + TGRTHQIRVH++H  TPVLGD +YG++    R   +  + R +LHA  L+FEHP TG L+   APLP ++  ++ R
Sbjct:    5 IDCIIISETEAGQRLDKILADRFKELKSRTYFQYLIEEQKVLVNGEQVKKRFKPEFGDEVEVHFILTPEITLQAENIPLDIIYEDDSIILINKPAGMVVHPAAGNWTGTFVNALLYHC-QEIEKLS-----RSANSTGNLRPGIVHRLDKETTGLLLAAKTEEAQRKLVELFSNRKIIKEYRAICVGKPGDIT-IDQPIGRHPVQRKMMTVLPH-----GGKKAISICKTLNYNSELSFVNIVLVTGRTHQIRVHLKHLNTPVLGDIIYGSE----RANSTFNVNRQMLHAHYLQFEHPTTGKLLEFYAPLPQEMEQILVR 309          
BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A7W1U2J2_9BACT (Pseudouridine synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1U2J2_9BACT)

HSP 1 Score: 285 bits (730), Expect = 1.480e-89
Identity = 160/321 (49.84%), Postives = 206/321 (64.17%), Query Frame = 0
Query:  143 EVLTVGSGEGGKRLDAFLATRMPE-QSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRI 462
            E+L V   E G+RLD  LA R    +SR+YF  L + G VL+ G ++KK ++   G E++V FV++PE+ L  E IPLDI+FED+ IIAI+KP GMVVHPA G+W GTFVNAL+YH  Q        + L   E  P LRPG+VHRLDK T+G+LLAAK P    +L  +F+ER+I K YLAVC+GNPG    I  PIGRHP HR+ M  V T +P I   +AL V        K+S+V V +ETGRTHQIRVH +HR TP+LGD VYG++  NR      G+ R LLHA  L+F HP     + L AP+P D+ A   ++
Sbjct:    5 ELLVVQDEEAGERLDKILARRFDGIKSRTYFQMLIEEGHVLLNGLSAKKRIKPTAGDEIQVNFVLTPEIGLSPEAIPLDIIFEDEHIIAINKPVGMVVHPAVGNWTGTFVNALLYHCQQ--------LGLSLPESSP-LRPGIVHRLDKDTSGLLLAAKTPLAHQRLVAMFSERKIHKEYLAVCLGNPGNLT-ISAPIGRHPVHRKLMSVVETGKPAISHLKALEVKE------KISLVRVILETGRTHQIRVHFKHRGTPILGDAVYGSESANREY----GIHRQLLHAHRLQFMHPIHNTPVELTAPIPSDLKAFFPKV 305          
BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A2E3M0J3_9BACT (Pseudouridine synthase n=1 Tax=Waddliaceae bacterium TaxID=2026802 RepID=A0A2E3M0J3_9BACT)

HSP 1 Score: 285 bits (728), Expect = 2.860e-89
Identity = 153/313 (48.88%), Postives = 205/313 (65.50%), Query Frame = 0
Query:  151 EGGKRLDAFLATRMPEQSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRIY 463
            E G+RLD  L+ R  EQSR+YF  L    +VLV G+  +K   ++   EVEV F++SPELSLE E+IPLDI++ED+ ++AI+KPAG+VVHP  G+W+GTF NAL+YH  Q         D  D      LRPG+VHRLDK T+G+LLAAK    Q  L  LF+ R+I K Y A+C+GNPG    I+ PIGRHP HR++M  + +       R A ++  T AF+GKLS+V++ +ETGRTHQIRVHM H  TP+LGDE YG K  N++ +    + R LLHA+ LE EHP T   + L A LP+D + +  +I+
Sbjct:   15 EAGERLDKVLSKRYTEQSRTYFQYLITEKLVLVNGEPVRKRTALQTNDEVEVEFILSPELSLEPEDIPLDIVYEDEYLLAINKPAGLVVHPGAGNWSGTFANALLYHCKQVP-------DAGD-----QLRPGIVHRLDKDTSGLLLAAKTNMSQQALVELFSSRKIYKEYWAICLGNPGNGR-IEAPIGRHPIHRKKMAVIES------GRSASTIYETIAFNGKLSLVKLILETGRTHQIRVHMLHLGTPILGDETYGRKQMNQKYK----INRQLLHAKHLELEHPITKKNLKLEASLPEDFSKITEQIH 304          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFM8_ECTSI1.360e-20265.16Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836CH15_9STRA1.890e-13258.69Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S3XXK7_HETAK1.820e-12153.58Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
B7GAM3_PHATC2.850e-9548.50Pseudouridine synthase (Fragment) n=1 Tax=Phaeodac... [more]
A0A4D9DAN8_9STRA8.210e-9344.78PseudoU_synth_2 domain-containing protein n=2 Tax=... [more]
A0A7X5TFN1_9BACT3.790e-9147.66Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]
A0A212KRQ0_9CHLA1.850e-9048.14Pseudouridine synthase n=1 Tax=Chlamydiales bacter... [more]
A0A7V9UFC7_9BACT1.130e-8947.66Pseudouridine synthase n=1 Tax=Parachlamydiaceae b... [more]
A0A7W1U2J2_9BACT1.480e-8949.84Pseudouridine synthase n=1 Tax=Parachlamydiaceae b... [more]
A0A2E3M0J3_9BACT2.860e-8948.88Pseudouridine synthase n=1 Tax=Waddliaceae bacteri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 227..398
e-value: 5.6E-29
score: 101.3
NoneNo IPR availableGENE3D3.30.2350.10coord: 220..464
e-value: 6.2E-65
score: 220.8
NoneNo IPR availablePANTHERPTHR21600:SF34RNA PSEUDOURIDINE SYNTHASE 2, CHLOROPLASTICcoord: 142..459
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 142..459
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..508
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.475
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 154..238
IPR006225Pseudouridine synthase, RluC/RluDTIGRFAMTIGR00005TIGR00005coord: 152..459
e-value: 2.0E-73
score: 245.3
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 143..207
e-value: 2.7E-11
score: 44.8
IPR006224Pseudouridine synthase, RluC/RluD, conserved sitePROSITEPS01129PSI_RLUcoord: 285..299
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 154..226
score: 11.141
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 215..462

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5729contigH-paniculata_contig5729:3713..11152 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5729.13285.1mRNA_H-paniculata_contig5729.13285.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5729 3682..11818 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5729.13285.1 ID=prot_H-paniculata_contig5729.13285.1|Name=mRNA_H-paniculata_contig5729.13285.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=509bp
MFRKCLNFLLLAMGLNRQANLSKRKPAYYFGLHSNSVCRYRIERVTGRMV
LLSARRQQPRPLHSHNVVRKAVLFLGCLLSGRLVLVNGFFVRAPAVGPSF
PTCHHGRCSFAGIGQMRCSASAPVAAAEALEIDEADDLDFTVEVLTVGSG
EGGKRLDAFLATRMPEQSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEV
EVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTF
VNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAK
NPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMV
AVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRR
TPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAP
LPDDIAAVVRRIYPQVDDEHPEWLEGGAVPGKEKEEENDEDKSSPGYVPK
DLRDYSLH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR006225PsdUridine_synth_RluC/D
IPR036986S4_RNA-bd_sf
IPR006224PsdUridine_synth_RluC/D_CS
IPR002942S4_RNA-bd
IPR020103PsdUridine_synth_cat_dom_sf