mRNA_H-paniculata_contig5729.13285.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5729.13285.1
Unique NamemRNA_H-paniculata_contig5729.13285.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: D8LFM8_ECTSI (Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFM8_ECTSI)

HSP 1 Score: 580 bits (1495), Expect = 6.980e-199
Identity = 318/488 (65.16%), Postives = 366/488 (75.00%), Query Frame = 2 
Query:  212 PLHSHNVVRKAVLFLGCLLSGRLVLVNGFFVRAPAVGPSFP----TCHHGRCSFAG--------------IGQMRCSA-SAPVAAAE--ALEIDEADDLDFTVEVLTVGSGEGGKRLDAFLATRMPEQSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPP-------VDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRIYPQVDDEHPEWLEGGAVPGKEKEEEN-------DEDKSSPGY------VPKDLRDYSL 1552
            PL     V +AVLFL  LL G   LV+GFFV    V  S P       HG   F                +GQ RC+A SA +AAA   A E +  +++ F  E+LTV  GEGGKRLD+FL  RMPEQSRSYFGGLCQLGMVLVGGK +KKSV+VEEGQEVEVRF++SPELSL+GE+IPLDIL+EDD+IIA+SKPAGMVVHPAPGSWNGTFVNALV+HL +   + +           + DGEH PSLRPG+VHRLDKGTTGVLLAAKNPTMQAKLA LFA+R I KSYLAVCVGNPG+AA IDVPIGRHPR RQRMVAVPTIQPNI+SRRALSVV+T AFDGKLSV EV IETGRTHQIRVH+QHRRTPVLGDEVYGN DWNRRL+QSTG+TRPLLHA+SLEF+HP TG+++SL APLP D+ AVVRRIYPQV+DEHPEWL+     G ++   +       DED  S         VP++LR+Y +
Sbjct:    7 PLLLPTAVYRAVLFLW-LLEG---LVSGFFVGTLRV--SLPRAKHVAQHGSADFGQRGGAAAPAVSMPVLVGQRRCNAGSAALAAARDVAPEEEVEEEIAFNTEMLTVEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKTAKKSVKVEEGQEVEVRFIISPELSLQGEDIPLDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNGLGVAEAAFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAVPTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWNRRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRIYPQVEDEHPEWLQDTTATGDDERNSSSVEGGSADEDTDSSAAARSDVDVPEELREYRI 488
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BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA)

HSP 1 Score: 399 bits (1025), Expect = 2.550e-129
Identity = 206/351 (58.69%), Postives = 262/351 (74.64%), Query Frame = 2 
Query:  428 DEADDLDFTVEVLTVGSGEGGKRLDAFLATRMPEQSRSYFGGLCQLGMVLVGGKNS-KKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRIYPQVDDEHPEWL-EGGAVPG 1474
            D  +D  F V V      + G+R+DAFL +++P+QSR+YFG LC  G V V G ++ KKS +V  GQ + VRF+ + EL+L  E+IPLD++FED +++AI+KP GMVVHPAPG+WNGTFVNAL++HL++     S       GE    LRPGVVHRLDKGT+GVLLAAK P MQ +L+ LF +R+++K+YLAVC GNPG+ A IDVPIGRH  +RQ+MVAVP IQP  ++RRALS V   AFDG LSV EV IETGRTHQIRVH+QHRRTP++GDE+YGN+DWNRRLQ+  G++RPLLHA  LEF HP TG  + L APLP+D+A++VR +YP   +EHP W  EGG   G
Sbjct:   44 DADEDEIFDVSVFEADLADAGQRIDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSAVKKSHKVTAGQIISVRFLATAELNLGPEDIPLDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSKDGSVVSL------GES-GDLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAVCAGNPGDDA-IDVPIGRHATNRQKMVAVPDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRLQKR-GISRPLLHALRLEFTHPTTGAALRLEAPLPEDMASIVRGVYPVAIEEHPGWFGEGGEAGG 385
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BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK)

HSP 1 Score: 371 bits (952), Expect = 1.930e-118
Identity = 187/349 (53.58%), Postives = 248/349 (71.06%), Query Frame = 2 
Query:  410 AEALEIDEADDLDFTVEVLTVGSGEGGKRLDAFLATRMPEQSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNI-QSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRIYPQVDDEHPEWL 1453
            A +  +D  DD D   E + VG     KRLDAFL+   PEQSRSYFG LCQ G+V VGG+  KKS ++  GQEV V F+ + E++ E E+IPLDIL+ED+ +IA++KP GMVVHPAPGSW+GTF NAL +H+  +  ++      +      +LRPG+VHRLDKGT+GVLLA+KN    AKL+ +FA R+IKK+YLAVCVGNPG+   I+  I RHP++RQ+M  +   Q    ++R A+++V   +FD +LS+  V IETGRTHQIRVH+ HRRTPVLGDE+YGN D NRR  +  G+ RPLLHA  LE +HP TG+ +SL AP+P+D+  V+ +IYPQV+DE P+ L
Sbjct:   51 ASSATLDRTDDDDLQEETVIVGEEYNKKRLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRAVKKSEKLRAGQEVSVAFLPTAEMAAEPEDIPLDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRGEDY------RAAGGGDALRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQNRRAVKRFGLQRPLLHAYQLELDHPITGEPLSLKAPVPEDMVRVLAKIYPQVEDEQPDML 393
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BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: B7GAM3_PHATC (Pseudouridine synthase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAM3_PHATC)

HSP 1 Score: 301 bits (770), Expect = 1.370e-92
Identity = 162/334 (48.50%), Postives = 213/334 (63.77%), Query Frame = 2 
Query:  491 KRLDAFLATRMPEQSRSYFGGLC---QLGMVLVGGKN---SKKSVQVEEGQEVEVRFVVSPELS-LEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTI-QPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRIYPQVDDEHPEWLEGGAV 1468
            KR+DA LA   PE SRS+ G L    ++ ++   G N    +KS +VE GQ++ +        S +  +++PLDI+FED+ +I I+K A MVVHPA G+W+GT VNAL Y+LA ++   S              RPG+VHRLDKGTTGVL+ AK     A L+  FA R++KK+Y+A+ VGNPG+  VID PIGRHP HRQRM  VP   Q N   RRALS V T AFDGKLS+V+V IETGRTHQIRVH+Q R TP+ GD++YG  DWN++L ++  + RPLLHA  LE  HP TG+ +   A L DD+  +   IYP  + E P+   G  +
Sbjct:    1 KRIDAVLAALEPEMSRSFCGNLVANKRVSIIQENGDNCLVDRKSFKVEPGQQLIISLPREEGASEIIAQDLPLDIIFEDEHMIVINKAANMVVHPAAGNWDGTVVNALAYYLANRSESIS-------------FRPGIVHRLDKGTTGVLVVAKTSQTLATLSNFFAARQVKKTYMAITVGNPGKHVVIDKPIGRHPLHRQRMRVVPDPHQKNSTGRRALSYVDTLAFDGKLSLVQVRIETGRTHQIRVHLQDRHTPIYGDDIYGLADWNKKLSKTHRIVRPLLHAYKLEINHPVTGEPMVFKASLADDMKRITTTIYPDSEKEIPDLFHGNTI 321
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BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A4D9DAN8_9STRA (PseudoU_synth_2 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAN8_9STRA)

HSP 1 Score: 301 bits (770), Expect = 3.940e-90
Identity = 176/393 (44.78%), Postives = 230/393 (58.52%), Query Frame = 2 
Query:  437 DDLDFTVEVLTVGS-GEGGKRLDAFLATRMPEQSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPE--LSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPG-EAAVIDVPIGRHPRHRQRMVAVPTIQPN--------------------------------------------------IQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRIYPQVDD-EHPEW 1450
            D+ + T + + V +  E   R+D FL  R+   SRS    L   G V V G  ++KS+++ EG E+ V    + E    +E E+IPLD+L+ED+ +IA++K  GMVVHPAPG+ NGTFVNAL+ H+A++  E    V  +        RPGVVHRLDKGT+GVLLAAK     A L++ FAER + K+YLA+ +GNP  + AVIDVPIGRHPR RQRM      + +                                                  +  R+A S V T AFDG+LSVVEVGIETGRTHQIRVH+QHRR PVLGDE+YGN  WN R ++  G+TRP+LHA  L  +HP TGD + LVAP+P D+ +V   I+PQV   E+ EW
Sbjct:   76 DEANITAQFIFVANTSESLIRVDRFLTQRLKGHSRSSVCDLLDRGFVYVNGSPARKSLKIVEGDEIFVLQCATNERLAEVEEEDIPLDVLYEDEHVIAVNKAPGMVVHPAPGNRNGTFVNALLAHVARRGGEIEEVVGSEG-------RPGVVHRLDKGTSGVLLAAKTARAHAALSSAFAERRVNKTYLAISIGNPSSQGAVIDVPIGRHPRDRQRMAVAMQARTSHTSSFPGASNAQDAVLNYDGYSEDYQEIGYNSTEGEELLMGRGGNSGNTPLTGRKARSTVKTLAFDGRLSVVEVGIETGRTHQIRVHLQHRRNPVLGDELYGNAQWNARARRRWGVTRPMLHALRLVVDHPVTGDPLRLVAPVPPDMLSVAHGIWPQVKGRENEEW 461
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BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A7X5TFN1_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A7X5TFN1_9BACT)

HSP 1 Score: 290 bits (741), Expect = 1.550e-88
Identity = 153/321 (47.66%), Postives = 211/321 (65.73%), Query Frame = 2 
Query:  458 EVLTVGSGEGGKRLDAFLATRMPE-QSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRI 1417
            E + +   E G+RLD  LA R  E +SR+YF  L +   VL+ G   KK V+ + G EVE+ FV++PE+ +  E IPLD+L+ED+DI+ ++KP+GMVVHPAPG+W+GTFVNAL+YH  Q            D +H   LRPG+VHRLDK T+GVL++AK    Q +L  +FA RE+ K YLA+C+G+PGE   I++PIGRHP+ RQRM  + +       R A ++  T A DG LS+V++ + TGRTHQIRVHMQH  TPVLGD  YGN   N++ +    +TR LLHA+ + F HP T   +  VA +P D+A  ++R+
Sbjct:    7 ETIIITEDEAGQRLDKILANRFKEVRSRTYFQSLIRDHNVLLNGSPIKKQVKPQVGDEVEILFVLTPEIDVTPEPIPLDVLYEDEDILVVNKPSGMVVHPAPGNWSGTFVNALLYHCKQLP---------SDSQH---LRPGIVHRLDKETSGVLVSAKTSQAQQRLVEMFASREVYKEYLAICLGDPGEGE-INLPIGRHPKQRQRMTVLDS-----GGRNARTIFRTLASDGTLSLVDIILATGRTHQIRVHMQHHGTPVLGDSTYGNIQANKKFK----VTRQLLHARKIRFTHPITKREMEFVAEIPSDMATFIQRL 305
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BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A212KRQ0_9CHLA (Pseudouridine synthase n=1 Tax=Chlamydiales bacterium SCGC AG-110-P3 TaxID=1871323 RepID=A0A212KRQ0_9CHLA)

HSP 1 Score: 288 bits (738), Expect = 7.440e-88
Identity = 155/322 (48.14%), Postives = 210/322 (65.22%), Query Frame = 2 
Query:  455 VEVLTVGSGEGGKRLDAFLATRMP-EQSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRI 1417
            +    V   E G RLD  L+ R   +QSRSYF  L +  +VL+ G+  KK V+ E G EVEV F ++PE++L  EN+PL++L+EDD +I I+K AGMVVHPAPG+W GTFVNAL+YH     +  +            SLRPG+VHRLDK T+G L+AAKN  +Q +L  LF+ R+I K Y+AVCVGNPG+  V DVPIGRHP HR++M  + +       R A++  ST A   +LSVV++ +ETGRTHQIRVH++HR  P+LGD VYG +  NR+   S    R +LHA  L F HP TG+ + ++AP+P D+   + R+
Sbjct:   21 INTFVVSDSEAGSRLDKLLSQRYQGQQSRSYFQKLIRNELVLLNGRPVKKQVRPESGDEVEVEFALTPEVNLHPENLPLEVLYEDDHLIIINKSAGMVVHPAPGNWTGTFVNALLYHCGDSFQAEA------------SLRPGIVHRLDKNTSGCLVAAKNLHVQQRLVELFSLRKIYKEYIAVCVGNPGDGTV-DVPIGRHPVHRKQMAVIES-----GGRHAVTHYSTLAHKDRLSVVKLVLETGRTHQIRVHLRHRGMPILGDCVYGTEAMNRQYSAS----RQMLHAYRLRFMHPITGEKLDVMAPIPVDMRLQIARV 320
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BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A7V9UFC7_9BACT (Pseudouridine synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7V9UFC7_9BACT)

HSP 1 Score: 286 bits (732), Expect = 4.400e-87
Identity = 153/321 (47.66%), Postives = 209/321 (65.11%), Query Frame = 2 
Query:  455 VEVLTVGSGEGGKRLDAFLATRMPE-QSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRR 1414
            ++ + +   E G+RLD  LA R  E +SR+YF  L +   VLV G+  KK  + E G EVEV F+++PE++L+ ENIPLDI++EDD II I+KPAGMVVHPA G+W GTFVNAL+YH  Q+  + S     +      +LRPG+VHRLDK TTG+LLAAK    Q KL  LF+ R+I K Y A+CVG PG+   ID PIGRHP  R+ M  +P        ++A+S+  T  ++ +LS V + + TGRTHQIRVH++H  TPVLGD +YG++    R   +  + R +LHA  L+FEHP TG L+   APLP ++  ++ R
Sbjct:    5 IDCIIISETEAGQRLDKILADRFKELKSRTYFQYLIEEQKVLVNGEQVKKRFKPEFGDEVEVHFILTPEITLQAENIPLDIIYEDDSIILINKPAGMVVHPAAGNWTGTFVNALLYHC-QEIEKLS-----RSANSTGNLRPGIVHRLDKETTGLLLAAKTEEAQRKLVELFSNRKIIKEYRAICVGKPGDIT-IDQPIGRHPVQRKMMTVLPH-----GGKKAISICKTLNYNSELSFVNIVLVTGRTHQIRVHLKHLNTPVLGDIIYGSE----RANSTFNVNRQMLHAHYLQFEHPTTGKLLEFYAPLPQEMEQILVR 309
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BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A7W1U2J2_9BACT (Pseudouridine synthase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1U2J2_9BACT)

HSP 1 Score: 285 bits (730), Expect = 5.680e-87
Identity = 160/321 (49.84%), Postives = 206/321 (64.17%), Query Frame = 2 
Query:  458 EVLTVGSGEGGKRLDAFLATRMPE-QSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRI 1417
            E+L V   E G+RLD  LA R    +SR+YF  L + G VL+ G ++KK ++   G E++V FV++PE+ L  E IPLDI+FED+ IIAI+KP GMVVHPA G+W GTFVNAL+YH  Q        + L   E  P LRPG+VHRLDK T+G+LLAAK P    +L  +F+ER+I K YLAVC+GNPG    I  PIGRHP HR+ M  V T +P I   +AL V        K+S+V V +ETGRTHQIRVH +HR TP+LGD VYG++  NR      G+ R LLHA  L+F HP     + L AP+P D+ A   ++
Sbjct:    5 ELLVVQDEEAGERLDKILARRFDGIKSRTYFQMLIEEGHVLLNGLSAKKRIKPTAGDEIQVNFVLTPEIGLSPEAIPLDIIFEDEHIIAINKPVGMVVHPAVGNWTGTFVNALLYHCQQ--------LGLSLPESSP-LRPGIVHRLDKDTSGLLLAAKTPLAHQRLVAMFSERKIHKEYLAVCLGNPGNLT-ISAPIGRHPVHRKLMSVVETGKPAISHLKALEVKE------KISLVRVILETGRTHQIRVHFKHRGTPILGDAVYGSESANREY----GIHRQLLHAHRLQFMHPIHNTPVELTAPIPSDLKAFFPKV 305
[Close]
BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Match: A0A2E3M0J3_9BACT (Pseudouridine synthase n=1 Tax=Waddliaceae bacterium TaxID=2026802 RepID=A0A2E3M0J3_9BACT)

HSP 1 Score: 285 bits (728), Expect = 1.080e-86
Identity = 153/313 (48.88%), Postives = 205/313 (65.50%), Query Frame = 2 
Query:  482 EGGKRLDAFLATRMPEQSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEVEVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTFVNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAKNPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMVAVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRRTPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAPLPDDIAAVVRRIY 1420
            E G+RLD  L+ R  EQSR+YF  L    +VLV G+  +K   ++   EVEV F++SPELSLE E+IPLDI++ED+ ++AI+KPAG+VVHP  G+W+GTF NAL+YH  Q         D  D      LRPG+VHRLDK T+G+LLAAK    Q  L  LF+ R+I K Y A+C+GNPG    I+ PIGRHP HR++M  + +       R A ++  T AF+GKLS+V++ +ETGRTHQIRVHM H  TP+LGDE YG K  N++ +    + R LLHA+ LE EHP T   + L A LP+D + +  +I+
Sbjct:   15 EAGERLDKVLSKRYTEQSRTYFQYLITEKLVLVNGEPVRKRTALQTNDEVEVEFILSPELSLEPEDIPLDIVYEDEYLLAINKPAGLVVHPGAGNWSGTFANALLYHCKQVP-------DAGD-----QLRPGIVHRLDKDTSGLLLAAKTNMSQQALVELFSSRKIYKEYWAICLGNPGNGR-IEAPIGRHPIHRKKMAVIES------GRSASTIYETIAFNGKLSLVKLILETGRTHQIRVHMLHLGTPILGDETYGRKQMNQKYK----INRQLLHAKHLELEHPITKKNLKLEASLPEDFSKITEQIH 304
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5729.13285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFM8_ECTSI6.980e-19965.16Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836CH15_9STRA2.550e-12958.69Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S3XXK7_HETAK1.930e-11853.58Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
B7GAM3_PHATC1.370e-9248.50Pseudouridine synthase (Fragment) n=1 Tax=Phaeodac... [more]
A0A4D9DAN8_9STRA3.940e-9044.78PseudoU_synth_2 domain-containing protein n=2 Tax=... [more]
A0A7X5TFN1_9BACT1.550e-8847.66Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]
A0A212KRQ0_9CHLA7.440e-8848.14Pseudouridine synthase n=1 Tax=Chlamydiales bacter... [more]
A0A7V9UFC7_9BACT4.400e-8747.66Pseudouridine synthase n=1 Tax=Parachlamydiaceae b... [more]
A0A7W1U2J2_9BACT5.680e-8749.84Pseudouridine synthase n=1 Tax=Parachlamydiaceae b... [more]
A0A2E3M0J3_9BACT1.080e-8648.88Pseudouridine synthase n=1 Tax=Waddliaceae bacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5729contigH-paniculata_contig5729:3682..11818 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score585.9
Seed ortholog evalue1.8e-164
Seed eggNOG ortholog2880.D8LFM8
KEGG koko:K06180
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.pseudouridine synthase activity
EggNOG OGsCOG0564@1,KOG1919@2759
Ec32 ortholog descriptionPseudouridine synthase, RluD
Ec32 orthologEc-04_001540.1
EC5.4.99.23
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Exons6
Model size2224
Cds size1527
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5729.13285.1prot_H-paniculata_contig5729.13285.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5729 3713..11152 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930616.3631198-UTR-H-paniculata_contig5729:3681..37121622930616.3631198-UTR-H-paniculata_contig5729:3681..3712Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5729 3682..3712 +
1691481373.8591995-UTR-H-paniculata_contig5729:3681..37121691481373.8591995-UTR-H-paniculata_contig5729:3681..3712Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5729 3682..3712 +
1622930616.4915984-UTR-H-paniculata_contig5729:11152..118181622930616.4915984-UTR-H-paniculata_contig5729:11152..11818Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5729 11153..11818 +
1691481373.9336512-UTR-H-paniculata_contig5729:11152..118181691481373.9336512-UTR-H-paniculata_contig5729:11152..11818Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5729 11153..11818 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930616.3858957-CDS-H-paniculata_contig5729:3712..41141622930616.3858957-CDS-H-paniculata_contig5729:3712..4114Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5729 3713..4114 +
1691481373.8711605-CDS-H-paniculata_contig5729:3712..41141691481373.8711605-CDS-H-paniculata_contig5729:3712..4114Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5729 3713..4114 +
1622930616.4199271-CDS-H-paniculata_contig5729:5685..59431622930616.4199271-CDS-H-paniculata_contig5729:5685..5943Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5729 5686..5943 +
1691481373.8799381-CDS-H-paniculata_contig5729:5685..59431691481373.8799381-CDS-H-paniculata_contig5729:5685..5943Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5729 5686..5943 +
1622930616.4354467-CDS-H-paniculata_contig5729:7104..73921622930616.4354467-CDS-H-paniculata_contig5729:7104..7392Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5729 7105..7392 +
1691481373.8908508-CDS-H-paniculata_contig5729:7104..73921691481373.8908508-CDS-H-paniculata_contig5729:7104..7392Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5729 7105..7392 +
1622930616.449045-CDS-H-paniculata_contig5729:8061..83041622930616.449045-CDS-H-paniculata_contig5729:8061..8304Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5729 8062..8304 +
1691481373.8997197-CDS-H-paniculata_contig5729:8061..83041691481373.8997197-CDS-H-paniculata_contig5729:8061..8304Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5729 8062..8304 +
1622930616.4661877-CDS-H-paniculata_contig5729:9882..100861622930616.4661877-CDS-H-paniculata_contig5729:9882..10086Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5729 9883..10086 +
1691481373.908736-CDS-H-paniculata_contig5729:9882..100861691481373.908736-CDS-H-paniculata_contig5729:9882..10086Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5729 9883..10086 +
1622930616.4792068-CDS-H-paniculata_contig5729:11020..111521622930616.4792068-CDS-H-paniculata_contig5729:11020..11152Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5729 11021..11152 +
1691481373.9194179-CDS-H-paniculata_contig5729:11020..111521691481373.9194179-CDS-H-paniculata_contig5729:11020..11152Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5729 11021..11152 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5729.13285.1

>prot_H-paniculata_contig5729.13285.1 ID=prot_H-paniculata_contig5729.13285.1|Name=mRNA_H-paniculata_contig5729.13285.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=509bp
MFRKCLNFLLLAMGLNRQANLSKRKPAYYFGLHSNSVCRYRIERVTGRMV
LLSARRQQPRPLHSHNVVRKAVLFLGCLLSGRLVLVNGFFVRAPAVGPSF
PTCHHGRCSFAGIGQMRCSASAPVAAAEALEIDEADDLDFTVEVLTVGSG
EGGKRLDAFLATRMPEQSRSYFGGLCQLGMVLVGGKNSKKSVQVEEGQEV
EVRFVVSPELSLEGENIPLDILFEDDDIIAISKPAGMVVHPAPGSWNGTF
VNALVYHLAQQNREFSPPVDLKDGEHYPSLRPGVVHRLDKGTTGVLLAAK
NPTMQAKLATLFAEREIKKSYLAVCVGNPGEAAVIDVPIGRHPRHRQRMV
AVPTIQPNIQSRRALSVVSTAAFDGKLSVVEVGIETGRTHQIRVHMQHRR
TPVLGDEVYGNKDWNRRLQQSTGMTRPLLHAQSLEFEHPKTGDLISLVAP
LPDDIAAVVRRIYPQVDDEHPEWLEGGAVPGKEKEEENDEDKSSPGYVPK
DLRDYSLH*
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mRNA from alignment at H-paniculata_contig5729:3682..11818+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5729.13285.1 ID=mRNA_H-paniculata_contig5729.13285.1|Name=mRNA_H-paniculata_contig5729.13285.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8137bp|location=Sequence derived from alignment at H-paniculata_contig5729:3682..11818+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CATCGTGTTACCTACCTAGAGAGGATTCTTGATGTTCAGAAAATGTTTGA
ACTTTCTCCTTTTGGCTATGGGTCTGAATAGACAGGCTAATTTGTCAAAG
AGAAAACCAGCATATTATTTCGGACTGCACTCAAATTCGGTCTGTAGATA
TCGCATCGAAAGAGTTACGGGGAGGATGGTGCTTCTATCAGCGCGCCGAC
AACAACCACGCCCGTTACATTCTCATAATGTGGTTCGAAAAGCTGTTTTA
TTCTTAGGGTGCCTTTTGAGCGGTAGGCTCGTGCTTGTAAATGGATTTTT
CGTTCGTGCTCCTGCCGTAGGACCTTCATTTCCCACTTGCCATCATGGGC
GATGCAGCTTCGCGGGAATAGGGCAGATGCGATGTAGTGCGTCGGCGCCT
GTGGCAGCAGCAGAAGCCTTGGAGATAGACGAGGTGACAGCGGTGATACC
TTATGTTTTGCGAGGGGGGGATTGGTGATATTTTGTTTTGGTGCTTCGAC
ATATGTTCTGTGCAGCTACCAACTGTTATTCATCGTAACACATGATCTTG
TATTACGCTTAAACTACAACTCAATGTTCACGTGACATGTGTCGTGGTGA
GTGTGCGGACTGTAGTGCCCCAACGAGTGCCCGGTATTTGTACCCATCTC
GTTAATACAAACAGATGAAACCGCACTTCTTTGGCATAACGACATCTGGT
TGGGTGGGGGCAATAGAGAACTGCAAGGTCATGACAGCTGAACTCGCTTG
TTTGCAGTCCGAAGACAGCCCAGCACTAAACAGTTCTCATGTGTTTGCGC
TCGTACTCGGAGTTGAATTGAGGGCAACAGATCGCAAGGGGGGGAACACT
ACCGGAAGAGAGACATCTAGTAGTAGTCAAGCTTCATATCCATACCCAAG
CCTGGAATCCGAAAACTCTGCCCGGGAACGTTTTCTGAGCGTCGCGTATA
AAGTTGGGTGGGGATCCGCTCTCTTGACCTATCCTTTCTACTAGGGAAGA
CAAGTAACACAGCCACGGCCACACCCATACAGTACAGTCCATGTTTTGTC
CTGCTCTCCTTGTATGTAGTCTAAACCTAGGGTTCGCAAATAATGGCTGG
CTGCGCTCTCGGCGGTGCGCTGCACGTAGTCACAATGTCCATGAAGCGAT
GTTGAGAAGTTCGTTGAGTACAAAATTGAACAACTGTTCCGAAACGATGA
CGACAGAGGTTCCTTCGTACTACGTATATTTACTGCCTCACCTGATGGTT
GAGTTGGGCTGGAACGCGATTTGAAGTACGGAACAATGGTCCGAAGAATG
TCTTCTTGTCCGGTTTGTGTATGCAGGTTTCCCTTCCAAGAGCGGGCGCT
CGGCTTTGGCTGTCGAAGAATGTCGTCACCCTAGTACTCTTGTCCATATT
GTACCTTCACAACCCACCCCCCCTGTTGCACTGTTTCGCTTTGAAACTTT
GCCATAGACAACAGTCAGTACTCGTGAAAAAATGGCTTTAAGTAAATTCC
GGCTCTAAGATTAAAACAAGACGACATATTTCGTGAGGTCATCACTCATC
ACGCAAATGCCACCGTCTTTGAATATACAGTAGATAACACACCATTCGAC
TAACATAAAAGTAGGAGTTCAAGGTTACCGCTCGGGTTTACTTGTTTATT
AAATAGGCTTGTTGTTGTGGCTCTCATAGCGGCATTCTGTGAAGGTTTAC
CTCTTTCGTTTGAGTCTACATACCGATGTTACATGCACACACTGCAGTAC
TTCAGACTGACAGGTGTACCCTTGAAAAGTGCGAAAACCAGGCTGGAAAT
TGAATCATAGTTTTTCATGCGAGGGTCGATGCTGCGCACAAGAATCAGCC
TTAACCCTTAAACGCTGACTACTGGGTCATATTTTCACTGTCCATGCCCA
TGTTCACACGCTTACCTTACTCGATAAAAAGTCATCATTGAATCCCACAG
TTGAGACCCCAGAGGAACCTCATGCCTTCGCTGGTCTTTACCCCGTCCTG
TCAGGCTGACGATCTGGACTTCACGGTCGAAGTACTAACCGTGGGGTCTG
GGGAAGGGGGCAAGCGATTGGATGCCTTCTTAGCGACACGAATGCCTGAG
CAATCCAGAAGCTATTTCGGGGGTCTTTGCCAGCTGGGTATGGTGCTTGT
CGGCGGGAAAAACTCAAAAAAAAGCGTGCAGGTGGAGGAGGGTCAGGAGG
TGGAGGTCCGGTTTGTCGTCAGCCCAGAGCTGTCTTTAGAAGGAGAAAAC
ATTCCGTTAGATGTGAGTTTGCAAATGGCGAAAAATCGATTTTCCTTCAA
AAGAAGGAAAATTAGGTTCGAACGAACAGTTTCCGGAAAAGCAAGAGGTA
ATACGTACAATCGTAGGAAGGGCGACAGTACGTCGTCAGCTCAGCCCCTC
ATGAGGCCATTGGATCTCGGTTCAGACAGTACCTGCATCAAACCGTTGCG
CGTGCGTATTGCAAACATCTTCACAGAATTGGCTCCGCCCTTGAAGCTTG
TTTTTTTTTCAGACGAAAAAAAACATAGCTGATACATGGCGTCAGATTCG
CAGTTCTGTTCCAGGGCATCGATTACATTTTAGTAAAGGCGTTGGTCGTA
CATGTCGCGAATAAAGAACCGCACTGTCAGTGGCGCGCTGACACGCCTCT
GCGTGAAAAGCCCTCTACCGTGAATACAATGGACGGGCTTTGCTGTAGTC
CCCCATACACCCCCGCCGCCCTGTTTTCAAGAATGATCGGGTACGTACTA
TGCGGGGAATTGCAATATAGTATGCCAATATAGAGGACAAGACCTATTTG
CTGCGGTTTAGCCTGCGACAAGAGTTGAAAACCGAATGATCTTGTCCCAA
ACTCGAAGATTGCCAATAACGTATACCATATATGGTTGTACCCATAGTTT
CCTGTGTAACATATCCATCATGCCCCGCAGCTGCGATAGAACCGCCTTCT
AGCCATCGCTCGCACATGGTCACCACTCTGGGTGCACAGCGGGGCGTACC
AGATACGAGAGGGTAGCAGCAAGCTGAATTCAAATCTCCAAAACTCTGAA
CTCTTTTGTACATTTCAAGATTGATGGCAAGCGTAAATAATGCCCTCGTA
CGTATTCACGATTTTTGATATTGTGGGTTCGAATAGATTTTTCACATCCT
CCATGAAACACGCTTGGATTTTTCTTGAAATAAAATCGAGCGATGTGACT
TCATTACACACCCGCCGTTGCACATGATAGCAGTGATAAGAATGCGTCGC
CAAAATCTTCAGTCGGTACCCTTGGCGTCGTAAAACAAGACCAAAACAGG
CGTTTGCTTCTCCGTCCCATTTTATTCCTCCGCGTGTTGTCATTTTCGGG
AGGATTTTCTTCGTTCCGGGATAGTAATTTTCGTGCGGACGCATTCACCT
GCCACGCCCACTAAACACGACAGATTCTGTTCGAAGATGATGACATAATT
GCGATCAGTAAACCTGCGGGGATGGTGGTGCACCCTGCTCCCGGCAGCTG
GAACGGCACCTTCGTGAACGCGCTGGTTTACCACTTGGCGCAGCAAAACA
GAGAGTTTTCGCCCCCGGTGGACCTGAAGGACGGAGAGCACTACCCTTCT
TTGCGCCCGGGCGTTGTTCACCGATTGGATAAGGGTACTACCGGCGTACT
CCTCGCGGCGAAGAATCCGACTATGCAAGCGAAGCTGGCCACACTCTTTG
CCGAGCGAGAGGTGAAAGGCAGGGAGGGGAGTTTGCTGCATTCCTCCTTG
CTCAGTTGCTTGCTTGCCACATCACGTCGCCCCCCGTAGGTTTCCTCGAC
GACTTTGAACTATGATGGAGGAGAGTGCGAACCCTTCGTGTCCAGGAGGG
GACACCGCTGCCGCCCCCACCCAGTAGTACTAAATTGACTGAACATACTT
CCTAGCCCCTCCTCTCCTCCTTTTTTTCGGGGGGTGTTTTGTATAAGTTT
TAGGGAGCGCTAAGTGGCGGTTCGATGAAAGACGTAATGTGCATGTTTTA
ATAGTATGACAGTATTCGAAAAGACGAGCGACTGTAGAATACTCATCGCT
GTTCACCACCCCCCCTTATTGATATTTTTTCTGAAAAATCTGTACAATTG
CAAATCAAAGTCAGCTCCATAGCCTCAACATAAGTATAATAAAGTTATTT
AGTATGAGGTTCAGAGTTACAATACCACTGACTGAGGCAGGGGCAATTTA
GTACAGTTATGAAAAATTCAGTTTGTGAAATACAGAGTTGTTTTAATTGT
CATGGTGTCGGTCGTTCATTTGAGGACAGTTTCATGTGTTACTTACCGTA
TACATGCGATTGATGCAGTGATGTGCCCCCCCCCCCCCCCTCCCCCCTCC
CCCCTCCTACTTCATGTTCCCTCCTTGCAGATTAAGAAGTCGTACCTGGC
GGTATGCGTGGGAAACCCTGGAGAGGCGGCTGTGATTGATGTTCCTATTG
GACGGCATCCCAGGCATAGACAAAGAATGGTTGCGGTTCCAACCATACAG
CCAAACATTCAGTCGCGAAGAGCGCTATCTGTTGTTTCTACCGCGGCCTT
TGATGGGAAGCTTAGCGTGGTGGAGGTGGGTATCGAGACCGGACGGACGC
ATCAGATCAGGGTGCACATGCAGGTAGGTACGTACTGGAAGAAAAAATTA
ATGAACGCCGTTTTAAGTTGATTTACGTAATACATACATATACATTTGAA
CCCGAAGAGCCAATTAGAGAAACTGCTGGTTACTCTTTAAGTTCATGGTC
ATTCTTCACAATCGATATTGCATTTTCCCCCCCTCCATATCTACTAAATT
ATTTTGTGACTATCACTTGGTAATATTCGAACTTTCACCTCTGCTTTCAT
GTGTTCGATGTGTCGTTGCGTTGATTTTATGCATGGGTTCACGTGTAGAT
ATATTGCTCTTTTTTCGTGCGTTCAAGTGATGATGATGCTGATAGTGGCG
GTAATGAAGAGGTCTGGGTACGGTACGCTGCTGCATTGCCTATAGGTTGC
GAGTGAGTCTGAGGTCACTTCCTCAGAGGCCCACTGACATACATACATGT
GGTTATTGTCGGCAAGACGGGCTGCTGCTTATGGAATACAATCCGTAGTG
TATGGTTCTCTTGCACCCTGGCTACTGATGACTTATTCCAAACTTTGACT
TCTTGAAAAAAGCGAGACTTTGTACAGCCGAAAGAAGAACCCGTGTGTCT
TTTGATTCATATCTAGTTATACATGTTGTCCGAGATCTGTCCAATGACAC
AAGTTTCGGTGTCAACGAGTGGCATCATTTTTGAGTCAGTTGAGCTTGAG
AAGCACCATCATGAGGGTGCTGTACAACAAAAGATACGGTATAGATCCCC
CGAGACTCTGAGGCAACCGTAGAGGGTTATGGTAACAGTCAGTGCTGACA
AAAAATAAAACCCAAACCAAACTTGAGTATTCATCATCTCCGGCCGTGTT
TGATCAGTATATTTTTCCCGCTAAGCTTTGTGTGGTGTTTTTTTTTCTTC
ATATACAATATATGGAGTATGTGTACTTCCGGTCAGCCTCGCACGGGTCA
TATGGCTATTCGCGGCGAGTCGTGAAAAACGGCTTGAAATAGTTCTGCTT
TGGCGGCGTTCTCCCTTCGAGGACGCGTGATAAATTATGTAGCGGCTATG
GCATGAGAAAAAATAGTATGCCCCCCACCTTACGTCTGCGGACACATACA
TCCCTCCTCGGCAGTCATGGCACCTTGCTCAAGGTACTACGTTGTCTTAC
AAAGTCTCCCTTCCTCACGCCTGATAAGTCAAACATCGGGAAATCAAAGT
CCACAATTGCTACTTTACTGTTTCTTTGACAAGCCGAAGAGAGGATTCTT
GTTTCGTGGTTGACGTACGTACCGACGTGGCCACTTCGTTCCCATGTTGT
GTAGCACTCACCCCTGAACTTTAGGTTCGCGGGGTATGGATCATTCGAGA
TACTCTTTTTCAAAGGATCCCAACGTAGCGGGGTGTGTTACATTACGCTG
GTTCCGCTGTATACTTCATTTTGCCCCCTACATGCATCATGTATATAGTA
CCCTCGGGGCAACCACTCTGAATTACACTACGTCACATTACGCGATGTGA
TGGTTTTTTCTTGCATTTTGTTTTGGGTATTTGTTTTTATCACGACCTTG
ACAATATTTTTAATCCTTGCGATGTCCATCTCGTGTTCCGGCTTTCGGCA
GCATCGACGCACACCCGTTTTAGGTGATGAGGTTTACGGCAACAAAGACT
GGAACCGTAGGTTGCAGCAGAGCACTGGCATGACCAGGCCGCTCCTGCAC
GCGCAATCTCTGGAATTCGAGCATCCCAAGACTGGTGACCTCATCTCGCT
CGTGGCCCCGCTACCCGATGACATTGCCGCTGTAGTCAGGAGAATATATC
CGCAGGTGAACCCCCCCGCAAATCTTGCATTATCGTATGAGTAGGTCCTC
GGTTGCGATAAATGCATTCCTGCAACACGGGCACACGTTTACTACAGTAC
GGGGCAAAACAGTTAATGTGGGATTGCTAAAATATTGCGCTAATAGTCGC
GATACAGCCATGTCGGGAAACAGCTAGACACAGTATCGAGAACTTGTTAA
AGCAAAAACCGTCCGTGACCAAAATACTGGGGAACACAGCGGAGGAAGCG
TTCCAAAACGACCTCTGTCGCTGTACCGTATGATTTACCGAGGATGTTGA
GTTGTTCGCGATGCGGTATCGCTGGAAGATGAGCAATCATGAGAATTACT
CTCTGTGCCAATGCTTACTTGTGTTTGTGAGGCTTTTTGCCGTCTCGTTG
CCGCACGAGTAGTTTGAAGAACTCGCGAGTCTTTCCGCTTCGAAACAATT
TTTTAAACAGACTGCCCGCAGCGCTCCATAATGATGTGCTTTGGCAGTTT
TAGAGGTGGATGCTCTCGTTGATTTGATATCGTATGAGCGTAAATACCTC
GCCCTGAAATAACGGAGGGCCGCTTGGTTGTTGAAGTTTCCGAAGAGTTT
TCCGCGGGATAAAATGCTTCGGAGAGTTTGCTTACGTTGGAACGTTGCTG
CTCGTTCACGAACTGCAACGCTAATTTCCGAATAAGTGAATCTGTTACGT
ATGTTTCACACTTCACTACGAGATGTAGATATGTAGAGCACCTTTAGTGT
GGTGAGCTACTTAGCCGCTATACACTCGTATGCTGTCGACACGTTCCACT
TTTCCTTTTTTTAGTCTTTTTCGCGGAGGTAGGCACGCAAGCAGGAGGGT
ATTAGACCTAACACGTGGGTTAATTAACGTTCAAAATGCTAAGCCTGAAT
TGGGTTACGGTTTTCTTCGCATATCTTTGGTTGGTGCAGGTGGATGACGA
ACACCCGGAATGGCTTGAGGGGGGAGCAGTCCCGGGAAAGGAGAAGGAGG
AAGAGAACGATGAAGATAAATCGTCGCCGGGATACGTGCCCAAGGATTTG
AGAGATTACAGCCTACACTAGTCGCATAGACCTGTTGAATTGAATGGCTA
GCCATATGAAAAAGCTTGCGAATATACGCGTTGTCAGCATTGTTTATTTG
AATTGTGCTTTCTGCGTCAATCAGCGAGCAATATGCGGCGGAGAGTATGC
AGTGAAATCAAAAGTACTGTTGCATCTTCTGCTCGGGTCGGTGGTCACTA
CCAGTGCATGTTCCGCCGACATCGAAGGGGATTGTGCGCGTCGGATCAAG
CTGATCAAGTGAAATTCATTTATAGCACGCGCGAACGATGTAATACTAGC
AGGTGTCTAGAGCATGGCCCGCTTCAAGACAAGTACATAGTGTGGTGATG
ATAATGTATGTGGCCATCAGATTGGCCAAAATAACCTCATAGCTGGTGGT
GACGAGCAAGCTGCCGGTCATTCTTGGTGACGGGAGTGGTACTAATTTAT
GGCACTTCCCCGGAAGAAGTCGTTCCTAACCCGCGATAAGAGTTTATTAG
ACGCGCGCCCCTATTTTCTGTATTTTCGCGTCTTCACGAAACTCATTCCC
GGACGTGCTGGATATCCCTACTCGCGAGGTTCGCATCTACCTCGAGCTAG
TTGACGTCGCCCCGCGTCATTTTTTCGGGAGGTTCGCGTGGGGGTTGGGG
GTTGAGCAGGTGGATTGTGCGCCAATAATAACTACTC
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Coding sequence (CDS) from alignment at H-paniculata_contig5729:3682..11818+

>mRNA_H-paniculata_contig5729.13285.1 ID=mRNA_H-paniculata_contig5729.13285.1|Name=mRNA_H-paniculata_contig5729.13285.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3054bp|location=Sequence derived from alignment at H-paniculata_contig5729:3682..11818+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCAGAAAATGTTTGAACTTTCTCCTTTTGGCTATGGGTCTGAATAG
ACAGGCTAATTTGTCAAAGAGAAAACCAGCATATTATTTCGGACTGCACT
CAAATTCGGTCTGTAGATATCGCATCGAAAGAGTTACGGGGAGGATGGTG
CTTCTATCAGCGCGCCGACAACAACCACGCCCGTTACATTCTCATAATGT
GGTTCGAAAAGCTGTTTTATTCTTAGGGTGCCTTTTGAGCGGTAGGCTCG
TGCTTGTAAATGGATTTTTCGTTCGTGCTCCTGCCGTAGGACCTTCATTT
CCCACTTGCCATCATGGGCGATGCAGCTTCGCGGGAATAGGGCAGATGCG
ATGTAGTGCGTCGGCGCCTGTGGCAGCAGCAGAAGCCTTGGAGATAGACG
AGATGTTCAGAAAATGTTTGAACTTTCTCCTTTTGGCTATGGGTCTGAAT
AGACAGGCTAATTTGTCAAAGAGAAAACCAGCATATTATTTCGGACTGCA
CTCAAATTCGGTCTGTAGATATCGCATCGAAAGAGTTACGGGGAGGATGG
TGCTTCTATCAGCGCGCCGACAACAACCACGCCCGTTACATTCTCATAAT
GTGGTTCGAAAAGCTGTTTTATTCTTAGGGTGCCTTTTGAGCGGTAGGCT
CGTGCTTGTAAATGGATTTTTCGTTCGTGCTCCTGCCGTAGGACCTTCAT
TTCCCACTTGCCATCATGGGCGATGCAGCTTCGCGGGAATAGGGCAGATG
CGATGTAGTGCGTCGGCGCCTGTGGCAGCAGCAGAAGCCTTGGAGATAGA
CGAGGCTGACGATCTGGACTTCACGGTCGAAGTACTAACCGTGGGGTCTG
GGGAAGGGGGCAAGCGATTGGATGCCTTCTTAGCGACACGAATGCCTGAG
CAATCCAGAAGCTATTTCGGGGGTCTTTGCCAGCTGGGTATGGTGCTTGT
CGGCGGGAAAAACTCAAAAAAAAGCGTGCAGGTGGAGGAGGGTCAGGAGG
TGGAGGTCCGGTTTGTCGTCAGCCCAGAGCTGTCTTTAGAAGGAGAAAAC
ATTCCGTTAGATGCTGACGATCTGGACTTCACGGTCGAAGTACTAACCGT
GGGGTCTGGGGAAGGGGGCAAGCGATTGGATGCCTTCTTAGCGACACGAA
TGCCTGAGCAATCCAGAAGCTATTTCGGGGGTCTTTGCCAGCTGGGTATG
GTGCTTGTCGGCGGGAAAAACTCAAAAAAAAGCGTGCAGGTGGAGGAGGG
TCAGGAGGTGGAGGTCCGGTTTGTCGTCAGCCCAGAGCTGTCTTTAGAAG
GAGAAAACATTCCGTTAGATATTCTGTTCGAAGATGATGACATAATTGCG
ATCAGTAAACCTGCGGGGATGGTGGTGCACCCTGCTCCCGGCAGCTGGAA
CGGCACCTTCGTGAACGCGCTGGTTTACCACTTGGCGCAGCAAAACAGAG
AGTTTTCGCCCCCGGTGGACCTGAAGGACGGAGAGCACTACCCTTCTTTG
CGCCCGGGCGTTGTTCACCGATTGGATAAGGGTACTACCGGCGTACTCCT
CGCGGCGAAGAATCCGACTATGCAAGCGAAGCTGGCCACACTCTTTGCCG
AGCGAGAGATTCTGTTCGAAGATGATGACATAATTGCGATCAGTAAACCT
GCGGGGATGGTGGTGCACCCTGCTCCCGGCAGCTGGAACGGCACCTTCGT
GAACGCGCTGGTTTACCACTTGGCGCAGCAAAACAGAGAGTTTTCGCCCC
CGGTGGACCTGAAGGACGGAGAGCACTACCCTTCTTTGCGCCCGGGCGTT
GTTCACCGATTGGATAAGGGTACTACCGGCGTACTCCTCGCGGCGAAGAA
TCCGACTATGCAAGCGAAGCTGGCCACACTCTTTGCCGAGCGAGAGATTA
AGAAGTCGTACCTGGCGGTATGCGTGGGAAACCCTGGAGAGGCGGCTGTG
ATTGATGTTCCTATTGGACGGCATCCCAGGCATAGACAAAGAATGGTTGC
GGTTCCAACCATACAGCCAAACATTCAGTCGCGAAGAGCGCTATCTGTTG
TTTCTACCGCGGCCTTTGATGGGAAGCTTAGCGTGGTGGAGGTGGGTATC
GAGACCGGACGGACGCATCAGATCAGGGTGCACATGCAGATTAAGAAGTC
GTACCTGGCGGTATGCGTGGGAAACCCTGGAGAGGCGGCTGTGATTGATG
TTCCTATTGGACGGCATCCCAGGCATAGACAAAGAATGGTTGCGGTTCCA
ACCATACAGCCAAACATTCAGTCGCGAAGAGCGCTATCTGTTGTTTCTAC
CGCGGCCTTTGATGGGAAGCTTAGCGTGGTGGAGGTGGGTATCGAGACCG
GACGGACGCATCAGATCAGGGTGCACATGCAGCATCGACGCACACCCGTT
TTAGGTGATGAGGTTTACGGCAACAAAGACTGGAACCGTAGGTTGCAGCA
GAGCACTGGCATGACCAGGCCGCTCCTGCACGCGCAATCTCTGGAATTCG
AGCATCCCAAGACTGGTGACCTCATCTCGCTCGTGGCCCCGCTACCCGAT
GACATTGCCGCTGTAGTCAGGAGAATATATCCGCAGCATCGACGCACACC
CGTTTTAGGTGATGAGGTTTACGGCAACAAAGACTGGAACCGTAGGTTGC
AGCAGAGCACTGGCATGACCAGGCCGCTCCTGCACGCGCAATCTCTGGAA
TTCGAGCATCCCAAGACTGGTGACCTCATCTCGCTCGTGGCCCCGCTACC
CGATGACATTGCCGCTGTAGTCAGGAGAATATATCCGCAGGTGGATGACG
AACACCCGGAATGGCTTGAGGGGGGAGCAGTCCCGGGAAAGGAGAAGGAG
GAAGAGAACGATGAAGATAAATCGTCGCCGGGATACGTGCCCAAGGATTT
GAGAGATTACAGCCTACACTAGGTGGATGACGAACACCCGGAATGGCTTG
AGGGGGGAGCAGTCCCGGGAAAGGAGAAGGAGGAAGAGAACGATGAAGAT
AAATCGTCGCCGGGATACGTGCCCAAGGATTTGAGAGATTACAGCCTACA
CTAG
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