prot_H-paniculata_contig5727.13282.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5727.13282.1
Unique Nameprot_H-paniculata_contig5727.13282.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length61
Homology
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BLAST of mRNA_H-paniculata_contig5727.13282.1 vs. uniprot
Match: D8LBL5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBL5_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 3.120e-16
Identity = 39/56 (69.64%), Postives = 49/56 (87.50%), Query Frame = 0 
Query:    1 MSLYTGSVFSRLSKRSGISESSPLAMHLGNDNAMRKLLRDGVGIKDLQKTYLTLCY 56
            MSL+ GSVFSRLSK+S I +++ LA+HL NDNAMR+LLRDGVGI ++QK YL+LCY
Sbjct:    1 MSLHGGSVFSRLSKQSAIRDTTQLAVHLSNDNAMRRLLRDGVGINEMQKKYLSLCY 56
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BLAST of mRNA_H-paniculata_contig5727.13282.1 vs. uniprot
Match: A0A6H5K7P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P8_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 3.140e-16
Identity = 40/58 (68.97%), Postives = 49/58 (84.48%), Query Frame = 0 
Query:    1 MSLYTGSVFSRLSKRSGISESSPLAMHLGNDNAMRKLLRDGVGIKDLQKTYLTLCYVS 58
            MSL+ GSVFSRLSK+S I  ++ LA+HL ND AMR+LLRDGVGI ++QK YL+LCYVS
Sbjct:   61 MSLHGGSVFSRLSKQSAIRNTTQLAVHLSNDTAMRRLLRDGVGINEMQKKYLSLCYVS 118
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5727.13282.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBL5_ECTSI3.120e-1669.64Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5K7P8_9PHAE3.140e-1668.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5727contigH-paniculata_contig5727:898..3245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5727.13282.1mRNA_H-paniculata_contig5727.13282.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5727 898..3303 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5727.13282.1 ID=prot_H-paniculata_contig5727.13282.1|Name=mRNA_H-paniculata_contig5727.13282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=61bp
MSLYTGSVFSRLSKRSGISESSPLAMHLGNDNAMRKLLRDGVGIKDLQKT
YLTLCYVSSC*
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