mRNA_H-paniculata_contig5720.13272.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5720.13272.1 vs. uniprot
Match: D7FNR9_ECTSI (Lactoylglutathione lyase family protein / glyoxalase I family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR9_ECTSI) HSP 1 Score: 215 bits (547), Expect = 1.100e-62 Identity = 103/124 (83.06%), Postives = 111/124 (89.52%), Query Frame = 3
Query: 204 SAVSEFGGIQHAGVLVSDAKKSKEFYVDVLGFDDDSSLRPDDKLPFDGAFVRAGATQIHLMELPNPDPVSGRPEHGGRDRHVAFTIRDLTPLKNRLDHAGVTYTMSKSGRAALFCRDLDGNAFE 575
++ EFGGIQHAGVLVSD K SKEFYV+V GF+D+S LRP +LPFDGAFVRAGATQ+HLMELPNPDPV GRPEHGGRDRHVAF+I DL PLK RLD AGVTYTMSKSGRAALFCRDLDGNAFE
Sbjct: 40 ASAPEFGGIQHAGVLVSDTKASKEFYVNVFGFEDESPLRP--QLPFDGAFVRAGATQVHLMELPNPDPVDGRPEHGGRDRHVAFSIADLRPLKGRLDSAGVTYTMSKSGRAALFCRDLDGNAFE 161
BLAST of mRNA_H-paniculata_contig5720.13272.1 vs. uniprot
Match: A0A7S3RP39_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RP39_9SPIT) HSP 1 Score: 179 bits (455), Expect = 1.840e-49 Identity = 86/134 (64.18%), Postives = 103/134 (76.87%), Query Frame = 3
Query: 189 VSPCMSAVSEFGGIQHAGVLVSDAKKSKEFYVDVLGFDDDSSLRPDDKLPFDGAFVRAGATQIHLMELPNPDPVSGRPEHGGRDRHVAFTIRDLTPLKNRLDHAGVTYTMSKSGRAALFCRDLDGNAFEVRYDP 590
++P MS ++GG+ HAGVLV+D +++ FY VLG +D++ LRP+ LPF GAFVRAG QIH+MELPNPDPV GRPEHGGRDRH+A TI+DL PLK +L V YTMSKSGRAALFCRDLDGNA E P
Sbjct: 32 LAPAMSI--QYGGVAHAGVLVADTQRALRFYTAVLGMEDETHLRPN--LPFPGAFVRAGQQQIHIMELPNPDPVDGRPEHGGRDRHLALTIKDLEPLKKKLQAEDVVYTMSKSGRAALFCRDLDGNAMEFMETP 161
BLAST of mRNA_H-paniculata_contig5720.13272.1 vs. uniprot
Match: A0A4D9CZQ2_9STRA (VOC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZQ2_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.940e-49 Identity = 85/119 (71.43%), Postives = 95/119 (79.83%), Query Frame = 3
Query: 219 FGGIQHAGVLVSDAKKSKEFYVDVLGFDDDSSLRPDDKLPFDGAFVRAGATQIHLMELPNPDPVSGRPEHGGRDRHVAFTIRDLTPLKNRLDHAGVTYTMSKSGRAALFCRDLDGNAFE 575
FGGI HAG+LVSD + S FY+DVLGF+DD+ LRP LPF GAFVR GA QIHLMELPNPDP GRPEHGGRDRHVAFT+ ++ PL RL GV +TMSKSGR A+FCRDLDGNA E
Sbjct: 41 FGGIAHAGILVSDTQSSMRFYLDVLGFEDDTHLRPS-TLPFPGAFVRGGAQQIHLMELPNPDPTRGRPEHGGRDRHVAFTVDNIDPLMARLTEEGVPFTMSKSGRRAVFCRDLDGNALE 158
BLAST of mRNA_H-paniculata_contig5720.13272.1 vs. uniprot
Match: A0A835Z9T1_9STRA (Lactoylglutathione lyase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9T1_9STRA) HSP 1 Score: 170 bits (431), Expect = 5.620e-46 Identity = 87/134 (64.93%), Postives = 97/134 (72.39%), Query Frame = 3
Query: 192 SPCMSAVSE------FGGIQHAGVLVSDAKKSKEFYVDVLGFDDDSSLRPDDKLPFDGAFVRAGATQIHLMELPNPDPVSGRPEHGGRDRHVAFTIRDLTPLKNRLDHAGVTYTMSKSGRAALFCRDLDGNAFE 575
S C SA FGG+QHAGVL S+ + S FY +VLGF D++ LRP+ LPF GAFVRAG QIHLMEL NPDPV GRPEHGGRDRH+AFTIR L PL+ L G TYT SKSGRAA+F RD DGNAFE
Sbjct: 31 SVCWSATESVDEAPVFGGLQHAGVLCSNTEASLAFYTEVLGFQDETELRPN--LPFKGAFVRAGGQQIHLMELENPDPVDGRPEHGGRDRHLAFTIRSLAPLEAALKRHGRTYTRSKSGRAAIFTRDPDGNAFE 162
BLAST of mRNA_H-paniculata_contig5720.13272.1 vs. uniprot
Match: A0A7S2RGE4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGE4_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.190e-45 Identity = 91/161 (56.52%), Postives = 107/161 (66.46%), Query Frame = 3
Query: 114 PLSSAFVAPLTNLFRNARLHVSITP-----VSPCMSAVS--EFGGIQHAGVLVSDAKKSKEFYVDVLGFDDDSSLRPDDKLPFDGAFVRAGATQIHLMELPNPDPVSGRPEHGGRDRHVAFTIRDLTPLKNRLDHAGVTYTMSKSGRAALFCRDLDGNAFE 575
PLS+A A L L VS P V P SA E+GGI H GVL+ D + S +Y VLGF D+S LRP KLP+ GAF+RAG QIHLM+LPNPDP+ GRPEHGGRDRHVA ++ DL PL +RL+ + +TMSKSGR ALFCRD DGNA E
Sbjct: 8 PLSAALFATAAALVPRPVLRVSRVPSRALSVGPRFSAPGAVEYGGINHVGVLIQDVESSVAWYTSVLGFLDESHLRPT-KLPYPGAFLRAGDQQIHLMQLPNPDPIDGRPEHGGRDRHVALSVVDLDPLISRLNDQEIPFTMSKSGRRALFCRDPDGNAME 167
BLAST of mRNA_H-paniculata_contig5720.13272.1 vs. uniprot
Match: A0A8J6C8W0_DIALT (VOC domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C8W0_DIALT) HSP 1 Score: 167 bits (422), Expect = 1.130e-44 Identity = 78/123 (63.41%), Postives = 92/123 (74.80%), Query Frame = 3
Query: 207 AVSEFGGIQHAGVLVSDAKKSKEFYVDVLGFDDDSSLRPDDKLPFDGAFVRAGATQIHLMELPNPDPVSGRPEHGGRDRHVAFTIRDLTPLKNRLDHAGVTYTMSKSGRAALFCRDLDGNAFE 575
A +FGGIQHAGVLVSD +S +FY ++LG DD++ RP LPF GAFVR GA Q+HLMELPNPDP+ GRP HGGRDRH+A T+ + PL+ LD G +TMS SGR ALFCRD DGNA E
Sbjct: 39 AAVDFGGIQHAGVLVSDTARSLDFYTNILGMGDDTAHRPS-TLPFAGAFVRCGAHQLHLMELPNPDPIDGRPAHGGRDRHIAITVASIEPLRESLDAVGWAHTMSMSGRRALFCRDPDGNALE 160
BLAST of mRNA_H-paniculata_contig5720.13272.1 vs. uniprot
Match: A0A7S1XHW6_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XHW6_9RHOD) HSP 1 Score: 164 bits (416), Expect = 4.820e-44 Identity = 75/124 (60.48%), Postives = 96/124 (77.42%), Query Frame = 3
Query: 204 SAVSEFGGIQHAGVLVSDAKKSKEFYVDVLGFDDDSSLRPDDKLPFDGAFVRAGATQIHLMELPNPDPVSGRPEHGGRDRHVAFTIRDLTPLKNRLDHAGVTYTMSKSGRAALFCRDLDGNAFE 575
SA ++GG+ HAG++V D +++ FY DVLG DD+++RP+ L F GAFVRAG+ QIHLMELPNPDP +GRP+HGGRD+HVA T+ ++ PL L+ GV YTMSKSGR ALFCRD+D NA E
Sbjct: 26 SAAIKYGGLDHAGMIVEDTQRALRFYCDVLGMQDDTAVRPE--LAFGGAFVRAGSHQIHLMELPNPDPKTGRPQHGGRDKHVALTVDNIDPLVESLERNGVAYTMSKSGRRALFCRDVDSNALE 147
BLAST of mRNA_H-paniculata_contig5720.13272.1 vs. uniprot
Match: A0A5J4YUU9_PORPP (Protein YwkD n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUU9_PORPP) HSP 1 Score: 158 bits (399), Expect = 1.490e-41 Identity = 76/117 (64.96%), Postives = 87/117 (74.36%), Query Frame = 3
Query: 225 GIQHAGVLVSDAKKSKEFYVDVLGFDDDSSLRPDDKLPFDGAFVRAGATQIHLMELPNPDPVSGRPEHGGRDRHVAFTIRDLTPLKNRLDHAGVTYTMSKSGRAALFCRDLDGNAFE 575
G HAG++V D K+ EFYV+VLG DD++ RP+ L F GAFVRAG QIHLMELPNPD GRPEHGGRD+HVA + D+ PL L+ GV YTMSKSGR ALFCRDLDGNA E
Sbjct: 42 GFSHAGMIVEDTAKALEFYVNVLGMSDDTATRPN--LAFGGAFVRAGEHQIHLMELPNPDAKDGRPEHGGRDKHVALNVEDIDPLVESLNANGVFYTMSKSGRRALFCRDLDGNALE 156
BLAST of mRNA_H-paniculata_contig5720.13272.1 vs. uniprot
Match: A0A6U0W6J8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0W6J8_9STRA) HSP 1 Score: 157 bits (396), Expect = 7.970e-41 Identity = 73/121 (60.33%), Postives = 95/121 (78.51%), Query Frame = 3
Query: 216 EFGGIQHAGVLVSDAKKSKEFYVDVLGFDDDSSLRPDDKLPFDGAFVR-AGATQIHLMELPNPDPVSGRPEHGGRDRHVAFTIRDLTPLKNRLDHAGVTYTMSKSGRAALFCRDLDGNAFE 575
++ IQH GVLVS+ +++K+FY++VLGF D+S LR + KLP+ GAF++ AG QIHLM+LP+ DP GRPEHGGRDRH+AF + + PLK +L+ G+ YTMS SGRAALFCRD DGNA E
Sbjct: 59 QYEAIQHVGVLVSEVERAKDFYINVLGFTDESHLR-NPKLPYPGAFLKVAGGQQIHLMQLPSVDPKDGRPEHGGRDRHIAFFVSSIAPLKEKLEGLGIPYTMSMSGRAALFCRDPDGNAME 178
BLAST of mRNA_H-paniculata_contig5720.13272.1 vs. uniprot
Match: A0A2V3IT82_9FLOR (VOC domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT82_9FLOR) HSP 1 Score: 155 bits (393), Expect = 1.170e-40 Identity = 82/142 (57.75%), Postives = 96/142 (67.61%), Query Frame = 3
Query: 162 ARLHVSITPVSPCMSAVSEFGGIQHAGVLVSDAKKSKEFYVDVLGFDDDSSLRPDDKLPFDGAFVRAGATQIHLMELPNPDPVSGRPEHGGRDRHVAFTIRDLTPLKNRLDHAGVTYTMSKSGRAALFCRDLDGNAFEVRYD 587
AR+ S P +S +G IQHAGVLV D + +K FY+ V G DD LR + KLPF+GAF+RAGA+QIHLMELP+PDP+ GRPEHGGRDRHVA T+ DL PL L +T SKSGR ALF RDLD NA E D
Sbjct: 26 ARMSASSPDAVPALS----YGRIQHAGVLVRDTQVAKRFYMAVFGMADDDHLR-NPKLPFNGAFLRAGASQIHLMELPSPDPLEGRPEHGGRDRHVAVTVNDLQPLIASLQRHHRPFTFSKSGRRALFTRDLDSNAIEFIED 162 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5720.13272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5720.13272.1 >prot_H-paniculata_contig5720.13272.1 ID=prot_H-paniculata_contig5720.13272.1|Name=mRNA_H-paniculata_contig5720.13272.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=183bp MGRDFSSRCISVLILLLFPLSSAFVAPLTNLFRNARLHVSITPVSPCMSAback to top mRNA from alignment at H-paniculata_contig5720:4360..8106+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5720.13272.1 ID=mRNA_H-paniculata_contig5720.13272.1|Name=mRNA_H-paniculata_contig5720.13272.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3747bp|location=Sequence derived from alignment at H-paniculata_contig5720:4360..8106+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5720:4360..8106+ >mRNA_H-paniculata_contig5720.13272.1 ID=mRNA_H-paniculata_contig5720.13272.1|Name=mRNA_H-paniculata_contig5720.13272.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1098bp|location=Sequence derived from alignment at H-paniculata_contig5720:4360..8106+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |