prot_H-paniculata_contig57194.13270.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig57194.13270.1
Unique Nameprot_H-paniculata_contig57194.13270.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length132
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig57194.13270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 14..30
e-value: 0.0049
score: 25.5
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 15..30
e-value: 2.8E-4
score: 20.8
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 15..30
score: 8.944
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 3..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig57194contigH-paniculata_contig57194:546..941 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig57194.13270.1mRNA_H-paniculata_contig57194.13270.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig57194 546..941 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig57194.13270.1 ID=prot_H-paniculata_contig57194.13270.1|Name=mRNA_H-paniculata_contig57194.13270.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bp
KGDDQKKTKKDRGLCWVCGSSEHIARRCPKRHHDTNEGIVALLAIIKGPK
AMTTVTDDRKTIGNPAVTREKEHWNLDTGATDHMTSDEIAFEDYTPALPG
TMCEIANRTFVPVEGWGRLVLLVSQPGETRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf