prot_H-paniculata_contig5718.13269.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5718.13269.1
Unique Nameprot_H-paniculata_contig5718.13269.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length466
Homology
BLAST of mRNA_H-paniculata_contig5718.13269.1 vs. uniprot
Match: D7FSA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA4_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 1.570e-56
Identity = 101/167 (60.48%), Postives = 129/167 (77.25%), Query Frame = 0
Query:  299 TLLQDQVLHDQEQYRPP-DKYPGEAPGTQQRPSSLFRRAGGGGVFFVFFILVWRSLSNYENVEQMAGGIRGMMLIPAVALLLGNVVCMCLSLVQSATTRQKSRMKTMLSIDAVAEGLLLLYNLLALMGGSGEAHVAREEFISRLLANAWFLSICFTFAKARWVADGA 464
            T LQ+Q    Q  YR    + PG+A GTQQ  S+LFRR+G GGVFF+F ++V RSL++YE  EQMAG +R M ++PAV L LGN+VCMCLSLV+SAT +QK+RMKTML++DAV EGLLL+YN+L L+GG+    V +EEF+ R+L N  F+S+C TFAKARWVADGA
Sbjct:   20 TPLQEQAY--QNMYRNQRTQLPGQAVGTQQPSSTLFRRSGAGGVFFIFLVMVCRSLNHYEYAEQMAGALRAMSMVPAVGLFLGNLVCMCLSLVESATNKQKARMKTMLTVDAVCEGLLLVYNMLLLLGGASGL-VPKEEFVGRILTNVVFMSLCVTFAKARWVADGA 183          
BLAST of mRNA_H-paniculata_contig5718.13269.1 vs. uniprot
Match: A0A6H5JEE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEE0_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 1.640e-56
Identity = 116/212 (54.72%), Postives = 145/212 (68.40%), Query Frame = 0
Query:  254 YDDAEYRRDSETWDPAAM-VGDGEQEGAAAPDDLSRIPQQHQHASHTLLQDQVLHDQEQYRPPDKYPGEAPGTQQRPSSLFRRAGGGGVFFVFFILVWRSLSNYENVEQMAGGIRGMMLIPAVALLLGNVVCMCLSLVQSATTRQKSRMKTMLSIDAVAEGLLLLYNLLALMGGSGEAHVAREEFISRLLANAWFLSICFTFAKARWVADGA 464
            +D     RD E    AAM V +   EGA A     R P Q +HA   + ++Q            + PG+A GTQQ  S+LFRR+G GGVFF+F ++V RSL++YE  EQMAG +R M L+PAV L LGN+VCMCLSLV+SAT RQK+RMKTMLS+DAV EGLLL+YN+L L+GG+    V +EEF+ R+L N  FLS+C TFAKARWVADGA
Sbjct:  183 HDQGNDNRDEEGATGAAMGVPEMVSEGAPASTPPPRTPLQ-EHAFQNMYRNQRT----------QLPGQAVGTQQPSSTLFRRSGAGGVFFIFLVMVCRSLNHYEYAEQMAGALRAMSLVPAVGLFLGNLVCMCLSLVESATNRQKARMKTMLSVDAVCEGLLLVYNMLLLLGGASGL-VPKEEFVGRILTNVVFLSLCVTFAKARWVADGA 382          
BLAST of mRNA_H-paniculata_contig5718.13269.1 vs. uniprot
Match: A0A835ZG70_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG70_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.050e-19
Identity = 57/149 (38.26%), Postives = 89/149 (59.73%), Query Frame = 0
Query:  315 PDKYPGEAPGTQQRP-SSLF-RRAGGGGVFFVFFILVWRSLSNYENVEQMAGGI-RGMMLIPAVALLLGNVVCMCLSLVQSATTRQKSRMKTMLSIDAVAEGLLLLYNLLALMGGSGEAHVAREEFISRLLANAWFLSICFTFAKARWV 460
            P +  G A GT   P +SLF R+    G+  ++FI+VWR + +YE  + +   + R + + P++ALL+ N  C+ L  +  AT + K RMK +L+++++AE +LL  N   L+   G A V + E++S +L N WFLSIC  FAK  WV
Sbjct:  160 PGRPGGGAGGTATDPRNSLFMRQISAKGLAMIYFIMVWRLMHHYETADALRRPLARALAIAPSLALLVANAACLALCCLSGATLKHKLRMKLVLTLNSLAEAVLLGVNTWLLV--MGPARVPKGEYVSSMLVNVWFLSICHNFAKMHWV 306          
BLAST of mRNA_H-paniculata_contig5718.13269.1 vs. uniprot
Match: A0A7S4DDY4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDY4_HETAK)

HSP 1 Score: 90.9 bits (224), Expect = 1.080e-16
Identity = 50/128 (39.06%), Postives = 81/128 (63.28%), Query Frame = 0
Query:  337 GGGGVFFVFFILVWRSLSNYENVEQMAGG-IRGMMLIPAVALLLGNVVCMCLSLVQSATTRQKSRMKTMLSIDAVAEGLLLLYNLLALMGGSGEAHVAREEFISRLLANAWFLSICFTFAKARWVADG 463
            G   +  +F  LVWRS+ NYE   Q+  G +R + ++P V L L NV    +   +++   QKS+MK +L+++ ++E +LL+YN++ +M GS      RE ++ R+L N WFL++ F+FAKARW+ DG
Sbjct:  148 GPSSMTILFVCLVWRSIHNYELACQIPSGTMRILCVVPTVLLFLFNVAGCIMCFFRAS---QKSKMKAILNMNGLSEMVLLVYNIVNMMKGSN-MWTPREVYVGRVLVNFWFLTLWFSFAKARWITDG 271          
BLAST of mRNA_H-paniculata_contig5718.13269.1 vs. uniprot
Match: A0A7S2KJZ1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KJZ1_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.360e-9
Identity = 54/180 (30.00%), Postives = 86/180 (47.78%), Query Frame = 0
Query:  279 GAAAPDDLSRIPQQHQHASHTLLQDQVLHDQEQYRPPDKYPGEAPGTQQRPSSLFRRAGGGGVFFVFFILVWRSLSNYENVEQMAGGIRGMMLIPAVALLLGNVVCMCLSLVQSATTRQ--KSRMKTMLSIDAVAEGLLLLYNLLALMGGSGEAHVAREEFISRLLANAWFLSICFTFAK 456
            G  APDD+   P  +Q     +         E  +P   + GEA     +P  LF       V   FF+++WRS+ ++E  +   G  R  ++IP VAL LGN++  C++   S  +    K R K +L++D + E +L   N+L LM      +VARE +I   + N  F+ +C +  K
Sbjct:   38 GRVAPDDIVTPPSAYQ-----VPNQDSWEQYENQQPQQSHYGEAKSF--KPLELF---SAPSVAITFFLMIWRSVHHFEIADSFKGAKRIFLVIPIVALFLGNLLA-CVTAFTSGLSSHVSKRRSKAILNLDKLVELILFANNILKLMFFPSP-YVAREIYIGGAIHNVMFILLCHSITK 205          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5718.13269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FSA4_ECTSI1.570e-5660.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEE0_9PHAE1.640e-5654.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZG70_9STRA1.050e-1938.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DDY4_HETAK1.080e-1639.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2KJZ1_9STRA2.360e-930.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 437..455
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 332..350
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..331
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 394..404
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 351..369
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 456..465
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 426..436
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 405..425
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 370..393
NoneNo IPR availableTMHMMTMhelixcoord: 332..354
NoneNo IPR availableTMHMMTMhelixcoord: 404..426
NoneNo IPR availableTMHMMTMhelixcoord: 369..391
NoneNo IPR availableTMHMMTMhelixcoord: 441..460

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5718contigH-paniculata_contig5718:3424..11407 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5718.13269.1mRNA_H-paniculata_contig5718.13269.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5718 3137..12730 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5718.13269.1 ID=prot_H-paniculata_contig5718.13269.1|Name=mRNA_H-paniculata_contig5718.13269.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=466bp
MTNSNTAGSSSPTPRLTRTLKSRRTSAMPSYALLLASSFVERSSSAGLQG
GNGSPPPPFVHGMSRRGQGGGGEAGEEDGRGNNRRNGIPPSTLSRFDANL
HIHHPQRQGATDGSAAAGDGWGGGEEGRAGLRSTSQSTNNWRDDVHNRNS
DHNGPSAGTSVSSRYPTRRAAATAAAAAGGGTASPSWSWKHSAESYPTMS
SSGRDGALAAERKRALSAAGRSEDDDGMMRPVLFGHRAGGGGGGSVGEHQ
SEVYDDAEYRRDSETWDPAAMVGDGEQEGAAAPDDLSRIPQQHQHASHTL
LQDQVLHDQEQYRPPDKYPGEAPGTQQRPSSLFRRAGGGGVFFVFFILVW
RSLSNYENVEQMAGGIRGMMLIPAVALLLGNVVCMCLSLVQSATTRQKSR
MKTMLSIDAVAEGLLLLYNLLALMGGSGEAHVAREEFISRLLANAWFLSI
CFTFAKARWVADGAW*
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