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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 327 |
| Cds size | 312 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5715.13267.1 >prot_H-paniculata_contig5715.13267.1 ID=prot_H-paniculata_contig5715.13267.1|Name=mRNA_H-paniculata_contig5715.13267.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp
MERPKQMGTSNQRRAETPLQNQGRAGTPSTPFTASSSSPRLRKPQLPYTP
RSGGPQAASTSAGGVGSVPFTPPSVRRLGIHIPPSPEAAGMFGLSATNGM
KHA* back to topmRNA from alignment at H-paniculata_contig5715:10148..12886+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5715.13267.1 ID=mRNA_H-paniculata_contig5715.13267.1|Name=mRNA_H-paniculata_contig5715.13267.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2739bp|location=Sequence derived from alignment at H-paniculata_contig5715:10148..12886+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACTCAGCAACGGGCATGGAACGGCCAAAACAAATGGGCACATCGAACCA
ACGACGAGCAGAAACTCCTCTGCAGAATCAAGGTCGAGCAGGAACCCCAT
CAACTCCATTCACCGCCAGCTCGTCGTCGCCACGATTACGTAAGAGTTAT
TTGATAGCCACACAATATACGAGTATACACCTAGCGTAATATTTTTATAT
ATGGTTGACTGACTCTGCGGGGAGAAAACGAGAGGGGTGTGCGAGTGCGT
GCTATGATTGTCTGGAAGTAACGTGAGGAACGTGTTCTCGCAGCCAAAAT
TCGAAACAAAAAGTTGAACAATATATGTATATATATTTGCCGGTATGTTT
TCACAAAATCGGAGCTGAGAGGGGATTTGAGGGGGGTTGAGGGTTCTGGG
ACATGGTAAATTAACCGCTTCGGCGGCGACTGTCTAATTATTTCAAACAA
AAAAGCAGCTGATAGTCATGGTGGTGATGGTGGTGACGGTTAATGATGGT
GATACAGAGGGTCCTCCTAAACAGTCGGAACATTTTCCAAGTACTGTACT
GTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACT
GTACTGTACTGTACTGTACTGTACTGTACTGTACTGTGCCCTGAGGTCAG
AGTATAGAATTTACAGTGACATCTTTGTAACTCTCGACCTTGGGAAGAGA
AAAAAGCTACTTCAATTTCGCACGTGGCGCCTCGATACTACAGTACGGTT
GTATAGTTTTCCCGCAGATAGATCGTCTGTATTCTTGTCCTTTGATACCG
TAGTGCTGCCGTAACACCACCACATGAATAGCTAGGTTATAGATTGTTAT
CGTTTTCATTGGGGTAAGAGTGAATATGTATCCCCAATACGTCGAGACTC
ACAAAATACTAATGAATCTAATTTCAACGAAACACCTCGAGACAATTTCT
ACACCCTTGTGCAGGTAAACCCCAACTGCCGTACACGCCACGTTCCGGAG
GCCCACAGGCCGCCTCCACCAGCGCGGGCGGGGTCGGAAGCGTTCCGTTT
ACACCACCGAGCGTCCGGCGGCTGGGGATACATATACCACCGGTAGGTAC
AGAATCGAAGCGGGTGTAAGGGCGGTGGCGGCGGCAGGGGAGAAGGGCAT
ACTCATTTTTGGAACGCCGAAGTCGTTAGATCAGTGATCCCGGAGGGGGG
GGGGGGGGAGAGAGAACTCGCAGAAGTAAAGTTTATTTCGATAGGGAAAA
TACCGGCACTTGTGCAGGTCATAGCGCACAGTAGTAAGAGGGCAGAACTT
GCGCAGGAAAAGAAGCAGCGATACATATGTCATGTCGCTGGATGTCATAC
TCAGGAAGGTTCTTCTCAGTCTAGCCCCAGTATATGTAAAAAAACGAAAC
TCCTTCATATATCACAAGACGATACGTGCAGCGGTAAGGGAACCCACCAG
TAACATAAAACATCTGCCACAGCTATCGATTTGAAGATTACTGGATACGC
TACTCAATTATCAAGGAAAATTGAGGGGCACTGGACGTGGTAGCTCGTGG
ATGTACACCCCTACCCCCCCCCCCCCCTCCTTGCGAGGTCAATGGTTGAG
AAAATACGGCATGCATTCTCACGAGTACCCCCCCCCCCTTCTCCCCCAGT
TTTAGGATTTACAGACAGCAAGCCGAGTTAAAGTTAGCATGCTTAGCCAG
TATTCCTTCAAGAAGTAAATATCTCTTTCGAAGCAATCCGGGGAAGGAGG
GTGGGGCAGTGTTCGTGCATTTCTTGCCGACGTTCTCTGGCGAGTTGGCT
GTCGACGCAATCGTCCCAGAGATGAAAAAAGCACGTCCCATGAGATGAGC
ACAGAACAACTGTTTTGTAAAAAAAACCCGATAACTATGATAGAGGTGTG
TGTAAAGGCGAGTCATGAGATGAATCAATCGGTTTGAAGCCTGGCCGTAG
AGCAGAAGACCTCACATGATTGACAGCGCAGATGTGAGACTGTATCCTAT
ACCCCCATGTATATACGTTGGGAAACCGACCGCAGGGATGTGAGGATCGC
TTTAGCAGATAGTGCAAAGGTTCTTCAAGAAGTATCAAACCCACTGCAGC
ACAGTAAGACAGATATACGACGAAAATCAATGCTCCCTTCGTCTCACAAG
TCTAGCCGCTTAGCAACGGAGCTCTCTAGCAGGAGCTTTTATGATCATTT
AAACTCCCCTATGCACACAAAAGAAAATCCGGTGCACATCGTGCTTATCT
CAGACCTTGAAATCCGGACCCGTCGACTTCTATTTGAATTTGGGCAAGGT
TTAAGGTTTCTCAACTCGGGACTCCGCTGTACATATCCAACATGTCGGAA
ATAGCGAATATCAGAGACGTTTGAATGATATGCACCTTATCCAGTGAATG
TACATAAAATATTATTACGATATTACCGTGTACAGTTTCATTAGATAAGC
GACAAAGGAGTATATGCCTAATGAGGAAGTTTCTCCTTGTTGACCCTTAA
CTATTAATAGTCATCACCTCGCCCTGCTACCTCCCTATACCCCCTAACCT
CTCTCAATCTCTCTCCATCTTGCGCCGCTCGTCGACGACCCACCTTTGGG
GTTGACGCTCACTCTTCAAACCGAATGCGTTTGTTGTGTCTTGACGTACG
TGAAAACACGCTTACACGCCTTGTTCAAGAGCCCCGAAGCCGCTGGAATG
TTCGGGCTTTCTGCTACTAACGGCATGAAACACGCTTAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig5715:10148..12886+ >mRNA_H-paniculata_contig5715.13267.1 ID=mRNA_H-paniculata_contig5715.13267.1|Name=mRNA_H-paniculata_contig5715.13267.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=624bp|location=Sequence derived from alignment at H-paniculata_contig5715:10148..12886+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAACGGCCAAAACAAATGGGCACATCGAACCAACGACGAGCAGAAAC
TCCTCTGCAGAATCAAGGTCGAGCAGGAACCCCATCAACTCCATTCACCG
CCAGCTCGTCGTCGCCACGATTACATGGAACGGCCAAAACAAATGGGCAC
ATCGAACCAACGACGAGCAGAAACTCCTCTGCAGAATCAAGGTCGAGCAG
GAACCCCATCAACTCCATTCACCGCCAGCTCGTCGTCGCCACGATTACGT
AAACCCCAACTGCCGTACACGCCACGTTCCGGAGGCCCACAGGCCGCCTC
CACCAGCGCGGGCGGGGTCGGAAGCGTTCCGTTTACACCACCGAGCGTCC
GGCGGCTGGGGATACATATACCACCGGTAAACCCCAACTGCCGTACACGC
CACGTTCCGGAGGCCCACAGGCCGCCTCCACCAGCGCGGGCGGGGTCGGA
AGCGTTCCGTTTACACCACCGAGCGTCCGGCGGCTGGGGATACATATACC
ACCGAGCCCCGAAGCCGCTGGAATGTTCGGGCTTTCTGCTACTAACGGCA
TGAAACACGCTTAGAGCCCCGAAGCCGCTGGAATGTTCGGGCTTTCTGCT
ACTAACGGCATGAAACACGCTTAG back to top
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