mRNA_H-paniculata_contig5707.13256.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5707.13256.1 vs. uniprot
Match: D8LRP5_ECTSI (Cilia- and flagella-associated protein 300 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP5_ECTSI) HSP 1 Score: 277 bits (709), Expect = 2.980e-87 Identity = 152/297 (51.18%), Postives = 192/297 (64.65%), Query Frame = 1
Query: 418 ARTYFSFKSVGEASCLSKD-KGLKESLLQWGMSENFSVTQARFSPGFMPHEESSFVRQLLAFYFEQETPQNKAQRNASIESVQWETLSCTATSMDFFDCLFQSGIVSQSGNIRGCYDEVFDGVTVSDKLRELLVNPESENTNLVFSPDQQRELLFHVFKALCVGGAICQPDERLEAYTQATKVLYKDLVSVRKNTASGSVEISPCKVYRVTGI------NGHDQRNQDQSNSIANSE-----------------RHLFLNAK----DPESSYHVCLLVVDLGMKRASVLRKEFVPFW 1224
AR ++ FK E+ D K +KESL QWGM + ++TQ +F P FM HEE++F+RQLL F + P S+ESVQWE L CTA SMDFF+CL GIVS++GN+RGC+ +VFDGVTVSDKLRELLVNP+SEN + FSP QQ ELLFHVF+ L VGG +CQPD+ LE YT+A K LYKDLVSV+KN ++G +EI+ KVYRVT NG+D + ++I++SE F K + S + CL+VVDL KRASVLRKEF+PFW
Sbjct: 15 ARVHYDFKMTRESGDPFFDQKEIKESLRQWGMEDTLTLTQVQFCPTFMVHEETTFLRQLLTFIVD--NPTKPRGTKTSVESVQWERLKCTAMSMDFFNCLIDKGIVSKTGNMRGCFPDVFDGVTVSDKLRELLVNPDSENAD-AFSPAQQEELLFHVFRVLAVGGGVCQPDDSLEPYTKAAKALYKDLVSVQKNASTGKLEIAASKVYRVTEASTANNHNGNDASKNNPESAISSSEGSNGAVVGSDXXXXXXGMSSFWKGKCAPSESSSPHSTCLVVVDLAKKRASVLRKEFLPFW 308
BLAST of mRNA_H-paniculata_contig5707.13256.1 vs. uniprot
Match: A0A6H5JLX0_9PHAE (Cilia- and flagella-associated protein 300 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLX0_9PHAE) HSP 1 Score: 255 bits (651), Expect = 2.650e-78 Identity = 147/316 (46.52%), Postives = 186/316 (58.86%), Query Frame = 1
Query: 418 ARTYFSFKSVGEAS-CLSKDKGLKESLLQWGMSENFSVTQARFSPGFMPHEESSFVRQLLAFYFEQETPQNKAQR----NASIESVQWETLSCTATSMDFFDCLFQSG------------IVSQSGNIRGCYDEVFDGVTVSDKLRELLVNPESENTNLVFSPDQQRELLFHVFKALCVGGAICQPDERLEAYTQATKVLYKDLVSVRKNTASGSVEISPCKVYRVTGI------NGHDQRNQDQSNSIANSERHLFL------------------------NAKDPESSYHVCLLVVDLGMKRASVLRKEFVPFW 1224
AR ++ F+ E+ K +KE+L QWG+ + ++TQ +F P FM HEE++F+RQLL F + S+ESVQWE L CTA SMDFF+CL G IVS+SGNIRGC+ +VFDGVTVSDKLRELLVNP+SEN + FSP QQ ELLFHVF+ L VGG +CQPD+ LE YT+A K LYKDLVSV KN ++G +EI+ KVYRVT N +D R + +I++SE N+ P S+ CL+VVDL KRASVL EF+PFW
Sbjct: 15 ARVHYDFRLTRESGDSFFGQKDIKENLRQWGIEDTLTLTQVQFCPTFMVHEETTFLRQLLTFIVDNPAKPRMEHMMRSTKTSVESVQWERLKCTAMSMDFFNCLIDKGDKEEESKYQGERIVSKSGNIRGCFPDVFDGVTVSDKLRELLVNPDSENAD-AFSPAQQEELLFHVFRVLAVGGGVCQPDDSLEPYTKAAKALYKDLVSVHKNASTGKLEIAASKVYRVTEASTVTNHNDNDARKTNPEGAISSSEGXXXXXXXXXXXXXXXXXXXXXXXXCAPSNSSSPHST---CLVVVDLAKKRASVLWNEFLPFW 326
BLAST of mRNA_H-paniculata_contig5707.13256.1 vs. uniprot
Match: A0A8K1FJ99_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJ99_PYTOL) HSP 1 Score: 138 bits (347), Expect = 2.770e-34 Identity = 87/266 (32.71%), Postives = 135/266 (50.75%), Query Frame = 1
Query: 433 SFKSVGEASCLSKDKGLKESLLQWGMSENFSVTQARFSPGFMPHEESSFVRQLLAFYFEQETPQN-KAQRNA-SIESVQWETLSCTATSMDFFDCLFQSGIVSQSGNIRGCYDEVFDGVTVSDKLRELLVNPESENTNLVFSPDQQRELLFHVFKALCVGGAICQPDERLEAYTQATKVLYKDLVSVRKNTASGSVEISPCKVYRVTGINGHDQRNQDQSNSIANSERHLFLNAKDPESSYHVCLLVVDLGMKRASVLRKEFVPFW 1224
SF+ + + L + K+ LLQW + + + + + E ++ AF+ + + K R +I + L CT TS+ FFD L +G+V+ SG++R C DEV+DG T D ++E L+NP+SEN + VFS ++Q E +F +F+AL +GG++CQ D+ + Y TK YK LVSV+KNTA + VY V +D + LF + S +H C +V D + +V R F PFW
Sbjct: 19 SFEYIEKGFPLLQSTDAKQKLLQWNLDRSLQIFRFCVNKKITKETEEETIQ---AFFRDPNVQSHLKLPRQLDNIRDLHCRRLRCTITSLSFFDKLVDAGLVASSGSLRRCMDEVYDGATAGDLVKEALINPDSENAD-VFSEEEQNEFIFQIFRALVLGGSMCQSDDNIAPYESMTKQFYKSLVSVKKNTADPTAIDITSHVYVV----------EDDA---------LFASP----SPFHTCFVVFDPKKRWLTVWRHAFEPFW 257
BLAST of mRNA_H-paniculata_contig5707.13256.1 vs. uniprot
Match: A0A6G0X974_9STRA (Cilia- and flagella-associated protein 300 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X974_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.020e-33 Identity = 98/256 (38.28%), Postives = 139/256 (54.30%), Query Frame = 1
Query: 481 LKESLLQWGMSENFSVTQARFSPGFMPHEESSFVRQLLAFYFEQETPQNKAQ------RNASIESVQWETLSCTATSMDFFDCLFQSG-IVSQSGNIRGCYDEVFDGVTVSDKLRELLVNPESENTNLVFSPDQQRELLFHVFKALCVGGAICQPDERLEAYTQATKVLYKDLVSVRKNTASGSVEI-SPCKVYRVTGINGHDQRNQDQSNSIANSERHLFLNAKDPESSYHVCLLVVDLGMKRASVLRKEFVPFW 1224
+K LQW + ++ V + R F P +E+SF+R AF+ E+P+ +A+ SIES+ + L + SM FF+ L + IVS+SG IR CYD+V++ TVSD LR+++VNP+SE+ +L FS +Q E +F +FK L +GGA+ QPD+ LE Y TK +YK LVSVRK S ++++ SP VY T D NQ Q F P ++ C L VD FVPFW
Sbjct: 27 MKLKFLQWNLDQHGRVKRFRVRGKFDPADETSFLR---AFF---ESPEVRAELPFPSSMPPSIESMSFRKLKTSVLSMAFFEKLEDNPQIVSKSGYIRKCYDDVYNDCTVSDCLRDMVVNPDSEHASL-FSSAEQDEAVFQIFKRLVIGGAMSQPDDNLEPYLSMTKQVYKALVSVRKEADSKALQVYSP--VYIFTD---DDSSNQPQ-----------FFPTSSP---FNACFLAVDPKKHAVLCWYAPFVPFW 256
BLAST of mRNA_H-paniculata_contig5707.13256.1 vs. uniprot
Match: A0A1V9Y765_9STRA (Cilia- and flagella-associated protein 300 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y765_9STRA) HSP 1 Score: 132 bits (333), Expect = 2.380e-32 Identity = 86/255 (33.73%), Postives = 140/255 (54.90%), Query Frame = 1
Query: 481 LKESLLQWGMSENFSVTQARFSPGFMPHEESSFVRQLLAFYFEQETPQNKAQRN------ASIESVQWETLSCTATSMDFFDCLF-QSGIVSQSGNIRGCYDEVFDGVTVSDKLRELLVNPESENTNLVFSPDQQRELLFHVFKALCVGGAICQPDERLEAYTQATKVLYKDLVSVRKNTASGSVEISPCKVYRVTGINGHDQRNQDQSNSIANSERHLFLNAKDPESSYHVCLLVVDLGMKRASVLRKEFVPFW 1224
+K L+QW + ++ V + R S F P++E +F+R E+P +A + +S++ ++++ L + TS+ FFD L +S +VS G +R C DEV+D TVS+ LRE++ NPESE +L F+PD+Q+EL++ +FK L +GGA+CQPD++LE Y + TK +YK L +VRK + P +VY + N++ + KD S ++ ++ VD + FVPFW
Sbjct: 21 VKLKLMQWNLDQHSVVKRFRISCRFDPNDEITFLRSFF------ESPVVRAHISLPSTLGSSLDMLEFQRLRTSITSLSFFDKLENESDLVSTGGYLRKCMDEVYDHCTVSECLREMMANPESEYCHL-FTPDEQKELIYQIFKRLVIGGAMCQPDDKLEPYLEITKRIYKALAAVRKLPDAQP----PLEVYSYAYL------------LTCNAKGNFGFFPKD--SPFNSLIVAVDPKKQSVQCWYCPFVPFW 250
BLAST of mRNA_H-paniculata_contig5707.13256.1 vs. uniprot
Match: A0A485KJB2_9STRA (Cilia- and flagella-associated protein 300 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJB2_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.050e-31 Identity = 89/258 (34.50%), Postives = 134/258 (51.94%), Query Frame = 1
Query: 481 LKESLLQWGMSENFSVTQARFSPGFMPHEESSFVRQLLAFYFEQETPQNKAQRNA---------SIESVQWETLSCTATSMDFFDCLFQSG-IVSQSGNIRGCYDEVFDGVTVSDKLRELLVNPESENTNLVFSPDQQRELLFHVFKALCVGGAICQPDERLEAYTQATKVLYKDLVSVRKNTASGSVEISPCKVYRVTGINGHDQRNQDQSNSIANSERHLFLNAKDPESSYHVCLLVVDLGMKRASVLRKEFVPFW 1224
+K L+QW + ++ V + R F P ++++F+R AF+ ++KA R A S++++ + L + +M FFD L Q G IVS+ G +R C D+V+D TV+D LR++LVNP+S++ +L FSP +Q E +F +FK L +GGA+CQPD+ L Y TK +YK LVSVRK + E KVY + D + LF S ++ C + VD FVPFW
Sbjct: 32 VKLKLMQWNLDQHGGVKRFRVQGRFDPADDAAFLR---AFF------ESKAVRAALPFPATMPGSLDTLPFSRLKTSVVNMSFFDKLEQCGDIVSKGGYLRKCLDDVYDDCTVNDCLRDMLVNPDSDHADL-FSPHEQNEGIFQIFKRLVIGGAMCQPDDMLSEYLAMTKRIYKGLVSVRK-----AHETHDVKVYSPLYLVHDDDDCMSNQSEREGGAVPLFRK----RSRFNACFVAVDPKKHAVICWYAPFVPFW 270
BLAST of mRNA_H-paniculata_contig5707.13256.1 vs. uniprot
Match: G4YWF9_PHYSP (Cilia- and flagella-associated protein 300 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YWF9_PHYSP) HSP 1 Score: 130 bits (326), Expect = 3.910e-31 Identity = 92/272 (33.82%), Postives = 145/272 (53.31%), Query Frame = 1
Query: 436 FKSVGEASCLSKDKGLKESLLQWGMSENFSVTQARFSPGFMPHEESSFVRQLLAFYFEQETPQN----KAQRNASIESVQWETLSCTATSMDFFDCLFQSGIVSQSGNIRGCYDEVFDGVTVSDKLRELLVNPESENTNLVFSPDQQRELLFHVFKALCVGG-AICQPDERLEAYTQATKVLYKDLVSVRKNTASGS----VEISPCKVYRVTGINGHDQRNQDQSNSIANSERHLFLNAKDPESSYHVCLLVVDLGMKRASVLRKEFVPFW 1224
F+ + +A +D +++ LLQW +S++ + + R +P+E LL +F+ E+ ++ S+++E L + TSM FF+ L +GIVS+ G+IRGC DE FDG T D L E+L NP+S+N + VFS D++ E +F +F AL VGG A+ Q D R+EAY AT+ LY+ L+SV+K+ A + +EI+ +VYRV+G LF + P S +H C ++D + +V F W
Sbjct: 27 FEHLPDALPALRDFEIRQKLLQWNLSDSLQLQRFRVHRR-LPNEADEA---LLTEFFQDESVHRILLVRSPPPLLNSSLRFERLRVSVTSMAFFEKLNAAGIVSRDGSIRGCIDEDFDGCTAGDLLTEMLANPDSDNCD-VFSDDERLEFIFQLFSALVVGGGALRQADSRVEAYEDATRTLYRALISVKKSIADANRKRDIEITS-RVYRVSGDA-------------------LF---QAPSSRFHSCFAIIDARKRWLTVWYCPFRASW 270
BLAST of mRNA_H-paniculata_contig5707.13256.1 vs. uniprot
Match: A0A067CJ50_SAPPC (Cilia- and flagella-associated protein 300 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJ50_SAPPC) HSP 1 Score: 128 bits (322), Expect = 9.860e-31 Identity = 83/249 (33.33%), Postives = 132/249 (53.01%), Query Frame = 1
Query: 481 LKESLLQWGMSENFSVTQARFSPGFMPHEESSFVRQLLAFYFEQETPQNKAQRNASIESVQWETLSCTATSMDFFDCLF-QSGIVSQSGNIRGCYDEVFDGVTVSDKLRELLVNPESENTNLVFSPDQQRELLFHVFKALCVGGAICQPDERLEAYTQATKVLYKDLVSVRKNTASGSVEISPCKVYRVTGINGHDQRNQDQSNSIANSERHLFLNAKDPESSYHVCLLVVDLGMKRASVLRKEFVPFW 1224
+K L+QW + E+ V + R S F P+++++F+R ++ A +++ + +E L+ T TS+ FFD L + G+VS G +R C DEV++ TVSD +RE++ N +SE+ +L F+ +QREL+F +FK L +GGA+CQ DE L+ Y TK +YK L +VRK G S VY T D+S + + LF S ++ C + +D + +VPFW
Sbjct: 26 VKVKLMQWNLDEHGRVGRFRPSCPFDPNDDAAFLRCFFESPVVRDHLTVPASTPTTLDGLSFERLATTVTSLAFFDKLADEPGLVSSGGYLRKCLDEVYEHCTVSDSVREMMANCDSEHAHL-FTAAEQRELIFQIFKRLVIGGAMCQSDETLQPYLDVTKAIYKALAAVRKGPQGGVHVYS--HVYLFT----------DESTRKSGT---LF----QKPSPFNACFVAIDPKKQAVQCWYVPYVPFW 254
BLAST of mRNA_H-paniculata_contig5707.13256.1 vs. uniprot
Match: K3WZF8_GLOUD (Cilia- and flagella-associated protein 300 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZF8_GLOUD) HSP 1 Score: 127 bits (319), Expect = 5.500e-30 Identity = 88/276 (31.88%), Postives = 129/276 (46.74%), Query Frame = 1
Query: 436 FKSVGEASCLSKDKGLKESLLQWGMSENFSVTQARFSPGFMPHEESSFVRQLLAFYFEQETPQNKAQRNASI-----ESVQWETLSCTATSMDFFDCLFQSGIVSQSGNIRGCYDEVFDGVTVSDKLRELLVNPESE--------NTNLVFSPDQQRELLFHVFKALCVGGAICQPDERLEAYTQATKVLYKDLVSVRKNTASGSVEISPCKVYRVTGINGHDQRNQDQSNSIANSERHLFLNAKDPESSYHVCLLVVDLGMKRASVLRKEFVPFW 1224
F+ + + + KD +K LLQW ++E + + R P E V Q Q T ++S + +Q L TATS+ FFD L +G+VS SG +R C DEV+DG T SD L+E V+ E+E N N Q+E +F +F+AL +GGA+CQ DE ++ Y + VLYK LVSV+K+ + V +VY V D R S +A + C +++D + +V R F PFW
Sbjct: 31 FELIPDGVPVLKDSEVKHKLLQWNLNETLQLQRFRVKAKITPDVEEELVTQFFHNAHVQSTLSLPEALSSSAFKDAPQRIQCRKLRATATSLSFFDRLVPAGLVSGSGALRRCLDEVYDGATASDLLKEAFVSAEAEENLLEGSNNANWFSLEQDQQEFIFQLFRALVIGGAMCQSDESVQPYERMVSVLYKALVSVKKHASDSLVIDVTSRVYAV-----EDTRVLPAS-CVAR---------------FSTCFVILDPRKRWLTVWRHPFQPFW 285
BLAST of mRNA_H-paniculata_contig5707.13256.1 vs. uniprot
Match: A0A1V9Z4A1_9STRA (Cilia- and flagella-associated protein 300 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4A1_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.540e-29 Identity = 91/256 (35.55%), Postives = 134/256 (52.34%), Query Frame = 1
Query: 481 LKESLLQWGMSENFSVTQARFSPGFMPHEESSFVRQLLAFYFEQETPQNKAQ------RNASIESVQWETLSCTATSMDFFDCLF-QSGIVSQSGNIRGCYDEVFDGVTVSDKLRELLVNPESENTNLVFSPDQQRELLFHVFKALCVGGAICQPDERLEAYTQATKVLYKDLVSVRKNTASGSVEISPCKVYRVTGINGHDQRNQDQSNSIANSERHLFLNAKDPESS-YHVCLLVVDLGMKRASVLRKEFVPFW 1224
+K L+QW + E+ +V + R S F +E++F+R F+ E+P +A S++ + +E L TSM FFD L + +VS G +R C DEV+D TVSD +RE+LVNP+S++ + VFS Q EL+F +FK L GGA+CQ DE L Y TK +YK L +VRK A +E+ VY VT N ++ LF P++S ++ C + VD + +VPFW
Sbjct: 26 VKLKLMQWNLDEHGAVRRFRLSCKFDVADEAAFLR---CFF---ESPNVRAHVPLPPTAPTSLDRLVFERLRTNVTSMSFFDKLENEPDLVSNGGYLRKCIDEVYDHCTVSDTVREMLVNPDSDHAD-VFSKADQAELIFQIFKRLATGGAMCQSDETLAPYLDTTKRIYKALAAVRK--APHGLEVYSY-VYLVTAPN-------------KSTNAGLF-----PKTSPFNACFVAVDPKKQAVQCWYAPYVPFW 253 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5707.13256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5707.13256.1 >prot_H-paniculata_contig5707.13256.1 ID=prot_H-paniculata_contig5707.13256.1|Name=mRNA_H-paniculata_contig5707.13256.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=299bp MEVELRAGGAGGNVVKDLALTQEGGSEAVARTYFSFKSVGEASCLSKDKGback to top mRNA from alignment at H-paniculata_contig5707:6093..10865- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5707.13256.1 ID=mRNA_H-paniculata_contig5707.13256.1|Name=mRNA_H-paniculata_contig5707.13256.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4773bp|location=Sequence derived from alignment at H-paniculata_contig5707:6093..10865- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5707:6093..10865- >mRNA_H-paniculata_contig5707.13256.1 ID=mRNA_H-paniculata_contig5707.13256.1|Name=mRNA_H-paniculata_contig5707.13256.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1794bp|location=Sequence derived from alignment at H-paniculata_contig5707:6093..10865- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |