prot_H-paniculata_contig57057.13255.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig57057.13255.1
Unique Nameprot_H-paniculata_contig57057.13255.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length39
Homology
BLAST of mRNA_H-paniculata_contig57057.13255.1 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 6.010e-14
Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 0
Query:    1 AARRAAGAVTHAVDRVVTGKNRNAFCAVRPPGHHAGPSG 39
            AARRAAGAVTHAVDRV+ GKNRNAFCAVRPPGHHAG +G
Sbjct: 1822 AARRAAGAVTHAVDRVLAGKNRNAFCAVRPPGHHAGANG 1860          
BLAST of mRNA_H-paniculata_contig57057.13255.1 vs. uniprot
Match: D8LG61_ECTSI (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG61_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 6.070e-14
Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 0
Query:    1 AARRAAGAVTHAVDRVVTGKNRNAFCAVRPPGHHAGPSG 39
            AARRAAGAVTHAVDRV+ GKNRNAFCAVRPPGHHAG +G
Sbjct:  198 AARRAAGAVTHAVDRVLAGKNRNAFCAVRPPGHHAGANG 236          
BLAST of mRNA_H-paniculata_contig57057.13255.1 vs. uniprot
Match: A0A7S2EL93_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EL93_TRICV)

HSP 1 Score: 64.3 bits (155), Expect = 3.920e-12
Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    1 AARRAAGAVTHAVDRVVTGKNRNAFCAVRPPGHHAGPSG 39
            AARRAAGAV HAVD V+ G+NRNAFC VRPPGHHAG +G
Sbjct:   70 AARRAAGAVQHAVDCVLVGRNRNAFCVVRPPGHHAGVNG 108          
BLAST of mRNA_H-paniculata_contig57057.13255.1 vs. uniprot
Match: A0A7S1YY16_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YY16_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 4.760e-12
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    1 AARRAAGAVTHAVDRVVTGKNRNAFCAVRPPGHHAGPSG 39
            AARRAAGAV HAVDRV+ G+NRNAFC VRPPGHHAG +G
Sbjct:   22 AARRAAGAVQHAVDRVLVGRNRNAFCVVRPPGHHAGVNG 60          
BLAST of mRNA_H-paniculata_contig57057.13255.1 vs. uniprot
Match: A0A7S4RBR2_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RBR2_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 4.760e-12
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    1 AARRAAGAVTHAVDRVVTGKNRNAFCAVRPPGHHAGPSG 39
            AARRAAGAV HAVDRV+ G+NRNAFC VRPPGHHAG +G
Sbjct: 1035 AARRAAGAVQHAVDRVLVGRNRNAFCVVRPPGHHAGVNG 1073          
BLAST of mRNA_H-paniculata_contig57057.13255.1 vs. uniprot
Match: A0A835YI51_9STRA (Histone deacetylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI51_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 6.140e-12
Identity = 33/39 (84.62%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    1 AARRAAGAVTHAVDRVVTGKNRNAFCAVRPPGHHAGPSG 39
            AARRAAGAVT AVD VV+G+ RNAFCAVRPPGHHAGP+G
Sbjct:   26 AARRAAGAVTAAVDAVVSGRYRNAFCAVRPPGHHAGPNG 64          
BLAST of mRNA_H-paniculata_contig57057.13255.1 vs. uniprot
Match: A0A7S4K701_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K701_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 6.540e-12
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    1 AARRAAGAVTHAVDRVVTGKNRNAFCAVRPPGHHAGPSG 39
            AARRAAGAV HAVDRV+ G+NRNAFC VRPPGHHAG +G
Sbjct:   66 AARRAAGAVQHAVDRVLIGRNRNAFCVVRPPGHHAGVNG 104          
BLAST of mRNA_H-paniculata_contig57057.13255.1 vs. uniprot
Match: A0A8J9SU04_PHATR (Hypothetical protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SU04_PHATR)

HSP 1 Score: 64.7 bits (156), Expect = 1.010e-11
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    1 AARRAAGAVTHAVDRVVTGKNRNAFCAVRPPGHHAGPSG 39
            AA RAAG+V  AVD+V+ G+NRNAFCAVRPPGHHAGP+G
Sbjct:   14 AAMRAAGSVCQAVDQVIAGENRNAFCAVRPPGHHAGPTG 52          
BLAST of mRNA_H-paniculata_contig57057.13255.1 vs. uniprot
Match: A0A482S2X6_9ARCH (Hist_deacetyl domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2X6_9ARCH)

HSP 1 Score: 64.7 bits (156), Expect = 3.370e-11
Identity = 32/39 (82.05%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    1 AARRAAGAVTHAVDRVVTGKNRNAFCAVRPPGHHAGPSG 39
            AARRAAGAV  AVDRV+ G+NRNAFC VRPPGHHAG SG
Sbjct:  206 AARRAAGAVAFAVDRVLLGRNRNAFCVVRPPGHHAGYSG 244          
BLAST of mRNA_H-paniculata_contig57057.13255.1 vs. uniprot
Match: A0A6S8HTR1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8HTR1_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 5.800e-11
Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    1 AARRAAGAVTHAVDRVVTGKNRNAFCAVRPPGHHAGPSG 39
            AARRAAGAV HAVD V+ G+NRNAFC VRPPGHHAG +G
Sbjct:  790 AARRAAGAVQHAVDCVLVGRNRNAFCVVRPPGHHAGVNG 828          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig57057.13255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG60_ECTSI6.010e-1489.74Histone deactylase of possible bacterial origin wi... [more]
D8LG61_ECTSI6.070e-1489.74Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
A0A7S2EL93_TRICV3.920e-1279.49Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S1YY16_9STRA4.760e-1282.05Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4RBR2_9STRA4.760e-1282.05Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A835YI51_9STRA6.140e-1284.62Histone deacetylase domain-containing protein n=1 ... [more]
A0A7S4K701_9STRA6.540e-1282.05Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A8J9SU04_PHATR1.010e-1176.92Hypothetical protein (Fragment) n=3 Tax=Phaeodacty... [more]
A0A482S2X6_9ARCH3.370e-1182.05Hist_deacetyl domain-containing protein (Fragment)... [more]
A0A6S8HTR1_9STRA5.800e-1179.49Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 1..36
e-value: 5.4E-9
score: 35.9
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20coord: 1..39
e-value: 1.0E-14
score: 56.3
NoneNo IPR availablePANTHERPTHR45634:SF15coord: 1..36
NoneNo IPR availablePANTHERPTHR45634FAMILY NOT NAMEDcoord: 1..36
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 1..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig57057contigH-paniculata_contig57057:256..372 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig57057.13255.1mRNA_H-paniculata_contig57057.13255.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig57057 256..372 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig57057.13255.1 ID=prot_H-paniculata_contig57057.13255.1|Name=mRNA_H-paniculata_contig57057.13255.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=39bp
AARRAAGAVTHAVDRVVTGKNRNAFCAVRPPGHHAGPSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023801His_deacetylse_dom
IPR037138His_deacetylse_dom_sf
IPR023696Ureohydrolase_dom_sf