mRNA_H-paniculata_contig57026.13252.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig57026.13252.1 vs. uniprot
Match: UPI001E1BB053 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BB053) HSP 1 Score: 94.4 bits (233), Expect = 6.690e-20 Identity = 75/225 (33.33%), Postives = 116/225 (51.56%), Query Frame = 1
Query: 1 MQRVCYRELAGALMWLTTMTRPDIANSVRTVGKLCENPGMQQKKAVEKICSTCSECQTRKSSTTDNRITGTRWWHSPTRTTLPGHQAV----------SIRGGAVKLDRDAISRLSCTRETTSSSNLKSEYVALWKIVKELIFLRQVQAFMMLTIEDYPIVIKEDNEAAIKMATKKHRSRRTRHIDVEHHVVRDAVEAGKVRIEYVETKYQHADVLIKPLERNLF 645
M+++ YRE G LM+LT ++RPDIA +V + CENPG + V++I + S TRK + S +R L G S+ G + ++ S + T+ S ++EYVA + KE I+LR + + L ++ P+ I DN+ AI++ RT+HID+ +H +RD +E+ K+ I Y+ETK Q AD+L KPL LF
Sbjct: 32 MRKIPYREAVGCLMYLTIVSRPDIAFAVGQESRYCENPGPAHWETVKRILAYISS--TRKQGL----------FFSGSRQPLNGFSDADYGGYLDHRRSMTGYIFNHNGGPVAWCSRRKTCTTLSTTEAEYVAASETSKEAIWLRHLLQNIDLAKQN-PVKIHCDNQRAIQLVRNPVFHGRTKHIDIRYHFIRDQLESNKIDIIYIETKMQIADILTKPLATPLF 243
BLAST of mRNA_H-paniculata_contig57026.13252.1 vs. uniprot
Match: A0A182H646_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H646_AEDAL) HSP 1 Score: 94.4 bits (233), Expect = 1.160e-19 Identity = 74/212 (34.91%), Postives = 111/212 (52.36%), Query Frame = 1
Query: 16 YRELAGALMWLTTMTRPDIANSVRTVGKLCENPGMQQ----KKAVEKICSTCSECQTRKSSTTDNRITG--TRWWHSPTRTTLPGHQAVSIRGGAVKLDRDAISRLSCTRETTSSSNLKSEYVALWKIVKELIFLRQVQAFMMLTIEDYPIVIKEDNEAAIKMATKKHRSRRTRHIDVEHHVVRDAVEAGKVRIEYVETKYQHADVLIKPLE 633
YREL G+LM++ TRPDI SV +G+ + P Q K+ V I T + C K + + G W S S+ G A + + +S S + T ++S+ ++EY+AL V E ++L + + L P++I EDN+ I MA K S+R++HIDV+HH VRD + G VRIEYV T+ Q AD+ KP++
Sbjct: 71 YRELLGSLMYVMLCTRPDICYSVGFLGRFQQKPTTQHWQSLKRVVRFIKGTKARCLEYKQVRSAKPLVGYVDADWASDI------EDRKSVSGFAFFVFGNLVSWSSKKQTTVATSSSEAEYIALSSAVSEAVWLSGILDDLKLK-NSSPVIIYEDNQGCIGMA-KNCESKRSKHIDVKHHFVRDHISNGNVRIEYVRTEDQLADLFTKPMD 274
BLAST of mRNA_H-paniculata_contig57026.13252.1 vs. uniprot
Match: A0A6H5KPN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN5_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 7.040e-19 Identity = 66/206 (32.04%), Postives = 103/206 (50.00%), Query Frame = 1
Query: 19 RELAGALMWLTTMTRPDIANSVRTVGKLCENPGMQQKKAVEKICSTCSECQTRKSSTTDNRITGTRWWHSPTRTTLPGHQAVSIRGGAVKLDRDAISRLSCTRETTSSSNLKSEYVALWKIVKELIFLRQVQAFMMLTIEDYPIVIKEDNEAAIKMATKKHRSRRTRHIDVEHHVVRDAVEAGKVRIEYVETKYQHADVLIKPLER 636
RE G++MW++T +RPD++ +VR V + P + A++KI TR T R +G + S+ G A + +S S T+ S S ++EY+A VKE +F+R VQ+F++ I + EDN+ AI + S RT+HIDV H +R +G + +++V T QHAD+L K L R
Sbjct: 40 REAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKG--TRDLGITYQRGSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSATEAEYIAAEDGVKEALFVRAVQSFVVPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRFHFIRGLFRSGDISVKFVPTTEQHADLLTKALSR 243
BLAST of mRNA_H-paniculata_contig57026.13252.1 vs. uniprot
Match: A0A0C3AUA9_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AUA9_9AGAM) HSP 1 Score: 92.0 bits (227), Expect = 1.030e-18 Identity = 71/229 (31.00%), Postives = 112/229 (48.91%), Query Frame = 1
Query: 1 MQRVCYRELAGALMWLTTMTRPDIANSVRTVGKLCENPGMQQKKAVEKICSTCSECQTRKSSTTDNRITGTRWWHSPTRTTLPG---------------HQAVSIRGGAVKL-DRDAISRLSCTRETTSSSNLKSEYVALWKIVKELIFLRQVQAFMMLTIEDYPIVIKEDNEAAIKMATKKHRSRRTRHIDVEHHVVRDAVEAGKVRIEYVETKYQHADVLIKPLERN 639
M V YREL G+LM+L TRPDI+ V + K NPG +A +++ + G+R W + TL G H GG V L R A+S S + T + S+L++EY+AL + KE I+++ A + + + P+ + DN+ ++ +A RT+HID++HH +RD V +G + ++Y+ T AD L KPL R+
Sbjct: 83 MANVPYRELVGSLMYLRVATRPDISYHVSVLSKFLNNPGRAHWEAAKRVL---------------RFLKGSRDW----KLTLGGFSDLVAYSDADWAGDHDDRKSTGGYVFLVGRGAVSWSSKRQPTVALSSLEAEYMALTQAAKEAIWIKSYLADIDVHVHG-PVTVFGDNQGSLALAKNPVFHARTKHIDIQHHFIRDCVASGTIFVDYISTHDMLADGLTKPLSRD 291
BLAST of mRNA_H-paniculata_contig57026.13252.1 vs. uniprot
Match: A0A182GHD8_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GHD8_AEDAL) HSP 1 Score: 93.2 bits (230), Expect = 1.110e-18 Identity = 74/212 (34.91%), Postives = 110/212 (51.89%), Query Frame = 1
Query: 16 YRELAGALMWLTTMTRPDIANSVRTVGKLCENPGMQQ----KKAVEKICSTCSECQTRKSSTTDNRITG--TRWWHSPTRTTLPGHQAVSIRGGAVKLDRDAISRLSCTRETTSSSNLKSEYVALWKIVKELIFLRQVQAFMMLTIEDYPIVIKEDNEAAIKMATKKHRSRRTRHIDVEHHVVRDAVEAGKVRIEYVETKYQHADVLIKPLE 633
YREL G+LM++ TRPDI SV +G+ + P Q K+ V I T + C K + + G W S S+ G A + + +S S + T ++S+ ++EY+AL V E ++L + + L P+ I EDN+ I MA K S+R++HIDV+HH VRD + G VRIEYV T+ Q AD+ KP++
Sbjct: 179 YRELLGSLMYVMLCTRPDICYSVGFLGRFQQKPTTQHWQSLKRVVRFIKGTKARCLEYKQVRSAKPLVGYVDADWASDI------EDRKSVSGFAFFVFGNLVSWSSKKQTTVATSSSEAEYIALSSAVSEAVWLSGILDDLKLK-NSSPVTIYEDNQGCIGMA-KNCESKRSKHIDVKHHFVRDHISNGNVRIEYVRTEDQLADLFTKPMD 382
BLAST of mRNA_H-paniculata_contig57026.13252.1 vs. uniprot
Match: A0A6A3GRJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GRJ1_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 3.090e-18 Identity = 71/216 (32.87%), Postives = 107/216 (49.54%), Query Frame = 1
Query: 16 YRELAGALMWLTTMTRPDIANSVRTVGKLCENPGMQQKKAVEKICSTCSECQTRKSSTTDNRITGTRWWHSPTRT-TLPGHQAV----------SIRGGAVKLDRDAISRLSCTRETTSSSNLKSEYVALWKIVKELIFLRQVQAFMMLTIEDYPIVIKEDNEAAIKMATKKHRSRRTRHIDVEHHVVRDAVEAGKVRIEYVETKYQHADVLIKPL 630
YR L G L+++TT TRPDIA V + + ENPG Q A ++ ST + I +H T T TL + S+ G V + S + T + S+ ++EY+AL V+E+++ R + M T++ I EDN+ AI + RT+H+D+ HH +R+ VE G V++EYV+TK Q AD+L K L
Sbjct: 6 YRSLIGCLLYITTCTRPDIAFVVTQLSRFLENPGQQHWNAAVRVLRYLK-------STRQHGII----YHGGTHTVTLKAYSDADWGTSLDDRRSVSGVMVMTGNAPVVFKSKFQRTGALSSAEAEYMALSLCVQEVLWTRAMLTVMG-TLQRNATTIWEDNQGAIALVHNAGYHARTKHVDIRHHFIRENVERGTVKVEYVDTKNQLADILTKAL 209
BLAST of mRNA_H-paniculata_contig57026.13252.1 vs. uniprot
Match: A0A6A3HFF3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HFF3_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.010e-17 Identity = 71/216 (32.87%), Postives = 107/216 (49.54%), Query Frame = 1
Query: 16 YRELAGALMWLTTMTRPDIANSVRTVGKLCENPGMQQKKAVEKICSTCSECQTRKSSTTDNRITGTRWWHSPTRT-TLPGHQAV----------SIRGGAVKLDRDAISRLSCTRETTSSSNLKSEYVALWKIVKELIFLRQVQAFMMLTIEDYPIVIKEDNEAAIKMATKKHRSRRTRHIDVEHHVVRDAVEAGKVRIEYVETKYQHADVLIKPL 630
YR L G L+++TT TRPDIA V + + ENPG Q A ++ ST + I +H T T TL + S+ G V + S + T + S+ ++EY+AL V+E+++ R + M T++ I EDN+ AI + RT+H+D+ HH +R+ VE G V++EYV+TK Q AD+L K L
Sbjct: 77 YRSLIGCLLYITTCTRPDIAFVVTQLSRFLENPGQQHWNAAVRVLRYLK-------STRQHGII----YHGGTHTVTLKAYSDADWGTSLDDRRSVSGVMVMTGNAPVVFKSKFQRTGALSSAEAEYMALSLCVQEVLWTRAMLTVMG-TLQRNATTIWEDNQGAIALVHNAGYHARTKHVDIRHHFIRENVERGTVKVEYVDTKNQLADILTKAL 280
BLAST of mRNA_H-paniculata_contig57026.13252.1 vs. uniprot
Match: A0A8J6HJQ3_TENMO (Integrase catalytic domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HJQ3_TENMO) HSP 1 Score: 91.3 bits (225), Expect = 1.160e-17 Identity = 65/211 (30.81%), Postives = 114/211 (54.03%), Query Frame = 1
Query: 16 YRELAGALMWLTTMTRPDIANSVRTVGKLCENPGMQQKKAVEKICSTCSECQTRK---SSTTDNRITG---TRWWHSPTRTTLPGHQAVSIRGGAVKLDRDAISRLSCTRETTSSSNLKSEYVALWKIVKELIFLRQVQAFMMLTIEDYPIVIKEDNEAAIKMATKKHRSRRTRHIDVEHHVVRDAVEAGKVRIEYVETKYQHADVLIKPL 630
YRE G L+++T ++RPDIA++V + + +NP + +AV++I + K SS +N IT W ++ +S G + +R+ +S S + T + S ++EY+AL +ELI+LR + + + T + P + DN+ A+ +A+ S+RT+HID+ HH +R VE K++++ + T+ AD L KPL
Sbjct: 709 YREAIGGLLYITQISRPDIAHAVNYLSRFNQNPDIVHWRAVKRILRYLKSTISLKMEFSSLEENTITAYCDADWGNNLA-------DRISTTGFIIFHNRNPVSWSSKKQPTVALSTTEAEYMALSYTCEELIWLRSLASELDPTSVEEPTTLYNDNKGAVDLASDAGFSQRTKHIDLRHHFIRQLVEDAKIKVKLISTQDMIADALTKPL 912
BLAST of mRNA_H-paniculata_contig57026.13252.1 vs. uniprot
Match: A0A6A3JPU3_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JPU3_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.510e-17 Identity = 72/215 (33.49%), Postives = 109/215 (50.70%), Query Frame = 1
Query: 13 CYRELAGALMWLTTMTRPDIANSVRTVGKLCENPGMQQKKAVEKICSTCSECQTRKSSTTDNRITGTRWWHSPTR---------TTLPGHQAVSIRGGAVKLDRDAISRLSCTRETTSSSNLKSEYVALWKIVKELIFLRQVQAFMMLTIEDYPIVIKEDNEAAIKMATKKHRSRRTRHIDVEHHVVRDAVEAGKVRIEYVETKYQHADVLIKPL 630
C R L G L+++TT TRPDIA V + + ENPG Q A ++ ST + I HS T T L ++VS G V + + S + T + S+ ++EY+AL V+E+++ R + M T++ I EDN+ AI +A RT+H+D+ HH +R+ V+ G V++EYV+TK Q AD+L K L
Sbjct: 553 CGRNLIGCLLYITTCTRPDIAFVVTQLSRFLENPGQQHWNAAVRVLRYLK-------STRQHGIIYQGGTHSVTLKAYSDADWGTNLDDRRSVS--GVMVMIGNAPVVFKSKFQRTVALSSAEAEYMALSLCVQEVLWTRAMLTDMG-TLQRNATTIWEDNQGAIALAQNAGYHARTKHVDIRHHFIRENVKRGTVKVEYVDTKNQLADILTKAL 757
BLAST of mRNA_H-paniculata_contig57026.13252.1 vs. uniprot
Match: A0A6A3JJ87_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3JJ87_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.000e-17 Identity = 72/214 (33.64%), Postives = 107/214 (50.00%), Query Frame = 1
Query: 16 YRELAGALMWLTTMTRPDIANSVRTVGKLCENPGMQQKKAVEKICSTCSECQTRKSSTTDNRITGTRWWHSPTR---------TTLPGHQAVSIRGGAVKLDRDAISRLSCTRETTSSSNLKSEYVALWKIVKELIFLRQVQAFMMLTIEDYPIVIKEDNEAAIKMATKKHRSRRTRHIDVEHHVVRDAVEAGKVRIEYVETKYQHADVLIKPL 630
YR L G L+++TT TRPDIA V + + ENPG Q A ++ ST + I HS T T L + VS G V + + S + T + S+ ++EY+AL V+E+++ R + M T++ +I E N+ AI +A RT H+D+ HH +R+ VE G V++EYV+TK Q AD+L K L
Sbjct: 100 YRSLIGCLLYITTCTRPDIAFVVTQLSRFLENPGQQHWNAAVRVLRYLK-------STRQHGIIYQGGTHSVTLKAYSDADWGTNLDDRRFVS--GVMVMIGNAHVVFKSKFQRTVALSSAEAEYMALSLCVQEVLWTRAMLTDMG-TLQRNATIIWEGNQGAIALAQNAGYHARTMHVDIRHHFIRENVERGTVKVEYVDTKNQLADILTKAL 303 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig57026.13252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig57026.13252.1 >prot_H-paniculata_contig57026.13252.1 ID=prot_H-paniculata_contig57026.13252.1|Name=mRNA_H-paniculata_contig57026.13252.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=215bp MQRVCYRELAGALMWLTTMTRPDIANSVRTVGKLCENPGMQQKKAVEKICback to top mRNA from alignment at H-paniculata_contig57026:276..920- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig57026.13252.1 ID=mRNA_H-paniculata_contig57026.13252.1|Name=mRNA_H-paniculata_contig57026.13252.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=645bp|location=Sequence derived from alignment at H-paniculata_contig57026:276..920- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig57026:276..920- >mRNA_H-paniculata_contig57026.13252.1 ID=mRNA_H-paniculata_contig57026.13252.1|Name=mRNA_H-paniculata_contig57026.13252.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1290bp|location=Sequence derived from alignment at H-paniculata_contig57026:276..920- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |