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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 2 |
| Model size | 2004 |
| Cds size | 1794 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5700.13250.1 >prot_H-paniculata_contig5700.13250.1 ID=prot_H-paniculata_contig5700.13250.1|Name=mRNA_H-paniculata_contig5700.13250.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=598bp
MAFLHAAGAVSKSSQYSRRFFCVRKAGNAAHLYQAGISSAEHLSAEEETE
PARARRINRQGLEGHSMATARRSGRYWGSWGRASSKYDIRQDKRRESWSD
ELQSQTGAKHEAPRHNRNRPSGEQLQGEQIRSQYRFNQSWHDETQDRRPE
VYEGRRERRATEHGGGSQRAQHKRLREDSASHVRRVQRPLLRQLNKAGAR
GDWKFAELLLTDALSRPNGREVVDVRVYAAAMDAAAKKGEWEKALKVLNR
MRAESVQPNEIAYNQVIRACGNGGEWKRALGILREMQKSRWIKPTAVNYN
TAITACANSGQWEPAVRLLREMQDADTPISPSVVSFTATMTACGKGGQWE
KAISLLREMQQKGGSISPDTFSYSAAISACGLAGNVKEAVDLLREMEAST
SSVAPNVLNYNAAITACANGGQWEQAVQILTQMKKARREDVVPNAISYAG
AIAACGKAGRPEQALTLLRVMQKEGVASHRVAYHAAITACQECGQWRDAV
DLLREMRKEGGLVTPDAASYTAAIAACGKGGQWAQALALFKMMKRASIYP
DNECYSAVIEACRDSNQLEEAERLRAEKESSMGMTPADDYVISDNVL* back to topmRNA from alignment at H-paniculata_contig5700:8571..12548+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5700.13250.1 ID=mRNA_H-paniculata_contig5700.13250.1|Name=mRNA_H-paniculata_contig5700.13250.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3978bp|location=Sequence derived from alignment at H-paniculata_contig5700:8571..12548+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCTACACATGCCGTGTACGGCGAACGCCCTTCTCCTGCGATATCATTGGA
CTTGGGATTCGCCACGGTGAGCTATTGCTCAGCTGGTTGAAGTTTGCTTA
CATATGGCAATGCCGATAGTCTTGCACTTTACTTCTGGACTCACGTGTAT
ACACTACTGTACTGTACCATAGTGTTGTACTAACAGCTTGTGCTCTCCAT
CCTTGCCTTGATCCCAAACACTACAGGGCAAGGGGCGGTGCTGGTGTTGG
CGTTTTTCAATGTACAGAGGGCATGTTGAAGGGCAATGCACATCGTCGGC
AGTACAAGCTTGTCTTCCCACCGTATTATACTGCATATGTAGTGTGCTGT
ATGGTGTATGTTGCTATCTCCATCGGTCGAGATGTACGGCTGTCTGCACC
TGTCGTCAGAGTAGAGAACATCTACCTACAGTAGTCAGAGATTCTCACTA
CCAGGATACACAACTTGTGTTACAGTAGAGCTCCCAAGGATCTTGCCGGT
TACCCACTGATGACAGCAACACCTGAGTTGACTCCAGTGTAAACCGAGTA
TTCGTGGGCGTGGAAATCTCGATTCCGAATAATTTATTCCTGCCTTTTTC
TTTCCGGATCCCCAGCAGACAAAAGCGACATCTCTACGGGGAAAGTCACG
TCCGGCTCGCTGCTGCTTCAACAAATACGAGTAAAGCATTCGTAGCGGAC
AGAGGGCTGTATACTGTACAGTGCTTACTTATCAGCGCGAACACGAACAA
GCTACCAGGAATTTTCCAGGGGAAACCCATTTTAGTCGTCGTCATCCTCG
CAAATGTCCTACTAAGCAGTGTACTTGACTAGAAAAATATCCCATTAAGG
ATCCATTTACAGTTGTACCTATCCAAACAAATGCCCCAGTACGGAACCAT
TCGCAGTTGTTCATCGAGGCAGATATACTCCACTGTTGTGGGTGCTCAGC
CACAAATACATATCGCATCAGATTCCAGTTGCAGTTTTTGGTTCACGCAT
AAAAATGTTTAACTGAAAAATATTTCAGTCAAGCCCCACACAAATACCGA
TGGTACAGTGCGCGTTGAACACAGTATTCGTCCGGCATTCGAATGGTAAG
GAGTGCTCGTAATTCGAATATACTATGCACTTCATTCGTCGGAGGTACTA
GAAAACGTTCCACCAAATTATTCGTCCTACATCTCGGATGGTACAGAGTG
CAGTCAATGAATCATCCTACTGTAGGAGGGGGGTTGATTGTTTCACGAAG
GCAGCTTCGCAAAAAGCGATGCAAAACTAACGCGAATCAAAACCATCTCA
ATTGCATTTGTTTGTGCATCCCTGAAGTCATACAGTTCACGAATTGAAAT
TGAAGTTCTCTTCAAGGGCAGGCAACAAATACAAAAAAAAAAAAAAATGA
CCCCTTTCTCAAAGCAGCTCCTTCGTTAAGCAAAGCGACTCAGATGCCCC
CGCCTCCTTACCGTGGGATGACTCCGATGTTGTATTCGTGCAAGCTTAGT
TAATGGTATTTTTTTCATGTCTTGTATTCCCATTTGCCCAACGTGAATCT
AACCATGACCATATTGTGACCTTACCCAAATATCGACAAGTGCAGCATGT
AGCACACTTAAAGGAAGAACCAAAGGTGAACATGGTATTGCCAGAGTCAA
ATTTCAGCTTTTCGACCCAACATCAGTTGCACGCATCGACTAACAAGATA
GTATGGCGCAGCTATGTACAGTGCAAGACTGCCCTCATCGATCCAGGACT
CAGTGCTGAGAACGGATGTCCACTGCGGCTCACCGCGTTAGTTCGAGTGG
TATATACTACAGACAGTAGAAATTATTGCGTTGAGCGATGCGATGGTAGG
CTGCAGCAAGTGGATGATTGCACACACATGTAGCCTGTTTCCGATAGCAA
GTTGTCTACAGCAGAGCAACCCTCCTAGTCGCCTTGTGCATCCCTGAGTT
ACGCCGCGTCGCTCTTCATTGTCGACGTCGTTTCTAACAGATTTTCTCCG
TGCTCTAACCTCACATGCATAATTTTTCTTCTCTTGACAGATCGCTTGCC
CCTCCGACAGGATGGCGTTCCTCCATGCTGCGGGAGCAGTGAGTAAATCG
TCGCAATATAGCAGACGCTTCTTCTGCGTGCGGAAGGCCGGGAACGCAGC
GCACCTCTACCAGGCCGGAATCTCGTCTGCTGAGCACCTCTCAGCCGAAG
AAGAGACCGAGCCTGCGCGTGCCAGGAGAATCAACCGGCAAGGCTTAGAA
GGACACAGCATGGCCACCGCACGTCGCAGCGGGAGATACTGGGGCAGCTG
GGGTCGGGCCAGTTCCAAGTATGACATTAGGCAGGATAAGCGGCGCGAGT
CATGGAGTGACGAGTTGCAGAGCCAGACCGGTGCAAAGCACGAAGCACCT
CGGCACAACAGGAACAGACCGTCAGGCGAGCAATTACAGGGTGAACAGAT
CAGGTCACAGTACAGGTTTAATCAGTCTTGGCACGATGAGACGCAAGATA
GACGACCTGAGGTGTATGAGGGGCGGCGGGAACGGCGGGCGACTGAACAC
GGTGGAGGGAGCCAACGAGCTCAACATAAGAGGCTGCGCGAAGATAGCGC
GTCTCATGTGCGCAGAGTACAGCGGCCTTTGCTGCGTCAACTGAATAAGG
CGGGAGCTCGTGGGGACTGGAAATTTGCAGAGCTGTTGCTGACGGATGCC
CTTAGTCGACCCAACGGGCGTGAGGTTGTCGATGTGCGTGTTTATGCCGC
AGCCATGGATGCTGCCGCGAAGAAGGGGGAATGGGAGAAGGCGTTGAAAG
TCTTGAATCGGATGCGGGCCGAATCTGTTCAGCCCAATGAGATCGCATAC
AATCAAGTCATCAGAGCTTGCGGAAATGGTGGCGAGTGGAAACGAGCGCT
GGGTATCTTAAGAGAGATGCAGAAAAGTCGATGGATCAAGCCTACCGCTG
TCAATTACAACACGGCTATAACCGCCTGCGCAAATAGTGGTCAGTGGGAG
CCTGCCGTGAGGCTCTTGAGGGAGATGCAAGATGCTGATACTCCTATAAG
TCCCAGTGTCGTCAGCTTCACGGCTACAATGACAGCTTGCGGTAAGGGCG
GTCAGTGGGAGAAAGCGATCTCCCTCTTGAGGGAGATGCAGCAAAAGGGG
GGTTCTATCTCCCCTGACACGTTCAGCTATAGCGCGGCTATTTCAGCGTG
CGGCCTGGCGGGCAATGTGAAGGAGGCTGTGGATTTGTTAAGGGAGATGG
AAGCATCGACGAGCTCCGTTGCTCCTAACGTTCTCAACTACAACGCGGCC
ATCACTGCCTGTGCAAACGGTGGTCAGTGGGAGCAGGCAGTGCAAATCCT
GACTCAAATGAAGAAGGCTCGGAGGGAGGACGTTGTGCCAAACGCCATCA
GCTACGCGGGGGCCATTGCTGCTTGTGGGAAAGCTGGAAGGCCGGAGCAG
GCCCTGACTCTGTTGAGAGTGATGCAGAAGGAAGGTGTCGCCTCCCACAG
AGTCGCTTACCATGCTGCGATTACGGCCTGCCAAGAGTGTGGTCAGTGGA
GAGACGCGGTAGATCTACTGAGGGAAATGCGGAAGGAAGGCGGCTTGGTA
ACCCCAGATGCCGCCAGCTACACGGCAGCCATTGCCGCTTGCGGAAAGGG
TGGGCAATGGGCGCAAGCGCTGGCTTTATTCAAGATGATGAAGAGGGCTA
GTATCTACCCGGACAATGAATGCTATTCTGCGGTCATCGAGGCATGTAGG
GATAGCAATCAACTGGAAGAGGCCGAGAGACTTCGGGCTGAGAAGGAGAG
CAGCATGGGCATGACCCCTGCAGATGATTACGTGATTTCAGACAATGTGT
TGTAGCAGGACCTCATTGTCTCGCAGCTACTGTAGTGAGGCGGCGGTGTT
GCCTATGCTATCTATGCCTGTGTATGTCGTTGGTTTGCTTTGGAACTGCC
GTGATGGAAGGGCGAAGGGAGCGCGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig5700:8571..12548+ >mRNA_H-paniculata_contig5700.13250.1 ID=mRNA_H-paniculata_contig5700.13250.1|Name=mRNA_H-paniculata_contig5700.13250.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3588bp|location=Sequence derived from alignment at H-paniculata_contig5700:8571..12548+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGTTCCTCCATGCTGCGGGAGCAGTGAGTAAATCGTCGCAATATAG
CAGACGCTTCTTCTGCGTGCGGAAGGCCGGGAACGCAGCGCACCTCTACC
AGGCCGGAATCTCGTCTGCTGAGCACCTCTCAGCCGAAGAAGAGACCGAG
CCTGCGCGTGCCAGGAGAATCAACCGGCAAGGCTTAGAAGGACACAGCAT
GGCCACCGCACGTCGCAGCGGGAGATACTGGGGCAGCTGGGGTCGGGCCA
GTTCCAAGTATGACATTAGGCAGGATAAGCGGCGCGAGTCATGGAGTGAC
GAGTTGCAGAGCCAGACCGGTGCAAAGCACGAAGCACCTCGGCACAACAG
GAACAGACCGTCAGGCGAGCAATTACAGGGTGAACAGATCAGGTCACAGT
ACAGGTTTAATCAGTCTTGGCACGATGAGACGCAAGATAGACGACCTGAG
GTGTATGAGGGGCGGCGGGAACGGCGGGCGACTGAACACGGTGGAGGGAG
CCAACGAGCTCAACATAAGAGGCTGCGCGAAGATAGCGCGTCTCATGTGC
GCAGAGTACAGCGGCCTTTGCTGCGTCAACTGAATAAGGCGGGAGCTCGT
GGGGACTGGAAATTTGCAGAGCTGTTGCTGACGGATGCCCTTAGTCGACC
CAACGGGCGTGAGGTTGTCGATGTGCGTGTTTATGCCGCAGCCATGGATG
CTGCCGCGAAGAAGGGGGAATGGGAGAAGGCGTTGAAAGTCTTGAATCGG
ATGCGGGCCGAATCTGTTCAGCCCAATGAGATCGCATACAATCAAGTCAT
CAGAGCTTGCGGAAATGGTGGCGAGTGGAAACGAGCGCTGGGTATCTTAA
GAGAGATGCAGAAAAGTCGATGGATCAAGCCTACCGCTGTCAATTACAAC
ACGGCTATAACCGCCTGCGCAAATAGTGGTCAGTGGGAGCCTGCCGTGAG
GCTCTTGAGGGAGATGCAAGATGCTGATACTCCTATAAGTCCCAGTGTCG
TCAGCTTCACGGCTACAATGACAGCTTGCGGTAAGGGCGGTCAGTGGGAG
AAAGCGATCTCCCTCTTGAGGGAGATGCAGCAAAAGGGGGGTTCTATCTC
CCCTGACACGTTCAGCTATAGCGCGGCTATTTCAGCGTGCGGCCTGGCGG
GCAATGTGAAGGAGGCTGTGGATTTGTTAAGGGAGATGGAAGCATCGACG
AGCTCCGTTGCTCCTAACGTTCTCAACTACAACGCGGCCATCACTGCCTG
TGCAAACGGTGGTCAGTGGGAGCAGGCAGTGCAAATCCTGACTCAAATGA
AGAAGGCTCGGAGGGAGGACGTTGTGCCAAACGCCATCAGCTACGCGGGG
GCCATTGCTGCTTGTGGGAAAGCTGGAAGGCCGGAGCAGGCCCTGACTCT
GTTGAGAGTGATGCAGAAGGAAGGTGTCGCCTCCCACAGAGTCGCTTACC
ATGCTGCGATTACGGCCTGCCAAGAGTGTGGTCAGTGGAGAGACGCGGTA
GATCTACTGAGGGAAATGCGGAAGGAAGGCGGCTTGGTAACCCCAGATGC
CGCCAGCTACACGGCAGCCATTGCCGCTTGCGGAAAGGGTGGGCAATGGG
CGCAAGCGCTGGCTTTATTCAAGATGATGAAGAGGGCTAGTATCTACCCG
GACAATGAATGCTATTCTGCGGTCATCGAGGCATGTAGGGATAGCAATCA
ACTGGAAGAGGCCGAGAGACTTCGGGCTGAGAAGGAGAGCAGCATGGGCA
TGACCCCTGCAGATGATTACGTGATTTCAGACAATGTGTTGTAGATGGCG
TTCCTCCATGCTGCGGGAGCAGTGAGTAAATCGTCGCAATATAGCAGACG
CTTCTTCTGCGTGCGGAAGGCCGGGAACGCAGCGCACCTCTACCAGGCCG
GAATCTCGTCTGCTGAGCACCTCTCAGCCGAAGAAGAGACCGAGCCTGCG
CGTGCCAGGAGAATCAACCGGCAAGGCTTAGAAGGACACAGCATGGCCAC
CGCACGTCGCAGCGGGAGATACTGGGGCAGCTGGGGTCGGGCCAGTTCCA
AGTATGACATTAGGCAGGATAAGCGGCGCGAGTCATGGAGTGACGAGTTG
CAGAGCCAGACCGGTGCAAAGCACGAAGCACCTCGGCACAACAGGAACAG
ACCGTCAGGCGAGCAATTACAGGGTGAACAGATCAGGTCACAGTACAGGT
TTAATCAGTCTTGGCACGATGAGACGCAAGATAGACGACCTGAGGTGTAT
GAGGGGCGGCGGGAACGGCGGGCGACTGAACACGGTGGAGGGAGCCAACG
AGCTCAACATAAGAGGCTGCGCGAAGATAGCGCGTCTCATGTGCGCAGAG
TACAGCGGCCTTTGCTGCGTCAACTGAATAAGGCGGGAGCTCGTGGGGAC
TGGAAATTTGCAGAGCTGTTGCTGACGGATGCCCTTAGTCGACCCAACGG
GCGTGAGGTTGTCGATGTGCGTGTTTATGCCGCAGCCATGGATGCTGCCG
CGAAGAAGGGGGAATGGGAGAAGGCGTTGAAAGTCTTGAATCGGATGCGG
GCCGAATCTGTTCAGCCCAATGAGATCGCATACAATCAAGTCATCAGAGC
TTGCGGAAATGGTGGCGAGTGGAAACGAGCGCTGGGTATCTTAAGAGAGA
TGCAGAAAAGTCGATGGATCAAGCCTACCGCTGTCAATTACAACACGGCT
ATAACCGCCTGCGCAAATAGTGGTCAGTGGGAGCCTGCCGTGAGGCTCTT
GAGGGAGATGCAAGATGCTGATACTCCTATAAGTCCCAGTGTCGTCAGCT
TCACGGCTACAATGACAGCTTGCGGTAAGGGCGGTCAGTGGGAGAAAGCG
ATCTCCCTCTTGAGGGAGATGCAGCAAAAGGGGGGTTCTATCTCCCCTGA
CACGTTCAGCTATAGCGCGGCTATTTCAGCGTGCGGCCTGGCGGGCAATG
TGAAGGAGGCTGTGGATTTGTTAAGGGAGATGGAAGCATCGACGAGCTCC
GTTGCTCCTAACGTTCTCAACTACAACGCGGCCATCACTGCCTGTGCAAA
CGGTGGTCAGTGGGAGCAGGCAGTGCAAATCCTGACTCAAATGAAGAAGG
CTCGGAGGGAGGACGTTGTGCCAAACGCCATCAGCTACGCGGGGGCCATT
GCTGCTTGTGGGAAAGCTGGAAGGCCGGAGCAGGCCCTGACTCTGTTGAG
AGTGATGCAGAAGGAAGGTGTCGCCTCCCACAGAGTCGCTTACCATGCTG
CGATTACGGCCTGCCAAGAGTGTGGTCAGTGGAGAGACGCGGTAGATCTA
CTGAGGGAAATGCGGAAGGAAGGCGGCTTGGTAACCCCAGATGCCGCCAG
CTACACGGCAGCCATTGCCGCTTGCGGAAAGGGTGGGCAATGGGCGCAAG
CGCTGGCTTTATTCAAGATGATGAAGAGGGCTAGTATCTACCCGGACAAT
GAATGCTATTCTGCGGTCATCGAGGCATGTAGGGATAGCAATCAACTGGA
AGAGGCCGAGAGACTTCGGGCTGAGAAGGAGAGCAGCATGGGCATGACCC
CTGCAGATGATTACGTGATTTCAGACAATGTGTTGTAG back to top
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