prot_H-paniculata_contig57.13245.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig57.13245.1
Unique Name	prot_H-paniculata_contig57.13245.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	232

Homology

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BLAST of mRNA_H-paniculata_contig57.13245.1 vs. uniprot
Match: A0A6H5KA79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA79_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 4.470e-60
Identity = 137/229 (59.83%), Postives = 162/229 (70.74%), Query Frame = 0

Query:    4 GNGGVERLTIQACFKEEREAFIRDLQVLHRQLEAKDRDRARREREYQEATARARVEARSAQERVGLLRKEAEDALSAKGAAEAMAEAASNSLERQTAAVESLRARLRHTERQHKEQMDVTRRQQSAATEDATTERRRLESAALTARKALTDERREWSADKDTLLAAVREACHRADLASGEAEEAKANALSLEGRLQQTLERESTLNTTVDKEREAAREAERRVARAEGD 232
            G  G   LT+Q CF++ERE+FIRDLQVLHRQL+AKDRD ARR+ E Q A +R R EAR+A+ER   LRKE            A    A+  L+RQ AA E+LRARLRH ER HKEQM+V  RQQ AA E    ERRRLES+ALTARK+L+D RR+W+A+KDTL+AAVREA  RADLA  E  EAK+ A  LE RLQQTLERE+ LN  V+    +AR+ ERRVARA  D
Sbjct:  253 GGDGTSMLTMQTCFRQERESFIRDLQVLHRQLDAKDRDHARRDAESQAAFSRVRAEARAARERAASLRKETXXXXXXXXXXXARVGVAAEELDRQAAAAETLRARLRHAERLHKEQMEVEHRQQKAAAEXXXAERRRLESSALTARKSLSDARRDWAAEKDTLIAAVREAGQRADLALAEGSEAKSRAALLEERLQQTLEREAALNAEVESLAGSARDGERRVARAVAD 481

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BLAST of mRNA_H-paniculata_contig57.13245.1 vs. uniprot
Match: D7FYF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF0_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 5.440e-57
Identity = 134/226 (59.29%), Postives = 159/226 (70.35%), Query Frame = 0

Query:    7 GVERLTIQACFKEEREAFIRDLQVLHRQLEAKDRDRARREREYQEATARARVEARSAQERVGLLRKEAEDALSAKGAAEAMAEAASNSLERQTAAVESLRARLRHTERQHKEQMDVTRRQQSAATEDATTERRRLESAALTARKALTDERREWSADKDTLLAAVREACHRADLASGEAEEAKANALSLEGRLQQTLERESTLNTTVDKEREAAREAERRVARAEGD 232
            G   LT+Q CF++ERE+FIRDLQVLHRQL+AKDRD ARR+ E Q A + AR EAR+A+ER   LRKE                 A+  L+RQTAA E+LRARLRH ER HKEQM+V  RQQ AA      ERRRLES+ALTARK+L+D RR+W+A+KDTL+AAVREA  RADLA  E  EAK+ A  L  RLQQTLERE+ LN  V+    +AR+ ERRVARA  D
Sbjct:  305 GTRMLTMQTCFRQERESFIRDLQVLHRQLDAKDRDHARRDAEGQAAFSGARAEARAARERAASLRKEXXXXXXXXXXXXXXVGVAAEELDRQTAAAETLRARLRHAERLHKEQMEVEHRQQKAAAXXXXXERRRLESSALTARKSLSDARRDWAAEKDTLIAAVREAGQRADLALAEGTEAKSRAALLGERLQQTLEREAALNAEVESLAGSARDGERRVARAVAD 530

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig57.13245.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig57.13245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KA79_9PHAE	4.470e-60	59.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FYF0_ECTSI	5.440e-57	59.29	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 88..122
None	No IPR available	COILS	Coil	Coil	coord: 184..204
None	No IPR available	COILS	Coil	Coil	coord: 35..55
None	No IPR available	COILS	Coil	Coil	coord: 212..232

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig57	contig	H-paniculata_contig57:20459..26620 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig57.13245.1	mRNA_H-paniculata_contig57.13245.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig57 20459..26620 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig57.13245.1 ID=prot_H-paniculata_contig57.13245.1|Name=mRNA_H-paniculata_contig57.13245.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=232bp
GKGGNGGVERLTIQACFKEEREAFIRDLQVLHRQLEAKDRDRARREREYQ
EATARARVEARSAQERVGLLRKEAEDALSAKGAAEAMAEAASNSLERQTA
AVESLRARLRHTERQHKEQMDVTRRQQSAATEDATTERRRLESAALTARK
ALTDERREWSADKDTLLAAVREACHRADLASGEAEEAKANALSLEGRLQQ
TLERESTLNTTVDKEREAAREAERRVARAEGD