prot_H-paniculata_contig57.13243.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig57.13243.1
Unique Nameprot_H-paniculata_contig57.13243.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length639
Homology
BLAST of mRNA_H-paniculata_contig57.13243.1 vs. uniprot
Match: A0A6H5K8Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z3_9PHAE)

HSP 1 Score: 382 bits (980), Expect = 1.000e-120
Identity = 229/428 (53.50%), Postives = 272/428 (63.55%), Query Frame = 0
Query:  221 QAQPACWHMKGRLTSTASGRTIALVEGVELSRSLAFEVAASDGRKSTFASRNGGGNXXXGTADSMRVAGTGSNGENGAEGELAVDQALRKPRSWTAFGALASSKFFMYQNPETGEPMETFRHTPVDKKMPVRTYERFSQVVSHLLQPNGRILVVSEWGGRSVKAETANINGVEEIGSDLGRGGXXXXXXXXXDNVG------------LRRVFNLHFFVEARTAKEERELKRRESRPGAKWIAFGATPPPSHGCREVYSYISGGEXXXXXXXXXXXXAKMRGHRDNSDVSGPTRAGILREVGGXXXXXXXXXXXGFAEDSGAANSQGKVGAPTEGLLTYTRYGECPSWYGTGQMCGLDVQAKRVRSFANLPDKLKKRVLDVDPTFESGLPRSLEECRVRVALEKKAREEERRKR-RRSWRWPLGTWGS 635
            Q++PACWHM+GRLT+TA+G+TIALVEGVEL+RSLAFE A+S  RKS+   +   G XXX                    GEL VD+AL KP  WTAFGALA+SKFFMYQ+P TGEPM+ FR+TPV+KK  VRTYERFSQVVSHLLQPNGR+LVVSEWGGRSVKAETAN NGVEEI  + GRGG           V              RRVFNLHFFVEART KEERELKR + RPGA+WIAFG+ PP +HGC+EVYSY++G E             K  G +D    +            G                               GL++YTRYGECP+WYGTG+MCGLDVQA+RV SFA+LP KL++ VL VDP FE+G P ++ E R     ++  REEERR++ +RS R P GTWGS
Sbjct:  226 QSEPACWHMRGRLTNTATGQTIALVEGVELARSLAFETASS--RKSSRGPKRPAGGXXXXXXXXXXXX--------XXXGELEVDKAL-KPGRWTAFGALATSKFFMYQDPATGEPMDHFRNTPVEKKQAVRTYERFSQVVSHLLQPNGRVLVVSEWGGRSVKAETANNNGVEEI--EGGRGGWFPGGARDLGIVNDERSLARSSSSPPRRVFNLHFFVEARTPKEERELKRWQERPGARWIAFGSPPPRAHGCKEVYSYVTGREREGGRGGNER---KEEGKKDRLPWAWNRNKAASDAREGDDDAEGVDDGTVALASXXXXXXXXXXXXXXGGLMSYTRYGECPTWYGTGRMCGLDVQARRVDSFASLPAKLREEVLKVDPEFEAGPPGTMGEVRRAAREQRLEREEERRRKGKRSLRRPFGTWGS 637          
BLAST of mRNA_H-paniculata_contig57.13243.1 vs. uniprot
Match: D7FYF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF1_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 2.070e-117
Identity = 230/420 (54.76%), Postives = 269/420 (64.05%), Query Frame = 0
Query:  229 MKGRLTSTASGRTIALVEGVELSRSLAFEVAASDGRKSTFASRNGGGNXXXGTADSMRVAGTGSNGENGAEGELAVDQALRKPRSWTAFGALASSKFFMYQNPETGEPMETFRHTPVDKKMPVRTYERFSQVVSHLLQPNGRILVVSEWGGRSVKAETANINGVEEIGSDLGRGGXXXXXXXXX----DNVGL--------RRVFNLHFFVEARTAKEERELKRRESRPGAKWIAFGATPPPSHGCREVYSYISGGEXXXXXXXXXXXXAKMRGHRDNSDVSGPTRAGILREVGGXXXXXXXXXXXGFAEDSGAANSQGKVGAPTEGLLTYTRYGECPSWYGTGQMCGLDVQAKRVRSFANLPDKLKKRVLDVDPTFESGLPRSLEECRVRVALEKKAREEERRKR-RRSWRWPLGTWGS 635
            M+GRLT+TA+G+TIALVEGVEL+RSLAFE A+S  RKS   SR     XXX       VAG         EGEL VD+AL KP  WTAFGALA+SKFFMYQ+P TGEPM+ FR+TPV+KK  VRTYERFSQVVSHLLQPNGR+LVVSEW GRSVKAETAN NGVEEI  + GRGG             D   L        RRVFNLHFFVEART KEERELKR + RPGA+WIAFG+ PP +HGC+EVYSY++G E             K    R     +    A   RE G              A  S               L++YTRYGECP+WYGTG+MCGLDVQA+RV SF++LP KL+++VL+VDP FE G P ++ E R     ++  REEERR++ RRS R P G WGS
Sbjct:    1 MRGRLTNTATGQTIALVEGVELARSLAFETASS--RKS---SRRPXXXXXXXXXXXXXVAGA------EGEGELEVDKAL-KPGRWTAFGALATSKFFMYQDPATGEPMDHFRNTPVEKKQAVRTYERFSQVVSHLLQPNGRVLVVSEWDGRSVKAETANNNGVEEI--EGGRGGWFPGGARDLGSGKDERSLSRSPSSPPRRVFNLHFFVEARTPKEERELKRWQERPGARWIAFGSPPPRAHGCKEVYSYVTGSEREGGGGGNERKEGKKA--RLPWAWNRSKAASDARE-GDDNAEVVDDGSVALASSSXXXXXXXXXXXXXXXLMSYTRYGECPTWYGTGRMCGLDVQARRVDSFSSLPAKLREKVLEVDPEFEVGPPGTMGEVRRAAREQRLEREEERRRKGRRSLRRPFGAWGS 403          
BLAST of mRNA_H-paniculata_contig57.13243.1 vs. uniprot
Match: A0A835YPS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPS0_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 2.990e-15
Identity = 56/175 (32.00%), Postives = 74/175 (42.29%), Query Frame = 0
Query:  444 RPGAKWIAFGATPPPSHGCREVYSYISGGEXXXXXXXXXXXXAKMRGHRDNSDVSGPTRAGILREVGGXXXXXXXXXXXGFAEDSGAANSQGKVGAPTEGLLTYTRYGECPSWYGTGQMCGLDVQAKRVRSFANLPDKLKKRVLDVDPTFESGLPRSLEECRV---RVALEKKAR 615
            R G KWI  G +PPP +GC+E Y+Y+                                                             A   G+ G P  GL+TY RYGECPSWY  G+MC LD+QA+RV SF+ LP  L+  V  + P+F   +P + +E R    +VA   KAR
Sbjct:  152 RRGNKWIGIGPSPPPEYGCKESYTYV-------------------------------------------------------------AREGGQDGEPDTGLMTYHRYGECPSWYAPGKMCSLDMQARRVESFSALPKPLQSAVRKLVPSF-CNVPHTAQEFRQTSGQVATTAKAR 264          
BLAST of mRNA_H-paniculata_contig57.13243.1 vs. uniprot
Match: A0A7S2K1Q5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K1Q5_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.580e-5
Identity = 25/56 (44.64%), Postives = 34/56 (60.71%), Query Frame = 0
Query:  541 TEGLLTYTRYGECPSWYGTGQMCGLDVQAKRVRSFANLPDKLKKRVLDVDPTFESG 596
            T+  + Y+RYGECP WYG G+MC L++  KR+ SF + P  L  R+    P F S 
Sbjct:   86 TDATVRYSRYGECPPWYGPGKMCTLELVGKRIDSFRDAPP-LAARIASEVPGFTSS 140          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig57.13243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K8Z3_9PHAE1.000e-12053.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF1_ECTSI2.070e-11754.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YPS0_9STRA2.990e-1532.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2K1Q5_9STRA2.580e-544.64Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..638
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..33
NoneNo IPR availableTMHMMTMhelixcoord: 34..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig57contigH-paniculata_contig57:11769..16121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig57.13243.1mRNA_H-paniculata_contig57.13243.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig57 11769..16121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig57.13243.1 ID=prot_H-paniculata_contig57.13243.1|Name=mRNA_H-paniculata_contig57.13243.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=639bp
MAYQPSPRVSRAKPWRRPAGAAAIATTTAFVREFFSTIFSIIMLGAIALL
LLASTVATATITSISQQPHNGRSQDCSGHHDHQQHNTGFKVRLAALAWGS
RGDNSHRSNIDDVGHFTSAEVGEDVGSAAAFSDPSWTHAAFRAFHEMRAG
APPQSAAAAPAAAAEPPLLDHDRGILHVVRRKFSSLMPRDMSISTAAVDQ
AAEATAAAASREADMTTTPAQAQPACWHMKGRLTSTASGRTIALVEGVEL
SRSLAFEVAASDGRKSTFASRNGGGNGGGGTADSMRVAGTGSNGENGAEG
ELAVDQALRKPRSWTAFGALASSKFFMYQNPETGEPMETFRHTPVDKKMP
VRTYERFSQVVSHLLQPNGRILVVSEWGGRSVKAETANINGVEEIGSDLG
RGGGRRGGGGGGDNVGLRRVFNLHFFVEARTAKEERELKRRESRPGAKWI
AFGATPPPSHGCREVYSYISGGEGGVGGGGGGAGKAKMRGHRDNSDVSGP
TRAGILREVGGGGWRRRRGDGGGFAEDSGAANSQGKVGAPTEGLLTYTRY
GECPSWYGTGQMCGLDVQAKRVRSFANLPDKLKKRVLDVDPTFESGLPRS
LEECRVRVALEKKAREEERRKRRRSWRWPLGTWGSRDE*
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