mRNA_H-paniculata_contig5697.13240.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5697.13240.1
Unique NamemRNA_H-paniculata_contig5697.13240.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig5697.13240.1 vs. uniprot
Match: D7FZC2_ECTSI (Similar to Imprinted and ancient n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZC2_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 3.120e-98
Identity = 169/269 (62.83%), Postives = 198/269 (73.61%), Query Frame = 1 
Query:    1 ISRAEKEENVESQREELEALEAIYGDDFEVLVSAGDATNERNMISESPLVSLRLMLPEGYPSRDFPIHDIIAPGLAQAARHELSQETRYHRNDGDKSLATEDVGDSWKGSRRSNSAGSTTGRGVEGGDVGGE--------AEGFVEIVHGEPFTDRKSTFQAHLARVTSELQVTWVRNRLMENSKIARATHNIAAWRVWDESRGVQLHDNDDDGENAAGSRLAHMLAITGAQNILVVVSRWFGGIHLGPDRFKHINNAARELLVKCGAT 783
            +S  E+E NV +Q EELEALEAIYG+ +E +  +  +   R  +SE PLVSL L LP GYPSRDFP  +I APGL QAAR ++       R D        D GD+  G  ++ S+ + T    +  + GGE        AE +VEI HG+ FTDRKSTFQAHLARV+SE QVTWVR RLMEN K+ARATHN+AAWRVWDE+RGVQLHDNDDDGE+AAGSRLAHMLAITGAQN++VVVSRW+GGIHLGPDRFKHINNAARELLV CGAT
Sbjct:    8 LSVQEREANVSAQLEELEALEAIYGEGYEAVRGSAASPQLRIRVSEIPLVSLHLRLPVGYPSRDFPELEIKAPGLGQAARRKI-------REDYTSGSPAADGGDNNDGDEQTVSSLTATAGKFDEDEEGGEEPLEAELPAEEYVEIFHGQAFTDRKSTFQAHLARVSSESQVTWVRRRLMENGKVARATHNVAAWRVWDEARGVQLHDNDDDGESAAGSRLAHMLAITGAQNVVVVVSRWYGGIHLGPDRFKHINNAARELLVYCGAT 269
[Close]
BLAST of mRNA_H-paniculata_contig5697.13240.1 vs. uniprot
Match: A0A6H5J932_9PHAE (RWD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J932_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 7.900e-52
Identity = 123/248 (49.60%), Postives = 145/248 (58.47%), Query Frame = 1 
Query:    1 ISRAEKEENVESQREELEALEAIYGDDFEVLVSAGDATNERNMISESPLVSLRLMLPEGYPSRDFPIHDIIAPGLAQAARHELSQ------------------------------ETR---YHRNDGDKSLATEDVGDSWKGSRRSNSA-GSTTGRGVEGGDVGGE-------AEGFVEIVHGEPFTDRKSTFQAHLARVTSELQVTWVRNRLMENSKIARATHNIAAWRVWDESRGVQLHDNDDDGE 621
            +S  EKE NV +Q EELEALEAIYG+ +E +  +  +   R  +SE PLVSL L LP GYPSRDFP  +I APGL QAAR +L +                              ET      R D        D GD   G   + S   +TTG+  E  + G E       AE ++EI HG+ FTDRKSTFQAHLARV+SE QVT VR RLMEN K+ARATHN+AAWRVWDE RGVQLHDNDDDG+
Sbjct:    8 LSVQEKEANVSAQLEELEALEAIYGEGYEAVGGSTASPQLRIRVSEIPLVSLHLRLPVGYPSRDFPELEIKAPGLGQAARRKLREALLPSASPSSEAVEVAKPSPGGTVVVFDWVETLRDLLSRTDYTSGSPAADGGDDNDGDETTVSTLPATTGKFDEDEEAGEEPLEAELPAEEYMEIFHGQAFTDRKSTFQAHLARVSSESQVTRVRRRLMENGKVARATHNVAAWRVWDEDRGVQLHDNDDDGK 255
[Close]
BLAST of mRNA_H-paniculata_contig5697.13240.1 vs. uniprot
Match: A0A7S1XJK1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJK1_9STRA)

HSP 1 Score: 187 bits (474), Expect = 8.620e-52
Identity = 90/127 (70.87%), Postives = 105/127 (82.68%), Query Frame = 1 
Query:  412 EIVHGEPFTDRKSTFQAHLARVTSELQVTWVRNRLMENSKIARATHNIAAWRVWDESRGVQLHDNDDDGENAAGSRLAHMLAITGAQNILVVVSRWFGGIHLGPDRFKHINNAARELLVKCGATSDG 792
            EIVHGEPFTDR+STFQAH A V+SE +V  VR  LM+N KIARATHNIAAWR++DE R V +HDNDDDGE AAG R+A +LA+TGA N++VVVSRW+GGIHLGPDRFKHINNAAR +L   G  + G
Sbjct:  173 EIVHGEPFTDRRSTFQAHAAVVSSEAEVFAVREALMQNGKIARATHNIAAWRLFDEHRDVVIHDNDDDGETAAGGRMAELLALTGASNVVVVVSRWYGGIHLGPDRFKHINNAARAILEHMGIIAGG 299
[Close]
BLAST of mRNA_H-paniculata_contig5697.13240.1 vs. uniprot
Match: A7RSN5_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RSN5_NEMVE)

HSP 1 Score: 175 bits (444), Expect = 2.380e-47
Identity = 115/280 (41.07%), Postives = 158/280 (56.43%), Query Frame = 1 
Query:   22 ENVESQREELEALEAIYGDDFEVLVSAGDATNERNMISESPLVSL--RLMLPEGYPSRDFPIHDIIAPGLAQAARHELSQETR--YHRNDGD----------KSLATEDVGDSWKGSRRSNSAGSTTGRGVEGG---DVGG-----------EAEGFVEIVHGEPFTDRKSTFQAHLARVTSELQVTWVRNRLMENSKIARATHNIAAWRVWDESRGVQLHDNDDDGENAAGSRLAHMLAITGAQNILVVVSRWFGGIHLGPDRFKHINNAARELLVKCG 777
            EN+  Q EE+EAL AIYG+DF  +  +      R      PL SL  +L+LP  YPS+  P+ +I +  +      E  +     Y  N G+          + +  E V +  K    +++   T  +G E     D  G           +A   +EI+HGEPFT+RKSTFQ+HLA VT E +V  + + L  N K+A ATHNI A+R+++E R   + D DDDGE+AAGSRL H+L I   +N++VVVSRW+GGI LGPDRFKHINN+AREL+   G
Sbjct:    8 ENLVRQCEEVEALSAIYGEDFASIDESSRMYEIRIKSENDPLYSLTMQLLLPPQYPSQAPPVFEIHSVWMTSVEMREAMEGLYDIYKENQGEIVLYQWVEKLREMVDEKVKEKQK-EETTHTVYPTDDKGFEATTSKDNSGSKFDYNSKNVLDASSSIEIIHGEPFTERKSTFQSHLAFVTKEAEVREMLHELKLNKKVAHATHNIMAYRIYNEERDAFIQDCDDDGESAAGSRLLHLLEILQVKNVVVVVSRWYGGILLGPDRFKHINNSARELIKSVG 286
[Close]
BLAST of mRNA_H-paniculata_contig5697.13240.1 vs. uniprot
Match: UPI0006B086FD (protein IMPACT-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B086FD)

HSP 1 Score: 172 bits (435), Expect = 3.620e-46
Identity = 121/279 (43.37%), Postives = 160/279 (57.35%), Query Frame = 1 
Query:   13 EKEENVESQREELEALEAIYGDDFEVLVSAGDATN-ERNMISESPLVSLRLMLPEGYPSRDFPIHDIIAPGLAQAARHELSQ--ETRYHRNDGDKSL-----ATEDVGDSWK--GSRRSNSAGSTTGRGVE--------GGDVGGEAEGFV--EIVHGEPFTDRKSTFQAHLARVTSELQVTWVRNRLMENSKIARATHNIAAWRVWDESRGVQLHDNDDDGENAAGSRLAHMLAITGAQNILVVVSRWFGGIHLGPDRFKHINNAARELLVKCGATSD 789
            E+E+N+  Q EE+EAL AIYG++++V  S+G++ + E    S    V L+++LP  YP    P++   AP +    + ELS   E  Y  + G+  L        D  D W   G+   +++ S     V+        GG    +   F    I HGE   DRKSTFQAHLA V    QV  ++ +LMEN KIA ATHNI A+R++ E       D DDDGE  AGSRL H+L I GAQN++VVVSRW+GGI LGPDRFKHINNAAR +L  CG  +D
Sbjct:    6 EQEDNLALQVEEVEALRAIYGEEWKVEDSSGNSYSIEIRHKSAEHSVVLKVILPPEYPLHSPPLYQFSAPWMKGYQKVELSTALEDIYFNHSGESILFMWIDKIRDYLDIWDTCGNNIQDTSESIAEEYVDFNFEKYKNGGSSQQKCSDFETPRIYHGETIVDRKSTFQAHLAPVVCVEQVQQIKTKLMENRKIASATHNILAYRIYIEDTKSFHQDCDDDGETHAGSRLLHLLEILGAQNVVVVVSRWYGGILLGPDRFKHINNAARIVLQHCGYITD 284
[Close]
BLAST of mRNA_H-paniculata_contig5697.13240.1 vs. uniprot
Match: UPI001425B851 (LOW QUALITY PROTEIN: protein IMPACT-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425B851)

HSP 1 Score: 170 bits (430), Expect = 5.080e-46
Identity = 111/265 (41.89%), Postives = 145/265 (54.72%), Query Frame = 1 
Query:   13 EKEENVESQREELEALEAIYGDD----------FEVLVSAGDATNERNMISESPLVSLRLMLPEGYPSRDFPIHDIIAPGLAQAARHELSQETRYHRNDGDKSLATEDVGDSWKGSRRSNSAGSTTGRGVEGGDVGGEAEGFVEIVHGEPFTDRKSTFQAHLARVTSELQVTWVRNRLMENSKIARATHNIAAWRVWDESRGVQLHDNDDDGENAAGSRLAHMLAITGAQNILVVVSRWFGGIHLGPDRFKHINNAARELLVKCG 777
            E E+N+  Q EE+EAL AIYGD+          F + V+ G   N R        V L++MLP  YPS   PI+ I AP L +  R E S+   +       ++                             ++G E E    I HGE FT+R+STFQAHLA V +  QV  V  +L EN KI+ ATHNI A+R++ E +G  + D DDDGE AAG RL H+L I   +N++VVVSRW+GGI LGPDRFKHINN+AR L+ + G
Sbjct:    3 ETEDNLSRQVEEVEALAAIYGDEWCVVDEASRIFCIAVTDGTEINPRK-------VCLQVMLPADYPSIACPIYQINAPWLRENERIEFSERLSHVCRXVSINIT----------------------------EIGEEFE-ISYIHHGEAFTERRSTFQAHLAHVITPGQVKTVMKKLYENRKISNATHNIVAYRIFCEDKGTFMQDCDDDGETAAGGRLLHLLQILDLRNVVVVVSRWYGGILLGPDRFKHINNSARNLIQQLG 231
[Close]
BLAST of mRNA_H-paniculata_contig5697.13240.1 vs. uniprot
Match: A0A8C4N6Z4_EPTBU (Impact RWD domain protein n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4N6Z4_EPTBU)

HSP 1 Score: 170 bits (431), Expect = 2.060e-45
Identity = 119/289 (41.18%), Postives = 150/289 (51.90%), Query Frame = 1 
Query:   22 ENVESQREELEALEAIYGDDFEVLVSAGDATNERNMISESPLVSLRLMLPEGYPSRDFPIHDIIAPGLAQAARHELSQETRYHRNDGDKSLATEDVGDS----WKGSRRS----------NSAGSTTGRG-VEGGDVGGEAEGFVE-------------------------IVHGEPFTDRKSTFQAHLARVTSELQVTWVRNRLMENSKIARATHNIAAWRVWDESRGVQLHDNDDDGENAAGSRLAHMLAITGAQNILVVVSRWFGGIHLGPDRFKHINNAARELLV 768
            ENVE Q EELEAL AIYG +  VL       +     ++  ++ L++ LP  YPS         AP L Q +   LSQ+  Y      + + +E +G+S    W    R              GS TGRG  +  +   +A+ F +                         + HGEP TDR+STFQAHLA V    QV  V  RL E  KIA ATHNI A+R+W   R V L D DDDGE AAG RL H+L +  A++++VVVSRWFGGI LGPDRFKHINN AR LL+
Sbjct:    6 ENVERQAEELEALSAIYGPELHVLDGERRVVSFHGSCADGRILHLQMTLPPEYPSN--------APPLYQLSCAWLSQQQLYSLGCSLEQIYSEHLGESMVHLWVEQLREFLQKLESTDEPGTGSQTGRGDYDEAEFDQDADDFDDGNLSLKLLDTISIYHNTADQPLMPVLTHGEPLTDRRSTFQAHLAPVVKTEQVQQVVARLKETRKIATATHNIMAYRIWSAERKVFLQDCDDDGEAAAGGRLLHLLQVLDARDVVVVVSRWFGGILLGPDRFKHINNCARNLLL 286
[Close]
BLAST of mRNA_H-paniculata_contig5697.13240.1 vs. uniprot
Match: A0A0G4G690_VITBC (RWD domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G690_VITBC)

HSP 1 Score: 168 bits (425), Expect = 8.290e-45
Identity = 83/129 (64.34%), Postives = 99/129 (76.74%), Query Frame = 1 
Query:  409 VEIVHGEPFTDRKSTFQAHLARVTSELQVTWVRNRLMENSKIARATHNIAAWRVWDESRGVQLHDNDDDGENAAGSRLAHMLAITGAQNILVVVSRWFGGIHLGPDRFKHINNAARELLVKCGATSDGG 795
            ++IVHG+P  DRKS FQAHLARV     V  V+  LM N KIARATHNI A+R+   ++G QL D+D DGE+AAG RL H+L+I    NI+VVVSRW+GGIHLGPDRFKHINNAAREL+VKCG  +D G
Sbjct:  155 IDIVHGDPIIDRKSVFQAHLARVHDTRDVQAVQRALMRNQKIARATHNIMAYRI-QTAQGHQLSDHDSDGESAAGGRLQHLLSIVNTSNIMVVVSRWYGGIHLGPDRFKHINNAARELMVKCGVIADEG 282
[Close]
BLAST of mRNA_H-paniculata_contig5697.13240.1 vs. uniprot
Match: A0A7S2S5T7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5T7_9STRA)

HSP 1 Score: 167 bits (423), Expect = 5.200e-44
Identity = 116/296 (39.19%), Postives = 149/296 (50.34%), Query Frame = 1 
Query:   25 NVESQREELEALEAIYGDDFEVLVSAGDATNERNMISESPLVSLRLMLPEGYPSRDFPIHDIIAPGLAQAARHELSQETRYHRNDGD-----------------KSLATEDVGDSWKGSRRSNSAGSTTG--------------------------RGVE------GGDVGGEAEGFVEIVHGEPFTDRKSTFQAHLARVTSELQVTWVRNRLMENSKIARATHNIAAWRVWDESRGVQLHDNDDDGENAAGSRLAHMLAITGAQNILVVVSRWFGGIHLGPDRFKHINNAARELL 765
            ++E+  EE EAL +IYGD+ +V+         R  +SE P   L L LP GYP+   PI ++  P L  A R  L+ + R    D D                   L    V      + +  S G+  G                          +G E      G  V  E    V++V GEPF DRKS FQAH ARV    Q  W    L+ +SKIARATHNI A+R +D  + VQ  DND+DGE AAG +LA +L + G  N++VVVSRW+GGIHLGPDRF+HINNAAR+LL
Sbjct:    4 SMEAVEEECEALVSIYGDELQVIREPAWLYAVR--VSEEPECVLHLSLPPGYPTEAGPISELHCPALGAARREVLAAQLRQVWRDADGEPCVFGCIEHARDYIHTELPQAVVEQGSDEADQGESVGTLPGTAPAAASSXPXXXXXXXXXXXXXXSMKGPEEPASPHGVAVRDEHVYAVDVVSGEPFVDRKSAFQAHFARVHCREQCHWFMRHLLSHSKIARATHNIMAYRYFDPRQQVQCADNDEDGEYAAGGKLAELLELMGVNNVIVVVSRWYGGIHLGPDRFRHINNAARKLL 297
[Close]
BLAST of mRNA_H-paniculata_contig5697.13240.1 vs. uniprot
Match: A0A6P8HKP3_ACTTE (protein IMPACT-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HKP3_ACTTE)

HSP 1 Score: 167 bits (423), Expect = 5.330e-44
Identity = 116/304 (38.16%), Postives = 161/304 (52.96%), Query Frame = 1 
Query:   22 ENVESQREELEALEAIYGDDFEVLVSAGDATNE---RNMISESPLVSLRLMLPEGYPSRDFPIHDIIAPGLAQAARHELSQ--ETRYHRNDGDKSL--ATEDVGDSWKGS---RRSNSAGSTTGRGVEGG-----DVGGEAEGF-------------------------------------VEIVHGEPFTDRKSTFQAHLARVTSELQVTWVRNRLMENSKIARATHNIAAWRVWDESRGVQLHDNDDDGENAAGSRLAHMLAITGAQNILVVVSRWFGGIHLGPDRFKHINNAARELLVKCG 777
            EN+  Q EE+EAL+AIYG+DF     +   T E   +N  S    VSLR++LP  YPS   P+ +I++  +      E+++  +  +  N G+  L    E + +  KG    R+     + +   VE       D+    + F                                     +EI+HGEP +DRKSTFQAHLA ++S  Q   V   L +N KIA ATHN+ A+R+++E +   + D DDDGENAAGSRL H+L ITGAQN++VVV+RW+GG+ LGPDRFKH NN AR LL   G
Sbjct:   10 ENIARQLEEIEALKAIYGEDF-YSTDSDSKTCEMLIKNEFSSKFSVSLRIVLPIDYPSNGEPVLEIVSSWMTAKDYEEITECFQEIFMENVGEILLFQCIERLREFVKGKTAERQELEESAFSVADVEPSTNGELDIAETMKSFNLLDCNDDNXXXXXXXXXXXXXXXXXXXXXXXXELNNIEIMHGEPMSDRKSTFQAHLASISSRNQALQVLAELKKNRKIANATHNVIAYRIYNEEKNAYIQDCDDDGENAAGSRLLHLLQITGAQNVIVVVTRWYGGLMLGPDRFKHYNNCARNLLQTAG 312
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5697.13240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZC2_ECTSI3.120e-9862.83Similar to Imprinted and ancient n=1 Tax=Ectocarpu... [more]
A0A6H5J932_9PHAE7.900e-5249.60RWD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S1XJK1_9STRA8.620e-5270.87Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A7RSN5_NEMVE2.380e-4741.07Predicted protein n=2 Tax=Nematostella vectensis T... [more]
UPI0006B086FD3.620e-4643.37protein IMPACT-like n=1 Tax=Limulus polyphemus Tax... [more]
UPI001425B8515.080e-4641.89LOW QUALITY PROTEIN: protein IMPACT-like n=1 Tax=A... [more]
A0A8C4N6Z4_EPTBU2.060e-4541.18Impact RWD domain protein n=1 Tax=Eptatretus burge... [more]
A0A0G4G690_VITBC8.290e-4564.34RWD domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A7S2S5T7_9STRA5.200e-4439.19Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6P8HKP3_ACTTE5.330e-4438.16protein IMPACT-like n=1 Tax=Actinia tenebrosa TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5697contigH-paniculata_contig5697:4656..13029 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score285.4
Seed ortholog evalue2.5e-74
Seed eggNOG ortholog2880.D7FZC2
Preferred nameIMPACT
KEGG rclassRC00024,RC00080,RC00329
KEGG koko:K00135,ko:K01476
KEGG ReactionR00551,R00713,R00714,R02401
KEGG Pathwayko00220,ko00250,ko00310,ko00330,ko00350,ko00650,ko00760,ko01100,ko01110,ko01120,ko01130,ko01230,ko05146,map00220,map00250,map00310,map00330,map00350,map00650,map00760,map01100,map01110,map01120,map01130,map01230,map05146
KEGG ModuleM00027,M00029,M00134
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000302,GO:0000902,GO:0001932,GO:0001933,GO:0003674,GO:0003779,GO:0003785,GO:0004857,GO:0004860,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005844,GO:0006355,GO:0006357,GO:0006417,GO:0006446,GO:0006469,GO:0006950,GO:0006979,GO:0007154,GO:0007275,GO:0007399,GO:0008092,GO:0008150,GO:0009267,GO:0009268,GO:0009314,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010225,GO:0010243,GO:0010447,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010720,GO:0010941,GO:0014070,GO:0016043,GO:0016049,GO:0019207,GO:0019210,GO:0019219,GO:0019220,GO:0019222,GO:0019887,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0030234,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031333,GO:0031399,GO:0031400,GO:0031667,GO:0031668,GO:0031669,GO:0031952,GO:0031953,GO:0032056,GO:0032058,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0032991,GO:0033554,GO:0033673,GO:0034198,GO:0034248,GO:0034250,GO:0034599,GO:0034614,GO:0034644,GO:0035690,GO:0040007,GO:0042149,GO:0042221,GO:0042325,GO:0042326,GO:0042493,GO:0042542,GO:0042594,GO:0043021,GO:0043022,GO:0043086,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043549,GO:0043555,GO:0043558,GO:0043618,GO:0043620,GO:0044087,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045727,GO:0045859,GO:0045892,GO:0045934,GO:0045936,GO:0045948,GO:0046677,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048588,GO:0048589,GO:0048666,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051338,GO:0051348,GO:0051716,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0060548,GO:0060560,GO:0060733,GO:0060992,GO:0065007,GO:0065009,GO:0070301,GO:0070887,GO:0071214,GO:0071236,GO:0071262,GO:0071264,GO:0071310,GO:0071407,GO:0071417,GO:0071467,GO:0071468,GO:0071478,GO:0071482,GO:0071494,GO:0071495,GO:0071496,GO:0071840,GO:0072755,GO:0080090,GO:0080134,GO:0080135,GO:0097201,GO:0097237,GO:0098772,GO:0104004,GO:0120036,GO:0120039,GO:1901561,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902679,GO:1903506,GO:1903507,GO:1990138,GO:1990253,GO:1990497,GO:1990904,GO:1990928,GO:2000026,GO:2000112,GO:2000113,GO:2000765,GO:2001141
EggNOG free text desc.response to benomyl
EggNOG OGsCOG1739@1,KOG3299@2759
Ec32 ortholog descriptionImpact, N-terminal
Ec32 orthologEc-07_001690.1
EC1.2.1.16,1.2.1.20,1.2.1.79,3.5.3.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons6
Model size1458
Cds size750
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5697.13240.1prot_H-paniculata_contig5697.13240.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5697 4782..12447 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930610.716017-UTR-H-paniculata_contig5697:4655..47811622930610.716017-UTR-H-paniculata_contig5697:4655..4781Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5697 4656..4781 +
1691481371.424852-UTR-H-paniculata_contig5697:4655..47811691481371.424852-UTR-H-paniculata_contig5697:4655..4781Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5697 4656..4781 +
1622930610.8395696-UTR-H-paniculata_contig5697:12447..130291622930610.8395696-UTR-H-paniculata_contig5697:12447..13029Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5697 12448..13029 +
1691481371.5045445-UTR-H-paniculata_contig5697:12447..130291691481371.5045445-UTR-H-paniculata_contig5697:12447..13029Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5697 12448..13029 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930610.732154-CDS-H-paniculata_contig5697:4781..47831622930610.732154-CDS-H-paniculata_contig5697:4781..4783Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5697 4782..4783 +
1691481371.4368532-CDS-H-paniculata_contig5697:4781..47831691481371.4368532-CDS-H-paniculata_contig5697:4781..4783Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5697 4782..4783 +
1622930610.753084-CDS-H-paniculata_contig5697:6224..63521622930610.753084-CDS-H-paniculata_contig5697:6224..6352Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5697 6225..6352 +
1691481371.445862-CDS-H-paniculata_contig5697:6224..63521691481371.445862-CDS-H-paniculata_contig5697:6224..6352Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5697 6225..6352 +
1622930610.7697163-CDS-H-paniculata_contig5697:7546..77821622930610.7697163-CDS-H-paniculata_contig5697:7546..7782Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5697 7547..7782 +
1691481371.4550898-CDS-H-paniculata_contig5697:7546..77821691481371.4550898-CDS-H-paniculata_contig5697:7546..7782Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5697 7547..7782 +
1622930610.7868483-CDS-H-paniculata_contig5697:8896..90201622930610.7868483-CDS-H-paniculata_contig5697:8896..9020Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5697 8897..9020 +
1691481371.4658196-CDS-H-paniculata_contig5697:8896..90201691481371.4658196-CDS-H-paniculata_contig5697:8896..9020Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5697 8897..9020 +
1622930610.8027492-CDS-H-paniculata_contig5697:10145..102271622930610.8027492-CDS-H-paniculata_contig5697:10145..10227Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5697 10146..10227 +
1691481371.477101-CDS-H-paniculata_contig5697:10145..102271691481371.477101-CDS-H-paniculata_contig5697:10145..10227Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5697 10146..10227 +
1622930610.8223832-CDS-H-paniculata_contig5697:12269..124471622930610.8223832-CDS-H-paniculata_contig5697:12269..12447Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5697 12270..12447 +
1691481371.4933612-CDS-H-paniculata_contig5697:12269..124471691481371.4933612-CDS-H-paniculata_contig5697:12269..12447Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5697 12270..12447 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5697.13240.1

>prot_H-paniculata_contig5697.13240.1 ID=prot_H-paniculata_contig5697.13240.1|Name=mRNA_H-paniculata_contig5697.13240.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=250bp
MISESPLVSLRLMLPEGYPSRDFPIHDIIAPGLAQAARHELSQETRYHRN
DGDKSLATEDVGDSWKGSRRSNSAGSTTGRGVEGGDVGGEAEGFVEIVHG
EPFTDRKSTFQAHLARVTSELQVTWVRNRLMENSKIARATHNIAAWRVWD
ESRGVQLHDNDDDGENAAGSRLAHMLAITGAQNILVVVSRWFGGIHLGPD
RFKHINNAARELLVKCGATSDGGDSSSSLNTNSASGGSDKSKGSRRRRG*
back to top

mRNA from alignment at H-paniculata_contig5697:4656..13029+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5697.13240.1 ID=mRNA_H-paniculata_contig5697.13240.1|Name=mRNA_H-paniculata_contig5697.13240.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8374bp|location=Sequence derived from alignment at H-paniculata_contig5697:4656..13029+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATATCAAGAGCGGAAAAAGAGGAGAATGTAGAGTCTCAGCGCGAGGAACT
GGAAGCCCTGGAAGCAATCTATGGAGACGACTTCGAAGTGCTCGTCTCTG
CCGGAGATGCGACGAACGAACGAAACATGTGTGGACGCTTTCCTGAGGTA
AGCCCAGTCCTACCCCCTGACAGTATCTGATATAGCTTGGACACAAATGC
ATCCTAACACAGGATGCCGATAAGAGCTAAACCGCATGTAATAAAGCGAC
GATGTATTGCACTATATAGGATGTCACAACTCTTTCACGTTGCCCCCAAT
ACAACGAGAGGCACATGCAACAATTCACACAGCTTCGGTGATACCTACGT
TAAGATATCGTAGCAGCAAAACCTCCCCACTACTGCTGCAATTCCTTTTG
GCTTGTTGCTCCCCCCTCAAAGTCTAGAGCAATGTGTGTCCTACTTTCTA
TACGATACCAAACACCTAATTTTTCGTGTATGCGTAATTACGTAGTGTAG
CACCCAGCTCCAACGTCTCAATTTCAGCAAGCCCGCGTCTTCGCGCCAGC
AGAGCGAGCTGTACGAACAGGCTGAATTCGGCAAACTGTCGAGGATTCCC
GTCCTTCTTCGTTGTTGATGGGGTTGGCTACAGCATCTTGGCTAATGTCT
AGATAACAAAACACTGACGAACGTTGATTTGTAATGATGGTCATTAGCTT
CAAACACTCTGTCTGTTTGCAAGGGGGCATGTATCTGTCATTTTAGGCAC
CCCCTCTGCCCCTTTTCGACCTCAACCCTTTGAAATTTTCTGACATCCTA
ATCAACTGTGGAGTGCTTGCACTCTGTATATTACTTTGTCGTTTCGAAAA
AAAAATGTGTTTGTCCGTTCTCGCTTTACACTACAAGTGAATCCAGGGTA
AAAGCCTCCCAGGACGACAAAAAATCGACCCCCCGTTGCACCTGAGATGC
AATAACATTCTGTCAACGTATTTGTCATTATCCATGATTGCCCAGTAGAA
AATCTATCTTCTGGCCGTTACGAGCTCCGGTTACTAAAGGGTTAAATGGG
CTTTTATCTGCCTTTTTGGCCGCGCTAAAGTATGTCGTTTGACGTCATGG
AGTCCCTCGATCGCCTGAATTGCTCAGATTGACTCATGAGGGTCACTCCG
ATACGCTGTCAGTGGCCGCGAAACTAAAAAAATACAAATATTGGAGTAAT
ATGCATAGTACAGGGCTCACGTCGAGCGTAACAGGCAAAATATGTGTGGT
AGGGTTCCTAGTGGATATGTGTAATGAATGGCGGATCCCACTTTTTGTAG
ATAAAATGCTTCGATATCTCCACCAAAACGTAACCAAATTCCGTGAACCC
AGGTGCAAAAACATAGCTCACACTTGCAGGCCACACACACATACACATTG
CATCACTCCGAACGTTAAAATTGGCCTCGCTCCCCAGGTAAACCACAAGC
TTAACGACTGTTTGCTAAATACAAATTCATTTGCCATTTTTGGTTCATTT
CATTTTTCTTTATACCTGATCCCCTGCCTAATCTTCTCCACGTCGGCGTT
TCAAGCAGATTCGCCTGAGGATATCAGAGTCGCCGCTGGTCAGCCTACGC
CTGATGCTGCCCGAAGGGTATCCGTCGCGCGACTTTCCCATACACGATAT
CATTGCCCCCGGGCTTGCGCAAGCGGCGCGCCACGAGCTTTCTCAAGGTA
TGGCCGGACGTACTATCCTACCGCACAAACATACCGTGAACTTAGAGCGC
GCACCTGCTATTAGTAGACGCACGGGATTAGCCTTTCAATCGCAAATTCA
CCAGCATCTGCGTCATCTAAAATCCCTGCCATACTGATCGCATCACCTTC
CTCAGCCACCGCTATGACACCCTCCGTCATCACGGCACCTTCGGCGGCAC
TTTCGTCGGCGTCTACCGACACCGTGAGAACAAACGTCAGGCCTCCGACG
GCCACTCTCTGGGACCGCCCCGCCCGCTCCAAACCGCCCCAGGTTGTTGG
CACAGTCGCACTACTTGACCGGATACTATCTGAGAAATCGTATCCATTAG
GAGTTACGGGAAGGGCCAAGCAATTAAGCAACGCGCATAATGGCTCGCGC
CGCCTCCTTCTGTCTCAAAAAAAAGGTTGAACGACGGCGTCGTCTGTATT
TTCCCAGATAGCGTTCAGACACGTCGGTGGCTGTGCCAAAGCCTGAGGGT
CGGCGCGTCGCAAGATAGAGGGTCGGCGCAATGGTGTTCGTGGACGCTGA
GAGCGTCGCTGCGGGGGGGCCGTAATGGCGGGGGATGTCGTGGTGGCGGC
TGTGGAAGGCGATGCTTCTGGTTCGGCAGGAGTGTCGATTTTATTCTCAT
CTTTCGGCTATGTCTGTCAGAGCTGATTGATCTACTAGCATTTTTTCCCT
CCTGCTTTGGCCTTTTCCAAATTCCCCCTGTCCCATCCTCCTCCGATTTG
TTCAAATGCTGCTTTGATAATATGTACGCAGCTGAGATTTCAGGTGGACT
GCGTAGCTTGAACATGAGCTCAATATATTTATGCCACTGAATTCATCATA
CTGTGTCCAATATGAAAATGTGGCTCAACTTGTGAACAAAATATCCCCCC
CCCGCGCGCGCTCCCCGTCCCCTCGCACAATGATACAACTCCAACTAGCG
CTTCGACCATCGCGTGCCCATGAGCAAGAAGAGCCAGGAGATGATTTTAC
TCCGTCCCCGGGCGGTGCTGTAGTCGTGTTCGATTGGGCGGAAACGTTGC
GGGACATTCTCTCCCAAACGTACAAGAACAGAAATATTACCCCTGGTCAA
TCAGATCCAGGGTCATCATCATTATCGTCATCGTCACTGCCGCTGCCACC
ACCAGCCCCAAACCCGGCCCACAACGAAGAATCTCGAGCAGAAACTCGCT
ATCATCGAAACGACGGGGATAAATCTCTTGCGACGGAGGATGTAGGCGAT
TCCTGGAAGGGTTCGAGGAGAAGTAATAGTGCTGGTAGCACGACTGGACG
GGGGGTGGAGGGGGGTGACGTTGGAGGGGAGGCAGAAGGGTTTGTAGAGA
TTGTGCATGGTGAGCCGTTCACAGATCGCAAGAGTACGTTTCAGGCACAC
CTCGCCAGGGTAACCTCCGAGCTTCAGGTAGGTAGCGTGACGTGGCGTGC
TGTGGCCAGGGTTGAGGGAGGCTAGCCGGTATGAAAGAACAGCTACTGCT
ACTCAAAATGTTCTTTCTGTTTACGGCTGTTCTAAATGAGGTGTACCTTT
TTTTTCTTCCTTTTCTCGATAACAGGCTCGGATTTATGTGGGAAGGAAGC
ACTACTACTATTGGCAAAATTACATGTTTTTTTTTACCTGAAAAAAAAAA
AATCGATGAGGAACAAAAAAAATGGGGAAGAAACGATGAAAACACCAACG
TTTGGAATGGCCCTTAGCTGTGTGGCTGATACCGTTGTGTCTTCTTGTGA
TAGTGCCTACAGCTGGGACATAAAGCTTACACGTAAATACCACAAAAGTT
CTTGATTTTATCGTGCGACTCAATGTGAACAATATTTTTGGTTCAAATAG
AAGGGGTGGCACAGTGAAGTTTACCCTAGTTTGTCCTCAAATTGACATGG
TTAAGCACCGCTTGCTTTTGCTGTGAGATAGCTGATAGTACCGCGGTCAA
ATTTCATACCTTGTCATAGCGCACCGCTCAGCGGCGCAGCGTTTGACCGA
TCTACGGAGACCGCTAGGGCGTCAGGCTTAGGGTTAGGGGTTAGGTGGGG
TCGCGTGGGGTTGGGTAGGATTTGGTGGGCTTGAGTTTGGTCAGCTTGGC
CCTAGCCGTAAAATTTTGGAAGTGAATGAAATCAAATATGGAAATTTGAG
GATGATTTGGGCGGGCAAACTCGCCTCGAGTGGAGAGTTCGATGCGCCTT
GTTCAATGAGGAGAATTGCCGTCCTTGAGACCGTGTGTCATATCGTGAGT
TTTGTCATTTTGTTGTATGGCAAGAAAGTGATGTGGTGTTATTGTCGCTA
ATGTCGACTCGGAAATGTCATTAGGAGTGTTTGAGAGATGGTATTGTTGG
TGTTGTTGGTGTTGTTTTCATTTTTATATATCGTAGTTGGGAGCTGACCC
TACTGTGAAGAGGGTGTGTGGTATAGTAATACAGGAAAAATGACAGAAGA
AAAAGGCCCGGAAAAAATCCTCTGTTATCTTTCTGCGAGATTCAACAGGC
GGCAAGCCGGGAATTTCGAACGTTGTCTTTTGAATGCTCAGGTAACTTGG
GTAAGGAATCGGCTGATGGAGAACAGCAAGATAGCGCGAGCGACTCATAA
CATCGCGGCTTGGAGGGTATGGGACGAGTCGCGGGGAGTGCAGCTTCACG
ATAATGATGATGATGGTGAGTATGAGCTGGTTGGAGGTGAAAGAAGGCAG
CTACTTCGTCGCAAGAACGATGTGTAAAGGAGGAACTACAGCTGAACAGG
AACTTCTTCCCCAAGAAGGTCCTTCCTTTTCTTCCCCGACGCTTCGGCAA
CGTGACTATCAACCACTTGGTCATGATCCATATTCGTGATTGAGAGGTTT
AAAAGTTGACTTCTTGATTTATAATTGCAGTAAATCCTGCAGTAAAGATC
CCAAAATGAGTCGCGCTGTGCGGGGAAAGGGTTAATACATGTCTAAAGAA
GGAAGCTCGGCAAGCATTAAATTCCCCGAAGTGTTTTTTTACTGATTGTA
AGAGCTTCTTGTTTTTTTTTATTTGTGAATTCCGTATTTTCGCCTTTGAG
CATCAGAATGTGCGAGCACATGGAGTGAAGTCTTGTTTTCGCTGGTTGTT
CGTTTCATAAAGTATTAGTGTTCAAAGTGGTCAGTCTTGGATGTTACGGG
GCATGTGATGGATTAAACGTGCTCATGCTCAACCGTTATTATTATTATTA
TTATTATTATTATTATTATTATTATTAGATTATTATTATTATTAGATTAT
TATTATTAGATTATTATTATTTTTTGTTTATTGTTTAATTTTGATTTTTT
TCCGTAAGAGATGCTCGAAGTGTTTGTATTTATCCGGATAGTGTATTATT
TCATCGACGAGGAAAATTCTTCTATCGCCAAGAACAAATTATTCACCCCC
CGGATGACTGGGATTATTTGCGACTGTTTAAAATGCCTGAGTTGCAGAAT
GTGCGGGATGAATGATGACACATAGATTAAGGTGTTTATACCTGTTTTTT
CATCTTGAACTAGTATTCGGAGCAGTCGTAGATAGTCCGAGGCACATAGA
GGTCAAGCTATTATTCTGAAATTCAGTCAATTTGTTTCTTTGAAATAGTC
GCAAGTAGTCGTAGGTGAAATTGTTAAACTCGATTCATCGCGGAGTCAAT
AGGAGTCTATCGGGGTGAACTTTCTGTTGCTTGGTACCAATATCTGTGCG
CCGAGGGAGAAACTGGTGGATTTATCGTAATTTATCATTGATCGCATCGA
TATCACTGGTCGTTATCGTTGGTCGTTATCGCTGGTCCAGGAGAAAACGC
GGCCGGCAGCCGCTTGGCGCACATGTTGGCCATCACCGGTGCTCAGAATA
TCTTGGTGGTGGTTTCGCGATGGTAAGACTTTTCAAGACACTAGGTTTGA
TGGGTCTTTTGCTGTGAATCGCTTTCGATTACTGACTGCAGGGGTGCGAG
CGTTTTTTCAAAAATAGATATCTCGAGAGCGGAGACCTCACGTGGTCAAA
GAGAGCTGGCCAATCGACAAACTTTGAGCAAGGTTTATCCAACGATACCC
CCCTTTCGTTGTCAGGTATAGCGTAGTTGTCGAGATAATAGTAGCGCTTG
AAAAGCGTCAGAATGCGGTGCGATAACGAAGGATATCACGGTGCTGTAGA
CTAGTAGGCGCTGTAGTTTTGGTAAATGGCACAGGGTGTAGCTTGGTGAA
GCACGCCGCCTGCGACAAGATGCTCGCCGTGTGCTTTTTTTGTAAGAGTC
AACATTGAGTGATGATGCATGCGCACACGTTGTATATACGGTACGCACGC
GCCTGGTGTGCTTGCCTCAACTGCTTTAGAACGGATACCGTGTTAATTGC
TGCTGTTCCCGACTCGCGATATCCCGAATATGTGCACGAGCAGAAGGTTA
CATGTGACAATATAAAAAACATTCCAGGGTTTGGGCTAGAGCATCTCGAT
GTTGAGACTTTTTGAATACACTAGGGTTGGTATCATGAACTGGCTTACAA
AAGCCCTCGTGGCACAAGTATCGGAAGCGAGTTTTGCCCTGATCTCCTAG
GGGCTGAACATAAAAGAACAGGTGTTTTTACGTTGACGTACCTCCCGTCG
GCAGTACCTCTTCCATACAAGATGCGGTCTGAATATCAACGAATGTTCCT
GGATCCAACTGGATAAAAACAAATGTTAATTAAAATCTCGCACGTTTGTA
TCCCTGAACACTATGTAAGGTACGATGCTATCCTGGCTCGAAATTATCTA
CGTTGAAGCACGTCCGTTTAAGTTTGCCAGTATTTCGAGCGCCAAGTATA
AGACTAACGTTTATGCTGCAGCCTAATTTTTAATCGTTTGACGTGTGGGA
TCATGGGCGATGAGACGATCCTGTACCCGAACAAGACCGCGCGCATTATT
TTCGGGTGGGATTGAAAGCGATGATGATGATCTTTTTACTAGTGCAGACT
TGATGAACCACGTGGCCTTTCCCGCGTTCCAGTGTGGTGCCAATCACTAG
CGGTAGAGGGTGATTTGGGGGGTGAATTCCTATGATGCGTGGGGTCAATC
TTGATGTTCCATATCGTATCAACATTTCTATGTGTGCTCTGGTGCGTTGG
TGTTAGTTTTCGTTTACCCCGGGTTTAAGGCGGCTTGGTGTCAAATTCGT
GGCGAACACGACAAAATTCGCATATTTTTTTCATGGGCCGAAAAGCGGGA
ATTTTGGCACTGAATACAGGTTCTGCAAACGTAATGCACACAACACGCGC
CATGCGCCTTGAATTTGGTCTGTCGGAGGCGTGGGGGAGGGGAGGAGGAA
ATAGGTTCCTGTGCGAACATCGAATCGTCAGACTGACTGCCCATTGATGG
GAGACGGCTGTTTTTCATGTTGCTCAGCAAGAAGAGGAGGCAGCTAATTT
GTAATTGGTCTGGAGAATGGAGTGAAATTTTGTTGGTAAAATACCACATA
TGCAGAAGGCATAATCCAATCATAATATGTTGGTTGCACTGGTGCTGCTT
GCTTGTGGTGTGCCATAGGAATGTGTGTACTCGGTTCTGCTGTGCTATGA
TCAACGGGTTTGACCAAGTGATGAAATCTCATGTGATCGGGAGAAAGTGC
CCCCATGTACAGTGGCTCTCTGAAGTATTGGTATATTTTCTTTGCGTACA
ACAACGGCGGACGCACTTGGATACATTTGAAGTCAACCGATGTCCTGACA
TGCCCAGGATCCTCGCGCGCTATAGCCACTGGTACAGGAGTAGTAGGCAG
GCTATAGTTGTGTGTCAGTGGCGTGTTACACTTGAAAAAAAGCCCTTGGA
TAGAGAATAGGAATTGTTCGGAGAGGAACGTCATCATCATCATCATCATC
ATTGCGATATTAATTAGTGCAGGATTCTCACCCATCGCGTGCTTTTCTCC
AACATACTCTTCAGGTTCGGAGGGATTCACCTCGGGCCCGATCGCTTCAA
GCACATCAATAACGCCGCTAGAGAGTTGCTCGTCAAGTGCGGAGCTACGA
GCGATGGCGGGGACAGCAGTTCGTCGCTCAATACCAACTCCGCGAGTGGC
GGAAGTGACAAGTCGAAGGGAAGTCGACGACGGCGGGGCTAGAGTCTTCC
AGTAGATACAGGGAAAAACATGGTCAAGACTAGTAGTAGAATCGAAATAC
AAATGCTTTGACGTCGTAGTTCGGCACTTCGAGACGTGGACCATTGAGGT
CTGCTTTTTTTCATGTAACAGGAAATAGGTAAATCAGACCTTGGGATGCA
AACCCATCGCAGATCTGCTTTTGGGCACCCTCGTGGGACGCTGGAAGAAA
TGCTGATCTTCAACACGAACCGGATATAAATCTTCTGCGCTGTTCGAAAA
GTACCGCATCCCGAAGAGGTCAAGTATCAAGGAAGATATCAGCCATGGTC
TCCTGGGGATCCGAGAAAACAAAGTGAGACATGACTGCTCTCGTGTATTC
ATGCTCCAGAGCTTTTCCCTCAACCTGCGCACAACGGCTCCCTGCGCTCA
CACGAGGGTTCGTCGTTCAAAGTTACTCAAATGTTCCGAAATGACGACGA
TGGCAGCGGCAACCTCACAGTCTGTATCAAGTAATAGGATACGCTACCGT
GCTAAGATTCGTGAGGTAACGTAGGGTATTTCCAGTGGCTACATGTGTAT
GCTGTATTCTTGGTGAGGTCATCA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig5697:4656..13029+

>mRNA_H-paniculata_contig5697.13240.1 ID=mRNA_H-paniculata_contig5697.13240.1|Name=mRNA_H-paniculata_contig5697.13240.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1500bp|location=Sequence derived from alignment at H-paniculata_contig5697:4656..13029+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATATGATATCAGAGTCGCCGCTGGTCAGCCTACGCCTGATGCTGCCCGAA
GGGTATCCGTCGCGCGACTTTCCCATACACGATATCATTGCCCCCGGGCT
TGCGCAAGCGGCGCGCCACGAGCTTTCTCAAGGATATCAGAGTCGCCGCT
GGTCAGCCTACGCCTGATGCTGCCCGAAGGGTATCCGTCGCGCGACTTTC
CCATACACGATATCATTGCCCCCGGGCTTGCGCAAGCGGCGCGCCACGAG
CTTTCTCAAGAAACTCGCTATCATCGAAACGACGGGGATAAATCTCTTGC
GACGGAGGATGTAGGCGATTCCTGGAAGGGTTCGAGGAGAAGTAATAGTG
CTGGTAGCACGACTGGACGGGGGGTGGAGGGGGGTGACGTTGGAGGGGAG
GCAGAAGGGTTTGTAGAGATTGTGCATGGTGAGCCGTTCACAGATCGCAA
GAGTACGTTTCAGGCACACCTCGCCAGGGTAACCTCCGAGCTTCAGAAAC
TCGCTATCATCGAAACGACGGGGATAAATCTCTTGCGACGGAGGATGTAG
GCGATTCCTGGAAGGGTTCGAGGAGAAGTAATAGTGCTGGTAGCACGACT
GGACGGGGGGTGGAGGGGGGTGACGTTGGAGGGGAGGCAGAAGGGTTTGT
AGAGATTGTGCATGGTGAGCCGTTCACAGATCGCAAGAGTACGTTTCAGG
CACACCTCGCCAGGGTAACCTCCGAGCTTCAGGTAACTTGGGTAAGGAAT
CGGCTGATGGAGAACAGCAAGATAGCGCGAGCGACTCATAACATCGCGGC
TTGGAGGGTATGGGACGAGTCGCGGGGAGTGCAGCTTCACGATAATGATG
ATGATGGTAACTTGGGTAAGGAATCGGCTGATGGAGAACAGCAAGATAGC
GCGAGCGACTCATAACATCGCGGCTTGGAGGGTATGGGACGAGTCGCGGG
GAGTGCAGCTTCACGATAATGATGATGATGGAGAAAACGCGGCCGGCAGC
CGCTTGGCGCACATGTTGGCCATCACCGGTGCTCAGAATATCTTGGTGGT
GGTTTCGCGATGGAGAAAACGCGGCCGGCAGCCGCTTGGCGCACATGTTG
GCCATCACCGGTGCTCAGAATATCTTGGTGGTGGTTTCGCGATGGTTCGG
AGGGATTCACCTCGGGCCCGATCGCTTCAAGCACATCAATAACGCCGCTA
GAGAGTTGCTCGTCAAGTGCGGAGCTACGAGCGATGGCGGGGACAGCAGT
TCGTCGCTCAATACCAACTCCGCGAGTGGCGGAAGTGACAAGTCGAAGGG
AAGTCGACGACGGCGGGGCTAGGTTCGGAGGGATTCACCTCGGGCCCGAT
CGCTTCAAGCACATCAATAACGCCGCTAGAGAGTTGCTCGTCAAGTGCGG
AGCTACGAGCGATGGCGGGGACAGCAGTTCGTCGCTCAATACCAACTCCG
CGAGTGGCGGAAGTGACAAGTCGAAGGGAAGTCGACGACGGCGGGGCTAG
back to top