prot_H-paniculata_contig569.13235.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig569.13235.1
Unique Nameprot_H-paniculata_contig569.13235.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length589
Homology
BLAST of mRNA_H-paniculata_contig569.13235.1 vs. uniprot
Match: D7G4F1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F1_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 3.850e-30
Identity = 90/248 (36.29%), Postives = 129/248 (52.02%), Query Frame = 0
Query:  154 KLRAYLPDSVYLWACGVKAAPEDE-DVSATDMAAGWLTLFTQIMSYLAL-------VLNSDDPEEGGSYSIFSVGLAMYLMVVIAAPDIRAGYTLLSFGRSAL--------RRTFGACLLCSMFLLVYASMRVLFAEASGNAELVIGAATVLFITDVDEKMMMVLRTKHQQWRMFCVLETFGFSFWLALVGVLYLGDPGAIS---PLGTATSGGEFADNADLHYWVPSFFVFAFTPGTITCCALVLNN 382
            KL  +   SVYLWACG +   + E  V+  +  A W+ L TQ + Y  L         +SD   E   YS+ ++ ++MYL++ IA  D+  G  L+  GR +         RR FG  L+ ++  L+ AS+RVLF  +  N  LVIGAA VLFI DVDEK   VL+    +WR+F VLE  G SF LA   V   G+ G ++   P   A +     D+ D+  W    ++F   P T+T CAL++ +
Sbjct:   44 KLEGFQAGSVYLWACGERDQDDGEAPVTVPEAVAAWVILLTQAICYARLWYVGGNEFTDSDTSSETIDYSMLAIAVSMYLLLSIAVADLCGGCALVVEGRGSGDEFVWFTGRRLFGVFLVATLLTLIGASVRVLFFSSEDNVNLVIGAAAVLFIADVDEKAHTVLKNVSGKWRLFWVLEVIGMSFVLATFSVKATGNDGRVAGREPDRAACAAWTDGDDCDIFTWP---YIFLELPLTVTVCALLITS 288          
BLAST of mRNA_H-paniculata_contig569.13235.1 vs. uniprot
Match: A0A6H5JP75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP75_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.180e-12
Identity = 77/250 (30.80%), Postives = 111/250 (44.40%), Query Frame = 0
Query:  206 DDPEEGGSYSIFSVGLAMYLMVVIAAPDIRAGYTLLSFGRSAL--------RRTFGACLLCSMFLLVYASMRVLFAEASGNAELVIGAATVLFITDVDEKMMMVLRTKHQQWRMFCVLETFGFSFWLALVGVLYLGDPGAISPLGTATSG-GEFADNADLHYWVPSFFVFAFTPGTITCCALVLNNIVLKLGAARAAADVARLRGLLWFFDFLSDWVREDPLFAGAWIVLLIDTMILGVSFSYTVITRRS 446
            D   E   YSI ++ ++MYL++ IA  D+  G  L+  GR +         RR FG  L+ +   L+ AS+RVLF  +  N  LVIGAA VLFI DVDEK   VL+    + R+  VLE  G SF LA   +    + G ++      S    + ++  +  W   FF    T  T++   L + +++L                          WV     F   WI+LL   ++L V     VI RRS
Sbjct:   90 DTSSETVDYSILAIAVSMYLLLSIAVADLCGGSALVVEGRGSGDDFVWFTGRRLFGVFLVVTFLTLIGASVRVLFFSSQDNVTLVIGAAAVLFIADVDEKAHTVLKNFSGKSRLCWVLEIIGMSFVLATFSLKATDNYGRVAGKDAYKSDCAGWGNDCGIFTWQYIFFELPLTV-TVSRPTLAMEHVLL----------------------LALCWVSMPYFFR--WIILLAVAIVLFVVVVAVVIARRS 314          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig569.13235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4F1_ECTSI3.850e-3036.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP75_9PHAE1.180e-1230.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 418..439
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 517..537
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 312..332
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 247..265
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 588..588
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 236..246
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..184
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 333..357
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 484..505
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 506..516
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 204..214
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 266..270
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..235
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 440..450
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 451..472
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 358..380
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 381..417
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 271..291
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 292..311
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..203
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 538..557
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 473..483
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 558..587
NoneNo IPR availableTMHMMTMhelixcoord: 558..580
NoneNo IPR availableTMHMMTMhelixcoord: 363..385
NoneNo IPR availableTMHMMTMhelixcoord: 419..441
NoneNo IPR availableTMHMMTMhelixcoord: 247..266
NoneNo IPR availableTMHMMTMhelixcoord: 451..473
NoneNo IPR availableTMHMMTMhelixcoord: 520..542
NoneNo IPR availableTMHMMTMhelixcoord: 270..292
NoneNo IPR availableTMHMMTMhelixcoord: 486..505
NoneNo IPR availableTMHMMTMhelixcoord: 185..202
NoneNo IPR availableTMHMMTMhelixcoord: 311..333
NoneNo IPR availableTMHMMTMhelixcoord: 212..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig569contigH-paniculata_contig569:2639..9934 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig569.13235.1mRNA_H-paniculata_contig569.13235.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig569 2053..10121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig569.13235.1 ID=prot_H-paniculata_contig569.13235.1|Name=mRNA_H-paniculata_contig569.13235.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=589bp
MTEVVRPHEEATHTRKELNSLLRQVQTNTRKLEELIAVVRGLELAKATNK
KENVGDRGRGVTLATKPPVTLHRASATVPPLWAASVLHIQDAQSSLPNVD
IAADRSLSDSSRSVGDEEDPAPHIRDIPARGGRLAGSTKRNEEDTCHRTK
VEDKLRAYLPDSVYLWACGVKAAPEDEDVSATDMAAGWLTLFTQIMSYLA
LVLNSDDPEEGGSYSIFSVGLAMYLMVVIAAPDIRAGYTLLSFGRSALRR
TFGACLLCSMFLLVYASMRVLFAEASGNAELVIGAATVLFITDVDEKMMM
VLRTKHQQWRMFCVLETFGFSFWLALVGVLYLGDPGAISPLGTATSGGEF
ADNADLHYWVPSFFVFAFTPGTITCCALVLNNIVLKLGAARAAADVARLR
GLLWFFDFLSDWVREDPLFAGAWIVLLIDTMILGVSFSYTVITRRSTYRD
VSIVSGGVLAVAFIGGLVAFVARGMCGTSRSTRSRWATLCIGWGIGAAIG
VAVVSDTEPPSLRPYSLVGGLLVFSMGILAFADTGMLGWAICRNIKRFTS
VLQNTDGILYWAVMGSVDMCMASWITYVYLGITWGIIR*
back to top