prot_H-paniculata_contig56888.13232.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig56888.13232.1
Unique Nameprot_H-paniculata_contig56888.13232.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length200
Homology
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BLAST of mRNA_H-paniculata_contig56888.13232.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 5.530e-12
Identity = 49/130 (37.69%), Postives = 64/130 (49.23%), Query Frame = 0 
Query:   89 ARTLATLTVRIPTHVVLLPPRQNESEALREEEREERNWTERLKTWY----------NEGKKAG---------KGRTTKEFRLFFLCGHDNSLAECGLEGKGYRIETPRTWVKKSVPFAKALLVVLNITLK 199
            AR +A L   IP  V +LP R      L E +R    W+  LK W           N  +K           +G  T+E RLFFLCG D SLAECG +G+GY ++    WV+K+ P AK  L + +I LK
Sbjct:  880 AREVAILRWPIPRFVCVLPARDTR---LSESDRSFEKWSTALKEWCASKSPAKDAKNPNRKTSILGLNKPQLRGLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKAAPAAKIGLALASIALK 1006
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig56888.13232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUH6_ECTSI5.530e-1237.69LRR-GTPase of the ROCO family, incomplete sequence... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig56888contigH-paniculata_contig56888:55..1061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig56888.13232.1mRNA_H-paniculata_contig56888.13232.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig56888 55..1061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig56888.13232.1 ID=prot_H-paniculata_contig56888.13232.1|Name=mRNA_H-paniculata_contig56888.13232.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=200bp
SESQRANLNSCGNDSSSDFQAAVHSDADSEVLEELRKMQSSMPTIEDVKN
VVEESQKTATLEMAARMEEQRKELRRVAPHLSALLRETARTLATLTVRIP
THVVLLPPRQNESEALREEEREERNWTERLKTWYNEGKKAGKGRTTKEFR
LFFLCGHDNSLAECGLEGKGYRIETPRTWVKKSVPFAKALLVVLNITLKS
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