mRNA_H-paniculata_contig5684.13228.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5684.13228.1 vs. uniprot
Match: D7G629_ECTSI (Hypothetical leucine rich repeat calmodulin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G629_ECTSI) HSP 1 Score: 629 bits (1623), Expect = 7.960e-214 Identity = 438/729 (60.08%), Postives = 495/729 (67.90%), Query Frame = 1
Query: 10 MVGVSRARYCHNRKDPESTYLPME-VLYQLNDGAPRGDQLDLSSWGVCDDDMPAVAAVVTEGMDAKASTGGVTGLILDKCWRLTDQGIENLIASFLPQSHLAQRLETISLAGCSHLTNRSAFCIYQTFGGVLSLDISGTGITDDGLQLILGAGKVLRSLGLRDLPGLTDRGLAAVLQCIKNRRRLRDLQLCRSLRFTDSGLLAFLSAAGLLRTLAIHGCSQLSELCLMGLERAAFTSTHLRSLDVRGMEIADIGLSWVAQGCKLLESLNVSHCPLLTDLALEYLSKGSGEQKPVPLKTLNVSRVTAFTDEGMSLLLPRSGPTLEDLTLDGATSLG--------------------------------------------DGTVGCIAFNCPNLMCLSMVELTRTSDSSLRELGRRCPRLRLLDSSSDINVLETSHRTRVPKLGGGGVREGQL-SGYLAVLRLNGACKVTDDALVSVGANCPRLEELCIRSCNLVSDVGVCAVARGXXXXXXXXXWGCVRLTDLSVRAVAIRSGDGLRFXXXXXXXXXXXXXXEALSNNSKNLETLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEASASVAMVEKRXXXXXXXXXXXXXXXTGSRVELAGERLPLAIREKGTRQLRPCAPACRVFNAFVQERAEWTAVAIAVQRIVRGRLCRLRWMRGEQRKACATKTLREKLSATWARRLHRESCRRKRDEH 2058
M GV RAR+CHNRKD E TYLP + LY+LNDGAPR +LDLS WG+ D+DMP +A V +DAKA TGGVT L+LDKCWRLTD+G+E L FL Q+ R+E S+AGCS LT+ V+SLD+SGT ITDDG+QL+LGA KV+RSLGLRDLPGLTDRGL A+LQCIK RR+L++L+LCRSLRFTD GLLA LSA GLLRTL IHGCSQLSELCLMGL+RA FTST+LR LDVRGM IADI WVAQGCK+LE+LN+S CPLLTDLALEYL L+V+ V TD GMS+LLPRSGPTL D+TLDGATSLG DGTV IA +CP L LSMVELTRT LRLLDSSSDINVLETSHRTRVPKLGG GVRE L + L VLRLNGACK+TDD+L++VG+NC XXXXXXXXX SVR +A R+G GLR XXXXXXXXXX EA+ ++ + LE L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX +GSRV+LAGERLPL +RE GTR LRPCA CRVFN+++Q RAEWTA AI VQR +RG+LCRLRW RGEQRKA A LR KLSA ARRL R ++R EH
Sbjct: 1 MQGVQRARFCHNRKDVEDTYLPGDDALYRLNDGAPRDGRLDLSGWGIRDEDMPGIATVALANVDAKADTGGVTSLVLDKCWRLTDKGVEALAKPFLDQTTSPNRMEAFSVAGCSLLTDE-----------VVSLDVSGTAITDDGIQLLLGASKVVRSLGLRDLPGLTDRGLMAILQCIKRRRKLQNLELCRSLRFTDGGLLALLSAGGLLRTLDIHGCSQLSELCLMGLQRATFTSTNLRCLDVRGMAIADIAFGWVAQGCKVLENLNISRCPLLTDLALEYL-------------VLDVAGVGNLTDGGMSILLPRSGPTLRDITLDGATSLGMGKLVDRPTTSCIYYRRHSHHPFFNITHGNSTDRITTRHAPNTGDGTVRDIARHCPGLTSLSMVELTRTXXXXXXXXXXXXXLLRLLDSSSDINVLETSHRTRVPKLGGDGVRELSLGTPCLTVLRLNGACKITDDSLLAVGSNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVRVLAARAGGGLRVLDFXXXXXXXXXXLEAIGSHCRGLE--GLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGSRVQLAGERLPLVVREPGTRVLRPCALPCRVFNSYIQRRAEWTAAAITVQRTLRGKLCRLRWERGEQRKAWAAMVLRSKLSAVMARRLFRRRLEQRRSEH 703
BLAST of mRNA_H-paniculata_contig5684.13228.1 vs. uniprot
Match: A0A7S1TZ14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ14_9STRA) HSP 1 Score: 147 bits (370), Expect = 4.830e-33 Identity = 115/427 (26.93%), Postives = 202/427 (47.31%), Query Frame = 1
Query: 109 PRGDQLDLSSWGVCDDDMPAVAAVVTEGMDAKASTGGVTGLILDKCWRLTDQGIENLIASFLPQSHLAQRLETISLAGCSHLTNRSAFCIYQTFGGVLSLDISGTGITDDGLQLILGAGKVLRSLGLRDLPGLTDRGLAAVLQCIKNRRRLRDLQLCRSLRFTDSGLLAFLS-AAGLLRTLAIHGCSQLSELCLMGLERAAFTSTHLRSLDVRGME-IADIGLSWVAQGCKLLESLNVSHCPLLTDLALEYLSKGSGEQKPVPLKTLNVSRVTAFTDEGMSLLLPRSGPTLEDLTLDGATSLGDGTVGCIAFNCPNLMCLSMVELTRTSDSSLRELGRRCPRLRLLDSSSDINVLETSHRTRVPKLGGGGVRE-GQLSGYLAVLRLNGACKVTDDALVSVGANCPRLEELCIRSCNLVSDVGVCAVA 1380
P +D S + + D+D+ VAA + + L L + LTD + + A+ RL T+ L CS +T + + LD+SG I DDG+ ++ L +L L + L D + + Q IK+RR LR L L +++F++ L+ L+ G L +L + CSQL++LC+MGL+R S L L ++ M + D ++++ GCK LE L++ +C L+D L+YL++ L+ +N + +DEG + + ++G + + +GD + + L L ++R SD+ L +L C L +D S+DIN L+T+ ++RVP L G++ + L + G + + L + NC + L + C ++D G+ +A
Sbjct: 77 PLDGAIDFSFYAMRDEDVAVVAATCVDANE----------LTLQRNMYLTDAICDAITANMT-------RLHTLRLPHCS-ITLNGIKSLQSYLQHLYFLDLSGNDINDDGVYILSCNCVRLETLVLSECAALRDHSIQYIAQLIKSRRALRHLDLSGNIKFSNEVCLSLLAEGGGRLESLNLSNCSQLTDLCMMGLQRGRTHSMSLVKLVLQNMHTLHDSACNFISLGCKKLEELDLRNCLHLSDAGLQYLTRIQ------TLRRVNFAECPGISDEGFASFVEQAGARFSSVDVTSCIKIGDASFTMLGETSNFLSVLKANGVSRVSDAGLMKLADGCQLLTAIDCSADINTLDTTTQSRVPSLSQRGLKALFKKCPQLTEVNFLGVHRFDNGILKLMAKNCAGVLRLNVHGCFTLTDEGIARLA 479
BLAST of mRNA_H-paniculata_contig5684.13228.1 vs. uniprot
Match: A0A0P1AHX6_PLAHL (F-box protein containing LRR n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHX6_PLAHL) HSP 1 Score: 80.5 bits (197), Expect = 9.840e-12 Identity = 92/372 (24.73%), Postives = 166/372 (44.62%), Query Frame = 1
Query: 118 DQLDLSSWGVCDDD-MPAVAAVVTEGMDAKASTGGVTGLILDKCWRLTDQGIENLIASFLPQSHLAQRLETISLAGCSHLTN---RSAFCIYQTFGGVLSLDISGTGITDDGLQLILGAGKVLRSLGLRDLPGLTDRGLAAVLQCIKNRRRLRDLQLCRSLRFTDSGLLAFLSAAGLLRT------------LAIHGCSQLSELCLMGLERAAFTSTHLRSLDVRGMEIADIGLSWVAQGCKLLESLNVSHCPLLTDLALEYLSKGSGEQKPVPLKTLNVSRVTAFTDEGMS---LLLPRSGPTLED---------LTLDGATSLGDGTVGCIAFNCPNLMCLSMVELTRTSDSSLRELGRRCPRLRLLDSS 1149
D +DL ++ + ++ + A+A+ EG AS + G +TD GI +L + + L ++ ++ C LT+ + C + +L D + GL + K L+++ R PG+TD +VL C+ N +R L RF D +++AG+ LA+ C L + + E ++ + L+SL ++G++I + ++W+ +GCK L+ L+V C L++D AL ++ P+ LN+S TD G+ LL + G + +D L L +GD + + C NL+ L++ L + SD + ++ + CP LR L S
Sbjct: 3 DTVDLRNFKIASNEWVRAIASHAAEG-STSASKFVLAGT------SITDIGISHL--------YRIKALTSLDISSCHLLTDDCLNTIGCHLRFLHDLLLNDCRR--FSSAGLCKVWKNCKRLQTISARRCPGVTD----SVLTCLANTKRTSSYPL----RFLDIRQCKNVTSAGISHLANSVVDSIAMFHLAVDDCLGLRNMAFLEFETSS-SLCLLKSLSLKGLDIDETAINWIVKGCKSLQRLDVGRCKLISDFALTLMAPLISS--PI-FAELNLSECPLLTDMGIQNLFLLEEKKGFSDDDDIPQMSIAMLNLKQCFIIGDEAMVYVGKYCGNLVKLNIKGLKKVSDRGISDIAKGCPLLRKLSMS 345
BLAST of mRNA_H-paniculata_contig5684.13228.1 vs. uniprot
Match: UPI001CF4633F (F-box/LRR-repeat protein 3-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF4633F) HSP 1 Score: 78.6 bits (192), Expect = 2.240e-11 Identity = 110/450 (24.44%), Postives = 178/450 (39.56%), Query Frame = 1
Query: 289 FLPQSHLAQRLETISLAGCSHLTNRSAFCIYQTFGGVLSLDISGTG-ITDDGLQLILGAGKVLRSLGLRDLPGLTDRGLAAVLQCIKNRRRLRDLQLCRSLRFTDSGLLAFLSAAGLLRTLAIHGCSQLSELCLMGLERAAFTSTHLRSLDVRGME----------------------------IADIGLSWVAQGCKLLESLNVSHC----------------PL-LTDLALEYLSKGSG-----EQKPVPLKTLNVSRVTAFTDEGMSLLLPRSGPTLEDLTLDGATSLGDGTVGCIAFNCPNLMCLSMVELTRTSDSSLREL---GRRCPRLRLLDS------SSDINVLETSHRTRVPKLGGGGVREGQLSGYLAVLRLNGACKVTDDALVSVGANCPRLEELCIRSCNLVSDVGVCAVARGXXXXXXXXXWGCVRLTDLSVRAVA 1458
++ + L RL+ I+L + + C+ Q+ + S + +TD GL +L + L L L+ GLT L + + +L ++L + T+SG++ + + L + C+ LS+ C L A + L LD+ G+ I+ +GL VAQGC L L++ +C P+ LT+L L + + K V +K L + + A D+ + + G TL L L G SL D + I+ +C + L + + L+ L RR P + + S D+ +H P L LRL G +V D+ L +V NC +L + I+ C LVSDVG+C +AR G +LTD SV A+A
Sbjct: 52 YVTRQLLTSRLKNIALRYSRQVNDNLLHCVAQSGCKLKSFTLLECAKVTDKGLSYLLKSQTELEFLHLK--LGLTHVNLTDKSLAVLHSPKLTSVKLEALDQVTNSGIITLVKNCPNICMLMVPRCNSLSDGCFQTL--VALSKGKLEVLDISGVHLLTDLTLTAIGSGSCPKLRELTLNGCTMISGLGLQQVAQGCPQLSCLDIGYCYRILKTGTLSVGADAFPVKLTELTLHGVQMSASLLTELVAKLVYIKVLTLCGMAALDDDTLDKICLAVGRTLTSLDLSGC-SLTDSGLSTISKHCQVIESLKVSFCPNITGMKLKPLFTCPRRAPDFKTFVANGCKMFSVDLIAEIAAH---CPSL--------------LNLRLAGIREVDDELLTAVAENCRQLSSVSIKGCGLVSDVGICELARMCPLEEIVIS-GVSKLTDRSVLALA 478
BLAST of mRNA_H-paniculata_contig5684.13228.1 vs. uniprot
Match: A0A2B4RY09_STYPI (F-box/LRR-repeat protein 4 n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4RY09_STYPI) HSP 1 Score: 68.9 bits (167), Expect = 2.350e-8 Identity = 105/443 (23.70%), Postives = 172/443 (38.83%), Query Frame = 1
Query: 220 VTGLILDKCWRLTDQGIENLIASFLPQSHLAQRLETISLAGCSHLTNRSAFCIYQTFGGVLSLDISGTGITDDGLQLILGAGKVLRSLGLRDLPGLTDRGLAAVLQCIKNRRRLRDLQLCRSLRFTDSGLLAFLSAAGLLRTLAIHGCSQLSELCLMGLERAAFTSTHLRSLDVRGMEIADIGLSWVAQGCKLLESLNVSHC-----------------PLLTDLALEYLSKGSG-----EQKPVPLKTLNVSRVTAFTDEGMSLLLPRSGPTLEDLTLDGATSLGDGTVGCIAFNCPNLMCLSMVELTRTSDSSLRELGRRCPRLRLLDSSSDINVLETSHRTRVPKLGGGGVREGQLSGYLAVLRLNGACKVTDDALVSVGANCPRLEELCIRSCNLVSDVGVCAVARGXXXXXXXXXWGCVRLTDLSVRAVAIRSGDGLR 1482
++ +L C +++D+G+ +L+ + L +L + SHLT++ + + + LD ++++G+ + + L L GL D + V + + + +L L+L TD L A S C +L EL L+G I+ GL V QGC L SL++ +C L +L L + S +K +K L + + A D+ + + +G +L L L G L D + I+ C + L + + SL+ L CP+ + N + + ++ L VLRL G V D L +V NC ++ L I+ C LVSDVGVC +AR G LTD SV A+A G L+
Sbjct: 88 LSSFVLKNCPQVSDKGLSSLLKTQTDLELLHLKLSSYH----SHLTDKCLSTLRSSKLVSVKLDHIDQ-LSNNGIITLAKNCPNICELMLPRCKGLNDNCIETVTRTLL-KGKLEVLELSEIHLLTDLSLFAIGSG----------DCPKLRELLLVGCNM-----------------ISGAGLLQVTQGCPNLTSLDIGYCYRILNDGRSLVGANAFPSNLMELTLHGVQMSSELLIDLVEKLDYIKELTLCGMKAVDDDSLEKICSAAGRSLRSLDLSGCAVLTDAGLSAISKQCLAIESLKVSFCPNITGKSLKSLFH-CPKRGQEFKAFVANGCKMFSVDVITEIAAS-------CPSLLVLRLAGMKDVDDQLLTAVAENCHQITRLSIKGCGLVSDVGVCELARMCPLEEVVVS-GVSGLTDRSVFALANCCGSTLK 488
BLAST of mRNA_H-paniculata_contig5684.13228.1 vs. uniprot
Match: A0A024UG96_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UG96_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 7.320e-8 Identity = 91/361 (25.21%), Postives = 153/361 (42.38%), Query Frame = 1
Query: 82 VLYQLNDGAPRGDQLDLSSWGVCDDDMPAVAAVVTEGMDAKASTGGVTGLILD-----------KCWRLTDQGIENLI----ASFLPQSHLAQRLETISLAGCSHLTNRSAFCIYQTFGGVLSLDISGT-GITDDGLQLILGAGKVLRSLGLRDLPGLTDRGLAAVLQCIKNRRRLRDLQLCRSLRFTDSGLLAFLSAAGL-LRTLAIHGCSQLSELCLMGLERAAFTSTH-------LRSLDVRGME-IADIGLSWVAQGCKLLESLNVSHCPLLTDLALEYLSKGSGEQKPVPLKTLNVSRVTAFTDEGMSLLLP--RSGP--TLEDLTLDGATSLGDGTVGCIAFNCPNLMCLSMVEL 1077
V Y+ PR +DLS+W D ++ V A +T+ + ++ ++GL D KC RLT ++ + A++ HL LE + LA +T+ + F + +LD S ITD GL +L L S+ + P LT+R L + R L+ L + + TD+ + + A + LR L + QL++ L T T + LD+ G + + + LSW+A GC +L SLN++ C + D L Q L+ L ++ TD + +L R P T+ L G +S T+ I +C ++ L + ++
Sbjct: 199 VFYEPFSTTPRA-WIDLSAWTAMDGNV--VLAQLTKHLTKSCTSLNLSGLQGDIAVDVVHACFTKCPRLTTLVLDEVAGLPTAAYKTIGHLCLCLEHLHLAKSHDVTDDLLRVMSSAFPNLKTLDFSHCQDITDAGLACVLKKTPRLVSVSVAGCPYLTERALTQLASTCG--RTLQSLNVSDLAKTTDNVVASLALAKPIVLRVLRLRNARQLTDAAFEALVHPPQTFTQAVAVAYTIDKLDLTGCDGLTGLALSWIAAGCPVLRSLNLTGCSRINDKGFRAL------QGCAHLQKLRLANCPLITDAAVVPVLAATRRHPWATIAFLQCPGISS---ATIAAIGDHCRHVTSLVLSDI 545
BLAST of mRNA_H-paniculata_contig5684.13228.1 vs. uniprot
Match: UPI000B8C78EC (uncharacterized protein LOC110809259 isoform X1 n=2 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C78EC) HSP 1 Score: 65.9 bits (159), Expect = 2.580e-7 Identity = 67/267 (25.09%), Postives = 125/267 (46.82%), Query Frame = 1
Query: 427 ITDDGLQLILGAGKVLRSLGLRDLPGLTDRGLAAVLQCIKNRRRLRDLQLCRSLRFTDSG-LLAFLSAAGLLRTLAIHGCSQLSELCLMGLERAAFTSTHLRSLDVRGME-IADIGLSWVAQGCKLLESLNVSHCPLLTDLALEYLSKGSGEQKPVPLKTLNVSRV--TAFTDEGMSLLLPRSGPTLEDLTLDGATSLGDGTVGCIAFNCPNLMCLSMVELTRTSDSSLRELGRRCPRLRLLD---SSSDINVLETSHRTRVPKLGG 1206
+TD GL + + L+S+ LR LT + A+ ++ R L C+++ D+G +L L L L++ G + + ++G+ A +++ L + D L V + C L +L++SH LTD A++Y++ G ++++V ++ +F+DE ++ LL G +L +L+L+ + +GD T +A NL L + ++ ++R + C LRLL S NV H + K+ G
Sbjct: 459 LTDAGLTALFASAPALQSINLRSCSLLTASAINALTSNYESTLRELYLDDCQNI---DAGHILPALKKLKALEVLSVAGIETVCDDFVIGMVEAC--GVNMKELSFANCRALTDNSLENVGKYCHRLCALDLSHLHNLTDSAIKYIANGC--------QSIHVLKLCHNSFSDEAIAALLEVLGDSLNELSLNKISRIGDATALSLAKCSRNLCSLDLSWCRNLTEVAVRLIVDSCLSLRLLKLFGCSQITNVFWNGHSNPIVKIVG 712
BLAST of mRNA_H-paniculata_contig5684.13228.1 vs. uniprot
Match: UPI00077A7FF9 (F-box/LRR-repeat protein 2-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A7FF9) HSP 1 Score: 64.7 bits (156), Expect = 2.820e-7 Identity = 73/263 (27.76%), Postives = 109/263 (41.44%), Query Frame = 1
Query: 754 IADIGLSWVAQGCKLLESLNVSHC----------------PL-LTDLALEYLSKGSG-----EQKPVPLKTLNVSRVTAFTDEGMSLLLPRSGPTLEDLTLDGATSLGDGTVGCIAFNCPNLMCLSMVELTRTSDSSLREL---GRRCPRLR--LLDSSSDINV-LETSHRTRVPKLGGGGVREGQLSGYLAVLRLNGACKVTDDALVSVGANCPRLEELCIRSCNLVSDVGVCAVARGXXXXXXXXXWGCVRLTDLSVRAVA 1458
I+ +GL VAQGC L L++ +C P+ LT+L L + + K V +K L + + A D+ + + G TL L L G SL D + I+ +C + L + + L+ L +R P + + D +V L P L LRL G +V D+ L +V NC +L + I+ C LVSDVG+C +AR G +LTD SV A+A
Sbjct: 45 ISGLGLQQVAQGCPQLSCLDIGYCYRILKTGTLSVGADAFPVKLTELTLHGVQMSASLLTELVAKLVYIKVLTLCGMAALDDDTLDKICLAVGRTLTSLDLSGC-SLTDSGLSTISKHCQVIESLKVSFCPNITGMKLKPLFTCPQRAPDFKTFVADGCKMFSVDLIAEIAAHCPSL--------------LNLRLAGIREVDDELLTAVAENCRQLSSVSIKGCGLVSDVGICELARMCPLEEIVIS-GVSKLTDRSVLALA 291
BLAST of mRNA_H-paniculata_contig5684.13228.1 vs. uniprot
Match: A0A540LMW7_MALBA (MHD domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540LMW7_MALBA) HSP 1 Score: 64.7 bits (156), Expect = 6.250e-7 Identity = 51/158 (32.28%), Postives = 77/158 (48.73%), Query Frame = 1
Query: 595 TDSGLLAFLSAAGLLRTLAIHGCSQLSELCLMGLERAAFTSTHLRSLDVRGMEIADIGLSWVAQGCKLLESLNVSHCPLLTDLALEYLSKGSGEQKPVPLKTLNVSRVTAFTDEGMSLLLPRSGPTLEDLTLDGATSLGDGTVGCIAFNCPNLMCLSM 1068
+D+G+ A L L++ CS +S + GL A L+SLD++G + D GL+ V + CK LE LN+ C LTD+ + L+ G G LK+L ++ TD M + +LE+L+LD G V +A CP L L +
Sbjct: 122 SDAGMTAIGDGFPKLEKLSLIWCSSVSSI---GLTSLADKCKLLKSLDLQGCYVGDQGLAAVGKCCKQLEDLNLRFCEGLTDVCVVELALGVGNS----LKSLGIAACAKITDAAMEAVGVHC-KSLENLSLDAEFIHNKGVVS-VAQGCPALKSLKL 270
BLAST of mRNA_H-paniculata_contig5684.13228.1 vs. uniprot
Match: W9S2U2_9ROSA (F-box/LRR-repeat protein 4 n=1 Tax=Morus notabilis TaxID=981085 RepID=W9S2U2_9ROSA) HSP 1 Score: 63.9 bits (154), Expect = 8.990e-7 Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 1
Query: 520 LAAVLQCIKNRRRLRDLQLCRSLRFTDSGLLAFLSAAGLLRTLAIHGCSQLSELCLMGLERAAFTSTHLRSLDVRGMEIADIGLSWVAQGCKLLESLNVSHCPLLTDLALEYLS 861
++++ QC + + D + S F+DSGL+A L L++ CS +S L+ L A T+L+SLD++G + D+GL+ V + CK LE LN+ C LTD+ L L+
Sbjct: 100 VSSLNQCAFEKNGIEDAEF-ESSHFSDSGLIALGEGLPKLEKLSLIWCSNVSSAGLISL---ANKCTYLKSLDLQGCYVGDLGLAAVGKSCKQLEDLNLRFCEGLTDMGLVELA 209 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5684.13228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5684.13228.1 >prot_H-paniculata_contig5684.13228.1 ID=prot_H-paniculata_contig5684.13228.1|Name=mRNA_H-paniculata_contig5684.13228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=794bp MVGVSRARYCHNRKDPESTYLPMEVLYQLNDGAPRGDQLDLSSWGVCDDDback to top mRNA from alignment at H-paniculata_contig5684:436..11251- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5684.13228.1 ID=mRNA_H-paniculata_contig5684.13228.1|Name=mRNA_H-paniculata_contig5684.13228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10816bp|location=Sequence derived from alignment at H-paniculata_contig5684:436..11251- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5684:436..11251- >mRNA_H-paniculata_contig5684.13228.1 ID=mRNA_H-paniculata_contig5684.13228.1|Name=mRNA_H-paniculata_contig5684.13228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4764bp|location=Sequence derived from alignment at H-paniculata_contig5684:436..11251- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |