prot_H-paniculata_contig5682.13226.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5682.13226.1
Unique Nameprot_H-paniculata_contig5682.13226.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length379
Homology
BLAST of mRNA_H-paniculata_contig5682.13226.1 vs. uniprot
Match: A0A6H5L8U0_9PHAE (KH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8U0_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 4.670e-30
Identity = 143/310 (46.13%), Postives = 161/310 (51.94%), Query Frame = 0
Query:  113 DNEELPACLADILDSFFGG--------------------------------SSSGVAAP-RSPSTITGIDVEVGRAAFALLGVRDLDDIKHLSGAGIVAPESPESYCHLSGEVVAAAAAAVLSAAARGTAPADGLGLXXXXXXXXXXXXXXXXXXXXXXXSGDSFPSPGSSPSVVTFNSLGSRIELALT---------EGFGKEDSVAANAANKATRSEFGFAAGTGAASVKPVG--MGXXXXXPPFTPLXXXXXXXXXXXXXXXDDDYGGSSDAHNALKTVRITGTAEEVQLAEYLIRVRTAGRYMVAA 378
            D+ ELP+CL  ILDSF GG                                +++G A P RSPSTITGI++EVGR+AFA LG R LDDIK LSGAGI APESPE YCHLS E +AA  A V S+AARG AP DG+GL  XXXXXXXXXXXXXXXXXXXXX                                      EGFG ++ V  N    A  +    AA TG  S   +G  M XXXXX                   XX       +   N+LKTV+ITGTAEEVQLAEYLIRVRT G  M AA
Sbjct:  518 DDGELPSCLVGILDSFLGGGGKSYVSDGNGIRSGSGNXGSVGNSNANEKNGNNNGAAPPLRSPSTITGIEMEVGRSAFARLGERGLDDIKDLSGAGISAPESPEGYCHLSDEALAAMGA-VYSSAARGNAPCDGVGLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPFEGFGLKEGVRGNMGGGAATTPGAIAAVTGGVSRLGLGTTMSXXXXXXXXVSPSLASAVGQVSGGLXXXXXXXXXTAGPNSLKTVKITGTAEEVQLAEYLIRVRTTGGNMAAA 826          
BLAST of mRNA_H-paniculata_contig5682.13226.1 vs. uniprot
Match: D8LKQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ3_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 1.570e-28
Identity = 142/299 (47.49%), Postives = 158/299 (52.84%), Query Frame = 0
Query:  113 DNEELPACLADILDSFFGG-------------SSSG----------------VAAP--RSPSTITGIDVEVGRAAFALLGVRDLDDIKHLSGAGIVAPESPESYCHLSGEVVAAAAAAVLSAAARGTAPADGLGLXXXXXXXXXXXXXXXXXXXXXXXSGDSFPSPGSSPSVVTFNSLGSRIELALTEGFGKEDSVAANAANKATRSEFGFAAGTGAAS--VKPVGMGXXXXXPPFTPLXXXXXXXXXXXXXXXDDDYGGSSDAHNALKTVRITGTAEEVQLAEYLIRVRTAGRYMVAA 378
            D+ ELP+CL  ILDSF GG             S SG                 AAP  RSPSTITGI++EVGR+AFA LG R LDDIK LSGAGI APESPE Y HLS E  AAA  AV S+AARG AP DG+GL    XXXXXXXXXXXXXXXXXXX                             EGF   + V  N ++ A  +    AA TG  S  V      XXXXX   +P              XX      ++   N+LKTV+ITGTAEEVQLAEYLIRV T G  M AA
Sbjct:  123 DDGELPSCLVGILDSFLGGGGKSYVSDGNSIRSGSGGXXXXXXXXXXXXXXXXAAPPLRSPSTITGIEMEVGRSAFARLGERGLDDIKDLSGAGISAPESPEGYYHLSDEA-AAAMGAVYSSAARGNAPCDGVGLAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSSPF-EGFRLREGVRGNMSDGAATTPGAIAAVTGGVSRLVLDTTNSXXXXXNGVSPSLASAVGHVSGGLAXXXXXXXXTA-GPNSLKTVKITGTAEEVQLAEYLIRVSTTGGNMAAA 418          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5682.13226.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8U0_9PHAE4.670e-3046.13KH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LKQ3_ECTSI1.570e-2847.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5682contigH-paniculata_contig5682:8099..9499 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5682.13226.1mRNA_H-paniculata_contig5682.13226.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5682 8090..9499 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5682.13226.1 ID=prot_H-paniculata_contig5682.13226.1|Name=mRNA_H-paniculata_contig5682.13226.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=379bp
MSRSGSGSGRLSASSSPDLASSSASGSPGSGSLGSAEGLVGSAAADAPAI
ITQLSLGTSAASSTGGGGAVPSIIEATRTPNGATGSSGSGSGSGSGGDGG
GAHGVLEGSSYIDNEELPACLADILDSFFGGSSSGVAAPRSPSTITGIDV
EVGRAAFALLGVRDLDDIKHLSGAGIVAPESPESYCHLSGEVVAAAAAAV
LSAAARGTAPADGLGLAAAESNAVASAAAAAAAATTTTTSGDSFPSPGSS
PSVVTFNSLGSRIELALTEGFGKEDSVAANAANKATRSEFGFAAGTGAAS
VKPVGMGTGNGSPPFTPLPGYGVGMGVGGGGGGDDDYGGSSDAHNALKTV
RITGTAEEVQLAEYLIRVRTAGRYMVAA*
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