prot_H-paniculata_contig5682.13225.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5682.13225.1
Unique Nameprot_H-paniculata_contig5682.13225.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length268
Homology
BLAST of mRNA_H-paniculata_contig5682.13225.1 vs. uniprot
Match: D8LKQ4_ECTSI (Poly(Rc) binding protien (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ4_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 4.820e-100
Identity = 196/275 (71.27%), Postives = 205/275 (74.55%), Query Frame = 0
Query:    1 MFVGSPTVVAHSGGCGXXXXXXE----GNTGPETVSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHDDADDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREHSGARIEISSHAFHFHPIHGPLPAPSMXXXXXXXXXXXTGLGPSS---HGPVTSGXXXXXPRVVGPVGNGFGXXXXXXXXXXXHSGSKGPDHRIIDRNNIILPPAILMDRVLTAMGSFDA 268
            MF GSP      GG G XXXXX     G+ G ETVSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLH D+DDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIRE SGARIEISSHAFHFHP+HGPLPAP              G GP S   HG + +G     PR  GP      XXXXXXXXXX      GP         I LP  +LMDRV+TAMGS++A
Sbjct:   70 MFGGSPGTCG--GGMGLXXXXXXXXXGGSLGMETVSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHGDSDDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISSHAFHFHPVHGPLPAPPHHPPTPQAGGPGPG-GPQSSSIHGGLPNGDGG--PRGGGPGVGXSXXXXXXXXXXXPAEREGGPPA------GIPLPLPMLMDRVMTAMGSYNA 333          
BLAST of mRNA_H-paniculata_contig5682.13225.1 vs. uniprot
Match: A0A6H5L8U0_9PHAE (KH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8U0_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 2.520e-54
Identity = 130/191 (68.06%), Postives = 134/191 (70.16%), Query Frame = 0
Query:   80 MVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREHSGARIEISSHAFHFHPIHGPLPAPSMXXXXXXXXXXXTGLGPSS--HGPVTSGXXXXXPRVVGPVGNGFGXXXXXXXXXXXHSGSKGPDHRIIDRNNIILPPAILMDRVLTAMGSFDA 268
            MVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIRE SGARIEISSHAFHFHP+HGPLPAP          XXX         HG +  G    X            XXXXXXXXXX      GP         I LP  +LMDRV+TAMGSFDA
Sbjct:    1 MVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISSHAFHFHPVHGPLPAPPHHTPTPQAGXXXXXXXXXXXIHGGLPHGDGGPXXXXXXXXXXXXXXXXXXXXXXXPAEREGGPPA------GIPLPLPMLMDRVMTAMGSFDA 185          
BLAST of mRNA_H-paniculata_contig5682.13225.1 vs. uniprot
Match: A0A836CIH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH4_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.990e-30
Identity = 87/174 (50.00%), Postives = 104/174 (59.77%), Query Frame = 0
Query:   25 NTGPETVSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDS------CTGLHDDADDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLA--------GGDPDCVANS--------FRLLIPNVKAGGLIGRGGCTIKAIREHSGARIEISSHAFHFHPIHGPLPAP 176
            N   E VSRVLIPN KIGAVIGKGGAI+KHIRE SGA+VTISD+        G      +R+V   G+F +V  A   IL+HA     + +P+ GLA         G+     ++        FR+LIPN KAG LIGRGG TIKAIR+ SGARIEISSH      + G LPAP
Sbjct:  101 NASSEAVSRVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLVHLVGSFGAVVAALGAILAHA-ETPSNGEPLPGLAQLVAGGLLSGEAAAAVDAAITVPPSAFRMLIPNAKAGALIGRGGTTIKAIRDASGARIEISSH------LAGNLPAP 267          
BLAST of mRNA_H-paniculata_contig5682.13225.1 vs. uniprot
Match: A0A835Z8V5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V5_9STRA)

HSP 1 Score: 118 bits (295), Expect = 2.450e-26
Identity = 82/172 (47.67%), Postives = 101/172 (58.72%), Query Frame = 0
Query:   29 ETVSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDS------CTGLHDDADDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAG--------GDPDCVA----------NSFRLLIPNVKAGGLIGRGGCTIKAIREHSGARIEISSHAFHFHPIHGPLPAP 176
            E +SRVLIPN KIGAVIGKGGAI+KHIRE SGA+VTISD+        G      +R++   G+F +V  AF  IL+HA     + DP+ GLA         G+    A          + FR+LI + KAG LIGR G TIKAIR+ SGARI+ISSH      + G LP P
Sbjct:  293 EAMSRVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLLHIIGSFFAVVTAFGAILAHA-ETPSNGDPLPGLAALVASGMLSGEATSAAALEAALPLPPSGFRMLISSAKAGALIGRAGATIKAIRDASGARIDISSH------LAGGLPVP 457          
BLAST of mRNA_H-paniculata_contig5682.13225.1 vs. uniprot
Match: A0A8J2T296_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T296_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.480e-15
Identity = 51/134 (38.06%), Postives = 77/134 (57.46%), Query Frame = 0
Query:   33 RVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDS-----CTGLHDDADDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREHSGARIEISS 161
            ++L+P+   G VIGKGGA++ HIR+ SG +V + +S       G      +R++T +G F SV  AF  +L H  A  P ADP++      P  V     +L+P  K GGLIGRGG +I  +R+ SGA +++ +
Sbjct:  102 KLLLPHAACGIVIGKGGAMVSHIRDASGCQVDVQESPAPPPMAGGVQGGSERIITLSGDFGSVYAAFQMVLQHLAAAQP-ADPLLTTR--PPGSV--EAVVLVPRNKTGGLIGRGGASINRVRQDSGATVKVGA 230          
BLAST of mRNA_H-paniculata_contig5682.13225.1 vs. uniprot
Match: A0A0D6QYY3_ARACU (Uncharacterized protein n=3 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6QYY3_ARACU)

HSP 1 Score: 78.2 bits (191), Expect = 1.090e-12
Identity = 53/141 (37.59%), Postives = 75/141 (53.19%), Query Frame = 0
Query:   25 NTGPETVSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHDDADDRMVTAAG------TFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREHSGARIEI 159
            ++G E V RVL PN KIG VIGKGG+IIK +R+  G K+ ++D   G    +DDR++  +         +  Q A  HI +    +GPD D V+            + RLL+P  + G LIG+GG  I  +R  +GA I I
Sbjct:  304 SSGEEIVFRVLCPNKKIGGVIGKGGSIIKSLRDEIGVKIKVTDVVPG----SDDRIIIISSHEVPEEDLSPAQEALLHIQTQIVDLGPDKDGVI------------TTRLLVPANQVGCLIGKGGSIISEMRRATGANIRI 428          
BLAST of mRNA_H-paniculata_contig5682.13225.1 vs. uniprot
Match: A0A7S3JWP9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWP9_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 3.380e-12
Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 0
Query:   32 SRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHDDA---DDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREHSGARIEISS 161
            +++LIPN K+G VIGKGGA+I HIRE S A + I++     ++ +    +R++T  G F +V  AF  +  H        DP        P  +  +  +L+P  K GGLIGR G +I  +R  SGA +++ +
Sbjct:  158 AKLLIPNTKVGIVIGKGGAMINHIRESSKASLDIAEPGQQNNNQSALPQERVLTFNGDFAAVYTAFQMVQQHLSVASQQQDPNNSTVV-PPSLIETT--ILVPRNKTGGLIGRSGASINRVRNDSGATVKVGA 287          
BLAST of mRNA_H-paniculata_contig5682.13225.1 vs. uniprot
Match: A0A197JCP8_9FUNG (Uncharacterized protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JCP8_9FUNG)

HSP 1 Score: 75.5 bits (184), Expect = 4.050e-12
Identity = 50/132 (37.88%), Postives = 72/132 (54.55%), Query Frame = 0
Query:   28 PETVSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHDDADDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGD--PDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREHSGARI 157
            P T  R L+   + G +IGK G  +K IRE+SGA+V IS+   G    A +R++T  G  ++V  AF+ I             +   AGGD  P+  + + R+L  N K G +IG+GG  IK ++E SGARI
Sbjct:   11 PVTTIRALVSTKEAGVIIGKSGKNVKDIRELSGARVNISEMIPG----AVERVLTVVGPLDAVAKAFSLIAKTT---------IAEQAGGDVEPESESTTMRILAGNHKMGSVIGKGGSKIKEVQEASGARI 129          
BLAST of mRNA_H-paniculata_contig5682.13225.1 vs. uniprot
Match: A0A7S4F4T8_CHRCT (Hypothetical protein (Fragment) n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F4T8_CHRCT)

HSP 1 Score: 74.7 bits (182), Expect = 5.070e-12
Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 0
Query:   23 EGNTGPETVSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHDDADDRMVTAAGTFNSVQLA---FTHILSHAGAVGPDA-----DPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREHSGARIEISS 161
            EG      V R++IPN ++G +IGKGGA IK IRE+SG K+ I+D   G    + +R+V+  G+   V  A      ++   G+   D      +P M   G      +++ +L++ N + GG+IG+GG  IK +RE SGA I++ +
Sbjct:   30 EGAQEETMVLRLMIPNTQVGTIIGKGGANIKGIRELSGCKMQIADMVIG----STERLVSITGSVTGVTKAVELMLGVIEEPGSKTSDGGSSALNPEMASEGTGQ---SHTLKLVLNNNQVGGIIGKGGSMIKQMREESGAFIKVEA 169          
BLAST of mRNA_H-paniculata_contig5682.13225.1 vs. uniprot
Match: A0A8J9SBP1_9CHLO (Poly(RC)-binding protein 3 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SBP1_9CHLO)

HSP 1 Score: 72.8 bits (177), Expect = 2.650e-11
Identity = 51/145 (35.17%), Postives = 77/145 (53.10%), Query Frame = 0
Query:   23 EGNTGPETVSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHDDADDRMVTAAGTFN------SVQLAF--THILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREHSGARIEI 159
            EG  G ETV R+L+ + K+G+VIGK GAI+K IR+ +GA++ + +       + D+R++  +G  +      S Q A    H   H    GP+  P              + R+L+ + +AG LIG+ G  IK IRE SGA I+I
Sbjct:   85 EGPPGAETVYRLLVQSKKVGSVIGKAGAIVKQIRDETGARIRVVEGVP----NCDERVIVISGRVDPGRHTDSAQEALYKVHARVHETEDGPNGPPANA-----------TTRMLVCHTQAGCLIGKAGAIIKEIREASGAHIKI 214          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5682.13225.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKQ4_ECTSI4.820e-10071.27Poly(Rc) binding protien (Partial) (Fragment) n=1 ... [more]
A0A6H5L8U0_9PHAE2.520e-5468.06KH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A836CIH4_9STRA1.990e-3050.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z8V5_9STRA2.450e-2647.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2T296_9STRA1.480e-1538.06Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A0D6QYY3_ARACU1.090e-1237.59Uncharacterized protein n=3 Tax=Araucariaceae TaxI... [more]
A0A7S3JWP9_9STRA3.380e-1235.34Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A197JCP8_9FUNG4.050e-1237.88Uncharacterized protein n=1 Tax=Linnemannia elonga... [more]
A0A7S4F4T8_CHRCT5.070e-1234.69Hypothetical protein (Fragment) n=2 Tax=Chrysotila... [more]
A0A8J9SBP1_9CHLO2.650e-1135.17Poly(RC)-binding protein 3 n=1 Tax=Coccomyxa sp. O... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 122..264
e-value: 6.2E-5
score: 32.4
coord: 28..102
e-value: 1.0E-12
score: 58.3
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 122..169
e-value: 9.8E-12
score: 46.2
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 26..103
e-value: 7.1E-18
score: 66.0
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 20..100
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 125..163
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 126..160
e-value: 4.6E-9
score: 36.0
coord: 32..98
e-value: 1.6E-13
score: 50.3
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 27..159
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 29..97
score: 15.934
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 123..159
score: 12.349

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5682contigH-paniculata_contig5682:4420..7579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5682.13225.1mRNA_H-paniculata_contig5682.13225.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5682 3847..7579 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5682.13225.1 ID=prot_H-paniculata_contig5682.13225.1|Name=mRNA_H-paniculata_contig5682.13225.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=268bp
MFVGSPTVVAHSGGCGGGGGGGEGNTGPETVSRVLIPNCKIGAVIGKGGA
IIKHIREVSGAKVTISDSCTGLHDDADDRMVTAAGTFNSVQLAFTHILSH
AGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIR
EHSGARIEISSHAFHFHPIHGPLPAPSMSPPPPPPHGGGTGLGPSSHGPV
TSGGPGPGPRVVGPVGNGFGPGGAGGGPNGNHSGSKGPDHRIIDRNNIIL
PPAILMDRVLTAMGSFDA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1