mRNA_H-paniculata_contig56783.13218.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig56783.13218.1 vs. uniprot
Match: D8LK98_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK98_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 2.390e-22 Identity = 44/54 (81.48%), Postives = 50/54 (92.59%), Query Frame = 1
Query: 1 LDRQGRGGMSAVHLAAFHGYSDALEILLEAGADPNAVCDDGETPLHTACTGGSM 162
L+R GRGGMSAVHLAAFHGY+D+L +LLEAG+DPNAV DDGETPLHTAC GGS+
Sbjct: 986 LNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTACNGGSI 1039
BLAST of mRNA_H-paniculata_contig56783.13218.1 vs. uniprot
Match: A0A3Q2E6M1_CYPVA (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like n=6 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2E6M1_CYPVA) HSP 1 Score: 59.3 bits (142), Expect = 1.550e-8 Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 1
Query: 4 DRQGRGGMSAVHLAAFHGYSDALEILLEAGADPNAVCDDGETPLHTACTGGSMNCVTLLLNYG 192
D +S +HLAA HG+S ALE+LL + D + DG TPL AC+ G CV+LLL++G
Sbjct: 587 DSDCEASLSPLHLAANHGHSGALEVLLASLLDVDVRTPDGRTPLSLACSRGHQECVSLLLHHG 649
BLAST of mRNA_H-paniculata_contig56783.13218.1 vs. uniprot
Match: A0A4Q4Y4A9_9PEZI (Uncharacterized protein n=1 Tax=Monosporascus sp. 5C6A TaxID=2211642 RepID=A0A4Q4Y4A9_9PEZI) HSP 1 Score: 59.3 bits (142), Expect = 1.560e-8 Identity = 26/56 (46.43%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 22 GMSAVHLAAFHGYSDALEILLEAGADPNAVCDDGETPLHTACTGGSMNCVTLLLNY 189
G SA+H+AA+ G+ +AL++LLEAG DP+ + TPLH AC G ++ V +LL++
Sbjct: 109 GQSALHIAAYKGFDNALKVLLEAGVDPSIKDNWSRTPLHEACWTGKVDTVKILLDH 164
BLAST of mRNA_H-paniculata_contig56783.13218.1 vs. uniprot
Match: A0A251SCX5_HELAN (Putative ankyrin repeat-containing domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SCX5_HELAN) HSP 1 Score: 58.9 bits (141), Expect = 2.030e-8 Identity = 26/57 (45.61%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 22 GMSAVHLAAFHGYSDALEILLEAGADPNAVCDDGETPLHTACTGGSMNCVTLLLNYG 192
G S H+ A+HG+ D + LL AGADPNA+ D+GE+ LH A T C ++L +G
Sbjct: 116 GPSVAHVCAYHGHPDCMRELLLAGADPNAIDDEGESVLHRAVTKKYTECALVILEHG 172
BLAST of mRNA_H-paniculata_contig56783.13218.1 vs. uniprot
Match: UPI001CFB12B7 (ankyrin repeat and SOCS box protein 18 isoform X2 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFB12B7) HSP 1 Score: 58.9 bits (141), Expect = 2.050e-8 Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 19 GGMSAVHLAAFHGYSDALEILLEAGADPNAVCDDGETPLHTACTGGSMNCVTLLLNYGEL 198
GG +A+H A + ++D +E+LL+ GA+PN + +DG PLH T S C LLL YG +
Sbjct: 115 GGKAALHHACENAHTDCVELLLDHGANPNLLTEDGLAPLHLCTTHKSFRCAKLLLKYGAV 174
BLAST of mRNA_H-paniculata_contig56783.13218.1 vs. uniprot
Match: UPI001CF947F5 (ankyrin repeat and SOCS box protein 18 isoform X1 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CF947F5) HSP 1 Score: 58.9 bits (141), Expect = 2.060e-8 Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 19 GGMSAVHLAAFHGYSDALEILLEAGADPNAVCDDGETPLHTACTGGSMNCVTLLLNYGEL 198
GG +A+H A + ++D +E+LL+ GA+PN + +DG PLH T S C LLL YG +
Sbjct: 151 GGKAALHHACENAHTDCVELLLDHGANPNLLTEDGLAPLHLCTTHKSFRCAKLLLKYGAV 210
BLAST of mRNA_H-paniculata_contig56783.13218.1 vs. uniprot
Match: A0A8J4V1Z6_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V1Z6_9MYCE) HSP 1 Score: 58.9 bits (141), Expect = 2.120e-8 Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 22 GMSAVHLAAFHGYSDALE--ILLEAGADPNAVCDDGETPLHTACTGGS--------MNCVTLLLNYG 192
GM+A+H+AAFHGY +AL IL GA+ NA C DG TPL A G S ++C++LLL+ G
Sbjct: 543 GMTALHVAAFHGYPEALNTLILSNGGAEVNAKCKDGSTPLLKATMGASGSESKENSLSCISLLLDKG 609
BLAST of mRNA_H-paniculata_contig56783.13218.1 vs. uniprot
Match: A0A0K9RT99_SPIOL (RING-type E3 ubiquitin transferase n=2 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9RT99_SPIOL) HSP 1 Score: 58.9 bits (141), Expect = 2.140e-8 Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 22 GMSAVHLAAFHGYSDALEILLEAGADPNAVCDDGETPLHTACTGGSMNCVTLLLNYG 192
G S H+ A+HG D + LL AGADPNAV D+GE+ LH A T +C ++L +G
Sbjct: 576 GPSVAHVCAYHGQPDCMRELLIAGADPNAVDDEGESVLHRAITKKYTDCALIILEHG 632
BLAST of mRNA_H-paniculata_contig56783.13218.1 vs. uniprot
Match: A0A371FYN4_MUCPR (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371FYN4_MUCPR) HSP 1 Score: 58.9 bits (141), Expect = 2.140e-8 Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 22 GMSAVHLAAFHGYSDALEILLEAGADPNAVCDDGETPLHTACTGGSMNCVTLLLNYG 192
G S H+ A+HG D ++ LL AGADPNAV D+GE+ LH A S +C ++L G
Sbjct: 568 GPSVAHVCAYHGQPDCMQELLLAGADPNAVDDEGESVLHRAVANKSTDCALVILESG 624
BLAST of mRNA_H-paniculata_contig56783.13218.1 vs. uniprot
Match: A0A7J8STE2_GOSDV (Protein kinase domain-containing protein n=1 Tax=Gossypium davidsonii TaxID=34287 RepID=A0A7J8STE2_GOSDV) HSP 1 Score: 58.5 bits (140), Expect = 2.820e-8 Identity = 27/57 (47.37%), Postives = 35/57 (61.40%), Query Frame = 1
Query: 22 GMSAVHLAAFHGYSDALEILLEAGADPNAVCDDGETPLHTACTGGSMNCVTLLLNYG 192
G S H+ A+HG D + LL AGADPNAV D+GE+ LH A +C ++L YG
Sbjct: 404 GPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGESVLHRAVAKKYTDCALVILEYG 460 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig56783.13218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig56783.13218.1 >prot_H-paniculata_contig56783.13218.1 ID=prot_H-paniculata_contig56783.13218.1|Name=mRNA_H-paniculata_contig56783.13218.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp MSAVHLAAFHGYSDALEILLEAGADPNAVCDDGETPLHTACTGGSMNCVTback to top mRNA from alignment at H-paniculata_contig56783:326..547- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig56783.13218.1 ID=mRNA_H-paniculata_contig56783.13218.1|Name=mRNA_H-paniculata_contig56783.13218.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=222bp|location=Sequence derived from alignment at H-paniculata_contig56783:326..547- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig56783:326..547- >mRNA_H-paniculata_contig56783.13218.1 ID=mRNA_H-paniculata_contig56783.13218.1|Name=mRNA_H-paniculata_contig56783.13218.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=396bp|location=Sequence derived from alignment at H-paniculata_contig56783:326..547- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |